Hi!
2019-02-27 22:51 -0500, Aimin Yan wrote:
> I have a question about assigning color based on the value of a
> matrix
>
> The following is my matrix.
>
> d
> lateRT earlyRT NAD ciLAD
> lateRT 1.0 0.00 0.006224017 0.001260241
> earlyRT
The attached is the heatmap.
Thank you,
Aimin
On Wed, Feb 27, 2019 at 10:51 PM Aimin Yan wrote:
> I have a question about assigning color based on the value of a matrix
>
> The following is my matrix.
>
> d
> lateRT earlyRT NAD ciLAD
> lateRT 1.0
I have a question about assigning color based on the value of a matrix
The following is my matrix.
d
lateRT earlyRT NAD ciLAD
lateRT 1.0 0.00 0.006224017 0.001260241
earlyRT 0.0 1.00 0.001425649 0.007418436
NAD 0.006224017
The inverse of which() would have to know the length of the logical vector
to create. The function could be
invWhich <- function(whichTrue, length) {
stopifnot(length <= max(whichTrue), !anyNA(whichTrue))
v <- logical(length)
v[whichTrue] <- TRUE
v
}
It isn't
I have loaded the profvis library but the function parse_ rprof() is
absent.
below is the session info show the absence of the function ( which is
listed in the package help for the current version.)
Documentation for package ‘profvis’ version 0.3.5
DESCRIPTION file.
Help Pages
parse_rprof
I'm facing the same problem of late, and I do not know what instigated the
behavior. Using the company mode setting below has not solved my help dump,
which is in fact highly annoying. This is my setup (on Antergos / Mac OS) :
(require 'ess)
(require 'ess-R-data-view)
(setq
Hi,
I'm not very clear on what you are trying to achieve, but I think you could try
the following for your Q1...
> Q1: Please how do I generate many samples as x above, say up to 5000
> or 10,000? I manually generated and stored as x1,x2, x3 up to x100.
ndta = nrow(dta)
x0 = 8890
x1 = 9500
xx
Thanks
Bernard
Sent from my iPhone so please excuse the spelling!"
> On Feb 27, 2019, at 4:05 PM, Duncan Murdoch wrote:
>
>> On 27/02/2019 3:55 p.m., Bernard Comcast wrote:
>> What is the recommended way to trap errors in R? My main need is to be able
>> to trap an error and then skip a
use grepl?
On February 27, 2019 3:03:27 PM PST, Ed Siefker wrote:
>Given a vector of booleans, chich() will return indices that are TRUE.
>
>Given a vector of indices, how can I get a vector of booleans?
>
>My intent is to do logical operations on the output of grep(). Maybe
>there's a better
I'm not sure I completely understand your question. Would using grepl() instead
of grep() let you do what you want?
David L Carlson
Department of Anthropology
Texas A University
College Station, TX 77843-4352
-Original Message-
From: R-help On
Given a vector of booleans, chich() will return indices that are TRUE.
Given a vector of indices, how can I get a vector of booleans?
My intent is to do logical operations on the output of grep(). Maybe
there's a better way to do this?
Thanks
-Ed
__
Dear Kind List,
I am still battling with this. I have, however, made some progress
with the suggestions of Micheal and others. At least, I have a better
picture of what I want to do now as I will attempt a detailed
description here.
I am aware I should show you just a small part of my code and
On Wed, 27 Feb 2019, William Dunlap wrote:
Did you use 'R CMD ldd .../later.so', as I recommended?
Bill,
I ran ldd externally on /usr/lib/R/library/lib/later/later.so and posted the
missing library. Just now I ran the above command and it did not find
later.so:
# R CMD ldd
Did you use 'R CMD ldd .../later.so', as I recommended?
Bill Dunlap
TIBCO Software
wdunlap tibco.com
On Wed, Feb 27, 2019 at 12:51 PM Rich Shepard
wrote:
> On Wed, 27 Feb 2019, William Dunlap wrote:
>
> > The package will not load. The only reason to do test load is to examine
> > why the
Hello,
You can trap errors with ?try or ?tryCatch.
Example:
result <- vector(mode = "list", length = 5)
for(i in 1:5){
result[[i]] <- tryCatch(if(i == 3) stop("This is an error") else 2*i + 1,
error = function(e) e)
}
result
for(i in seq_along(result)) {
err <-
On 27/02/2019 3:55 p.m., Bernard Comcast wrote:
What is the recommended way to trap errors in R? My main need is to be able to
trap an error and then skip a section of code if an error has occurred. In VB
for Excel I used the “On Error goto .” construct to do this.
The recommended way
What is the recommended way to trap errors in R? My main need is to be able to
trap an error and then skip a section of code if an error has occurred. In VB
for Excel I used the “On Error goto .” construct to do this.
Bernard
Sent from my iPhone so please excuse the spelling!"
On Wed, 27 Feb 2019, William Dunlap wrote:
The package will not load. The only reason to do test load is to examine
why the package's .so file cannot be loaded. We know there is at least one
function or data symbol that it cannot find, __atomic_fetch_add_8, which
may be from boost::atomic. The
The package will not load. The only reason to do test load is to examine
why the package's .so file cannot be loaded. We know there is at least one
function or data symbol that it cannot find, __atomic_fetch_add_8, wihch
may be from boost::atomic. The ldd command may give some hints about
On Wed, 27 Feb 2019, William Dunlap wrote:
The syntax is either
install.packages("later", type="source", INSTALL_opts="--no-test-load")
from within R (perhaps with repos=NULL if from a local directory) or
R CMD INSTALL --no-test-load later
from outside of R, where 'later' must be a
Using the syntax 'install.packages("later") --no-test-load'
The syntax is either
install.packages("later", type="source", INSTALL_opts="--no-test-load")
from within R (perhaps with repos=NULL if from a local directory) or
R CMD INSTALL --no-test-load later
from outside of R, where
On Wed, 27 Feb 2019, William Dunlap wrote:
Add the --no-test-load option to the install command and the unloadable .so
file should be left there so you can look at its dependencies with, e.g.,
'R CMD ldd .../libs/later.so'.
Bill,
Using the syntax 'install.packages("later") --no-test-load'
Add the --no-test-load option to the install command and the unloadable .so
file should be left there so you can look at its dependencies with, e.g.,
'R CMD ldd .../libs/later.so'.
Bill Dunlap
TIBCO Software
wdunlap tibco.com
On Wed, Feb 27, 2019 at 9:40 AM Rich Shepard
wrote:
> On Wed, 27
On Wed, 27 Feb 2019, Rainer Krug wrote:
I am sure, you have uninstalled the package completely and tried it again?
Rainer,
Yes. Just did so with the same result: R could not load the shared library.
Have you tried at looking at the shared objects required by
Hı Wolfgangş
I do appreciate for this info. Very helpful. And I do apologize for the
personal email. It was done mistakenly.
Regards,
Greg
On Wed, Feb 27, 2019 at 5:42 AM Viechtbauer, Wolfgang (SP) <
wolfgang.viechtba...@maastrichtuniversity.nl> wrote:
> Hi Greg,
>
> Please cc the mailing
On Wed, 27 Feb 2019, Rainer Krug wrote:
I am sure, you have uninstalled the package completely and tried it again?
Have you tried at looking at the shared objects required by `
/usr/lib/R/library/later/libs/later.so` using ldd ?
I had similar problems on Mac (with other packages) and
Hi Greg,
Please cc the mailing list when responding.
No, this is not correct. The argument 'vi' is for the *variances*, not the
standard errors. So, either use:
res <- rma(HR, sei=SE, data=a, method="REML", slab=paste(a$study), digits=3)
or
res <- rma(HR, vi=SE^2, data=a, method="REML",
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