[R] readaff() problem

2015-10-12 Thread Amit Sengupta via R-help
Hi,I am having a problem with the ReadAffy() in the university R programming environment. I install affyPLM and invoke library(affyPLM) in the following way. I have the cel files in the craig subdirectory. Please let me know how to resolve the problem.Amit

[R] preprocessing problem

2015-10-05 Thread Amit Sengupta via R-help
Hi,I am having a problem with the ReadAffy() in the university R programming environment. I install affyPLM and invoke library(affyPLM) in the following way. I have the cel files in the craig subdirectory. Please let me know how to resolve the problem.Amit

[R] cv.glm problem

2016-06-15 Thread Amit Sengupta via R-help
HI,I am analyzing a risk model for type 2 diabetes using a logistic regression. In the final model I have only 6 predictors. The regression gives correct output (fullmod is the fitted model). Now I have a subset of dataset (mydata1) with 7 variables (1 response(0/1) + 6 predictors) and try to

[R] cv.binary problem

2016-06-15 Thread Amit Sengupta via R-help
HI,I am analyzing a risk model for type 2 diabetes using a logistic regression. In the final model I have only 6 predictors. The regression gives correct output (fullmod is the fitted model). Now I  try to do cross validation using cv.binary. Any help in resolving this problem will be

[R] memory problem

2017-05-02 Thread Amit Sengupta via R-help
Hi,I was unable to read a 2.4 gig file into an R object using read.table in 64 bit R environment. Please let me have your suggestions.Amit Sengupta [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and

[R] memory issue

2017-05-02 Thread Amit Sengupta via R-help
HI,I am unable to read a 2.4 gig file into a table (using read.table) in a 64 bit R environment. Do you have any suggestions?Amit [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see