Re: [R] ALLOCATE in a FORTRAN subroutine

Hi Berend, >The question belongs on the R-devel mailinglist. I try to find this mailing-list ... >You are calling your Fortran routines directly from an R file with .Fortran, I >presume? Yes. Is there another solution (possibility ?) >Declare them with (:,:) or (*,*), allocate and the return

Re: [R] package FD

Hi Fabio, You should write: class(...) where ... is the same as what you would type to have the variable displayed on the console. Looking at your earlier message, it might be: x$trait3 so try: class(x$trait3) Jim On Fri, Mar 4, 2016 at 11:30 AM, Fabio Monteiro

Re: [R] Error in upgrading ggplot2

Thanks. I will try both the options 1) another mirror 2) upgrading R, and revert in case of issues. Br / On Fri, Mar 4, 2016 at 10:56 AM, Jeff Newmiller wrote: > The usual thing to try in cases like this is another mirror. > > Another worthwhile step is upgrading

Re: [R-es] Representar datos longitudinales mediante splines

Hola, El suavizado con "lowess()" te da error: > for(i in unique(df$id)) { + lines(lowess(df$x[df$id == i], df$y[df$id == i], col = df$id)) } Error in lowess(df$x[df$id == i], df$y[df$id == i], col = df$id) : unused argument (col = df$id) Y el mensaje de error es bastante explícito.

Re: [R] Error in upgrading ggplot2

The usual thing to try in cases like this is another mirror. Another worthwhile step is upgrading your R software to the latest... if only to comply with the Posting Guide. -- Sent from my phone. Please excuse my brevity. On March 3, 2016 9:33:05 PM PST, Burhan ul haq

[R] Error in upgrading ggplot2

Hi, I was planning to use GGally, which required me to upgrade ggplot2 but despite trying multiple times, I have been unable to do so: The ggplot2 downloads and installs, but when I load it, I get the following message: > library("ggplot2", lib.loc="/usr/local/lib/R/site-library") Error in

[R-es] Fwd: confirm 3d318a03e0b489e0782feadf5364bf2186e9d7b1

confirm 3d318a03e0b489e0782feadf5364bf2186e9d7b1 [[alternative HTML version deleted]] ___ R-help-es mailing list R-help-es@r-project.org https://stat.ethz.ch/mailman/listinfo/r-help-es

Re: [R] package FD

i just called trait3 to my variable. Is this what i'm suppose to wright? class(trait3), or class (my_trait3_variable? both give error 2016-03-03 23:42 GMT+00:00 Jim Lemon : > Hi Fabio, > It is possible that your remaining "numeric" variable is a factor. What > does: > >

Re: [R] Extracting part of a factor

On 03/03/2016 02:13 PM, KMNanus wrote: When I do that, When you do what exactly? It's impossible for anyone here to know what you're doing if you don't show the code. I get "Error in `$<-.data.frame`(`*tmp*`, "site", value = integer(0)) : replacement has 0 rows, data has 6” The data

Re: [R] package FD

Hi Fabio, It is possible that your remaining "numeric" variable is a factor. What does: class(my_numeric_variable) say? (where you substitute the name of your "numeric" variable) Jim On Fri, Mar 4, 2016 at 2:25 AM, Fabio Monteiro wrote: > Hello, my name is Fábio

[R-es] Script con error SOLUCIONADO

Carlos, gracias por tu rápida respuesta. Mira prefiero que aparezcan *todos* los ceros porque de esa manera, me doy cuenta de cuando ocurren valores fuera del rango. Ahora que si se eliminan todos me sirve pero menos. Te repito mi agradecimiento. *MANOLO MÁRQUEZ P.* [[alternative HTML

Re: [R] RSNNS neural network

> On Mar 3, 2016, at 12:33 PM, jake88 wrote: > > Data set attached … rename to mydata.csv . > > > > > > require ( RSNNS ) > mydata = read.csv("mydata.csv",header = TRUE) # Needed to change to mydata.txt > > mydata.train = mydata[3000:1,] > > mydata.test =

Re: [R] Extracting part of a factor

When I did that, I got - "Error in `$<-.data.frame`(`*tmp*`, "site", value = integer(0)) : replacement has 0 rows, data has 6” The data frame has 6 rows. Ken kmna...@gmail.com 914-450-0816 (tel) 347-730-4813 (fax) > On Mar 3, 2016, at 4:14 PM, Ista Zahn wrote: > >

Re: [R] Extracting part of a factor

When I do that, I get "Error in `$<-.data.frame`(`*tmp*`, "site", value = integer(0)) : replacement has 0 rows, data has 6” The data frame has 6 rows. Ken kmna...@gmail.com 914-450-0816 (tel) 347-730-4813 (fax) > On Mar 3, 2016, at 4:52 PM, Hervé Pagès wrote: > >

Re: [R] Extracting part of a factor

Hi, On 03/03/2016 12:18 PM, KMNanus wrote: I have a factor variable that is 6 digits and hyphenated. For example, 001-014. I need to extract the first 3 digits to a new variable using mutate in dplyr - in this case 001 - but can’t find a function to do it. substr will do this for character

Re: [R] Extracting part of a factor

Like this? x <- factor("001-014") y <- substr(as.character(x), 1, 3) Best, Ista On Thu, Mar 3, 2016 at 3:18 PM, KMNanus wrote: > I have a factor variable that is 6 digits and hyphenated. For example, > 001-014. > > I need to extract the first 3 digits to a new variable

Re: [R-es] nueva distribución de R y problema solucionado

Estimados Dos partes, la primera y sin importancia, “por donde van los tiros” de este lado del océano se comprende con una probabilidad del 99,85 % y un error del 0.0032, con R, otro software da error de presupuesto. La parte importante: del comentario Otra de las mejoras que han introducido y

Re: [R-es] Representar datos longitudinales mediante splines

Estimado Francisco Javier Puede realizar eso con xy, o la parte gráfica que prefiera (hay que intentar y se llegaría), pero en su código no veo alguna función de ajuste de curva, spline permite ajustar curvas y fijar algunos puntos, hay varias posibilidades al respecto, debería seleccionar una

[R] Extracting part of a factor

I have a factor variable that is 6 digits and hyphenated. For example, 001-014. I need to extract the first 3 digits to a new variable using mutate in dplyr - in this case 001 - but can’t find a function to do it. substr will do this for character strings, but I need the variable to remain as

Re: [R-es] problema al importar una BD que esta en formato de SPSS

Perfecto, muchas gracias Javier. Saludos, Eric. On 03/03/2016 02:36 AM, Javier Marcuzzi wrote: Estimado Eric Recién veo este sitio, nunca importe SPSS, no puedo compartir experiencia al respecto más que enviarle el link por si lo cree útil. https://github.com/hadley/haven Javier Rubén

Re: [R] RSNNS neural network

> On Mar 3, 2016, at 10:30 AM, jake88 wrote: > > Data set attached … Perhaps it was, and if you replied-all then it might be in the copy that was sent directly to Charles, but it was not attached after the rhelp mail-server scrubbed it. It wasn't labeled correctly by

Re: [R] estimate likelihood

Not possible, because the hessian is singular. Recoded as follows (your code should be executable before you put it in a help request). # asindii2.R -- Is it possible to estimate the likelihood parameter #and test for significant as follows: x <- c(1.6, 1.7, 1.7, 1.7, 1.8, 1.8, 1.8, 1.8) y

Re: [R] RSNNS neural network

Data set attached … require ( RSNNS ) mydata = read.csv("mydata.csv",header = TRUE) mydata.train = mydata[3000:1,] mydata.test = mydata[10005:10006,] myfit <- elman ( mydata.train[,2:19],mydata.train[,1], size =100 , learnFuncParams =c (0.1) , maxit =1000) pred <-predict (myfit ,

[R] estimate likelihood

Hi all, Is it possible to estimate the likelihood parameter and test for significant as follows: x <- c(1.6, 1.7, 1.7, 1.7, 1.8, 1.8, 1.8, 1.8) y <- c( 6, 13, 18, 28, 52, 53, 61, 60) n <- c(59, 60, 62, 56, 63, 59, 62, 60) # note: there is no need to have the choose(n, y) term in the likelihood

Re: [R] splAw: RE: discriminant analysis lda under MASS

I think the answer is in Venables and Ripley, Modern Applied Statistics with S. 4th Edition, 2002, page 332: "Fisher (1936) introduced a linear discriminant analysis seeking a linear combination xa of the variables that has a maximal ratio of the separation of the class means to the

Re: [R] Ruofei Mo - How can I generate correlated data with non-normal distribution?

Ruofei, Ben's suggestion is simple and gets you close: require(MASS) nsim <- 100 rho <- -.9 Z <- mvrnorm(nsim, mu=c(0,0),Sigma = cbind(c(1,rho),c(rho, 1))) U <- pnorm(Z); a <- Z[,1] b <- qunif(U[,2]) cor(a,b) Pearson correlation characterizes the linear relationship between normal r.v.'s,

Re: [R] ALLOCATE in a FORTRAN subroutine

> On 3 Mar 2016, at 13:57, MAURICE Jean - externe > wrote: > > Hi, > I am 'translating' R functions in FORTRAN subroutines. > > Very often, an R function gives an 'array' as result and you don't have to > bother with the dimension of the array : R creates

[R] Polytonic Vector Analysis

I'm looking for an R package to do Polytopic Vector Analysis (PVA) without success. I've checked CRAN, then did a site searched there, scanned the packages list, looked over old Help posting (there was a query about the same back in 2005 or so - only one response that didn’t give much direction

[R] package FD

Hello, my name is Fábio and I'm a Marine Ecology student in Portugal. I'm currently using the FD package for my work and yesterday one message appeared that I wasn't expecting and I really need your help to try to figure out what's happening. I'm using the dbFD function and the following message

Re: [R] PCA on SNP genotypes

Mohsen, Check at Bioconductor. Andrés > El 03/03/2016, a las 9:43, Mohsen Jafarikia escribió: > > Hello everyone: > > I have about a couple of thousands of samples each with about 100 SNP > genotypes and I would like to do PCA using genotypes. I looked on the > web and

[R] PCA on SNP genotypes

Hello everyone: I have about a couple of thousands of samples each with about 100 SNP genotypes and I would like to do PCA using genotypes. I looked on the web and found different options available on R for PCA. I was wondering if I could have advice about the program fits better what I am trying

Re: [R] Problem installing packages: cannot open file '/sw/Library/Frameworks/R.framework/Versions/3.2/Resources/etc/Makeconf'

Dear David, Thank you very much! I am sending this mail for the record. I am on mac OSX 10.8.5. The "standard" binary installer packages worked and fixed the problem (R-3.2.1-snowleopard.pkg, RStudio 0.99.891 - Mac OS X 10.6+ (64-bit)). So, a caution against fink (r-base and rstudio-desktop)

[R-es] Suscripcion a ayudas en español

Hola me interesa suscribirme a las ayudas en español, estoy siguiendo un curso de coursera y quiero acceder a las ayudas en mi idioma. Gracias -- Tony Castillo Calzadilla, Universidad de Deusto, Bilbao [[alternative HTML version deleted]] ___

Re: [R] discriminant analysis lda under MASS

Thank you for your answer. Please let me provide additional information:   You have a pooled variance covariance matrix S (2x2). The matrix needs to be inverted: S^-1. The calculation of the coeffcients is done by S^-1 (average (x1) - average (x2)). average (x1) is the vector of means (2x1) in

Re: [R] RSNNS neural network

Unfortunately we can only provide so much help without a reproducible example. Can you use a dataset that everyone would have access to to reproduce the problem? Otherwise it is difficult for anyone to help you. Regards, Charles On Tue, Mar 1, 2016 at 12:35 AM, jake88

Re: [R] Namespace problem with pre-R 3.0.0 package

Le 03/03/2016 03:02 PM, Marc Schwartz a écrit : On Mar 3, 2016, at 7:40 AM, Sebastien Moretti wrote: Hi I have issues with an R package developed in 2004. It works perfectly in R < 3. It can be installed in R > 3 but functions are not in the namespace. Do you

Re: [R] Namespace problem with pre-R 3.0.0 package

> On Mar 3, 2016, at 7:40 AM, Sebastien Moretti > wrote: > > Hi > > I have issues with an R package developed in 2004. > It works perfectly in R < 3. > It can be installed in R > 3 but functions are not in the namespace. > > Do you know a good - and simple -

Re: [R] discriminant analysis lda under MASS

If the textbook provides the equations, you can work through them directly. But without knowing more, it is hard to say. You could also contact the author of the textbook. - David L Carlson Department of Anthropology Texas A University College Station, TX

Re: [R] Unicode Text Segmentation Algorithms already implemented in R?

You searched, but did not tell us what you found, nor why it was unsuitable for you undescribed use case. So all we can do is guess: my guess is http://docs.rexamine.com/R-man/stringi/stringi-search-boundaries.html Best, Ista On Mar 3, 2016 8:14 AM, "Sascha Wolfer" wrote:

[R] Namespace problem with pre-R 3.0.0 package

Hi I have issues with an R package developed in 2004. It works perfectly in R < 3. It can be installed in R > 3 but functions are not in the namespace. Do you know a good - and simple - documentation to help me to solve that? I have already fixed some problems with R CMD check but remaining

[R] Unicode Text Segmentation Algorithms already implemented in R?

Hello list members, I am looking for an implementation of Unicode text segmentation (word boundary detection) algorithms in R. You can find information about the algorithms here: http://www.unicode.org/reports/tr29/#Word_Boundaries The help page for the function ‚casefuns‘ from the excellent

[R] ALLOCATE in a FORTRAN subroutine

Hi, I am 'translating' R functions in FORTRAN subroutines. Very often, an R function gives an 'array' as result and you don't have to bother with the dimension of the array : R creates automatically an array with the good length. It's not really the case with FORTRAN. Until now, I create an

Re: [R] Extract row form a dataframe by row names in another vector and factor . Need explanation

Dear Dennis Thank you very much for your detail reply . It was really helpful to understand. Tanvir Ahamed Göteborg, Sweden | mashra...@yahoo.com From: Dennis Murphy Sent: Thursday, 3 March 2016, 4:38 Subject: Re: [R] Extract row

Re: [R-es] Script con error SOLUCIONADO

Hola, Pero, ¿qué es lo que quieres hacer? - ¿Que por un lado vaya contando las veces que el valor no es mayor que cinco y lo vaya guardando en sma? - ¿Y cuando el valor sea mayor, guarde un cero?.. Gracias, Carlos. El 3 de marzo de 2016, 7:47, Manuel Máquez