Re: [R] Convert to integers all entries of a table (for DESeq2)

2014-05-14 Thread Alicia R . Pérez-Porro
Sorry, I am pretty new using R. Here is my code to read the table: library(DESeq2) setwd(~/Dropbox/TESIS/DGEA_2.0/Chapter_4_thesis/DE_analysis/DESeq2) matrix = read.table (file.choose(), header=TRUE, row.names=1) CeleDesign - data.frame( row.names = colnames(matrix), condition = factor(c(SP,

[R] Convert to integers all entries of a table (for DESeq2)

2014-05-12 Thread Alicia R . Pérez-Porro
Dear R users, I have a .txt table that looks like: transcript_ID C3C4 CRL_2APR10 CRL_1_15JUL11 CRL_2_15JUL11 C1 CRL_6OCT11c CRL_3DEC11 CRL_13DEC11b LRV_A LRV_B c101054_g1_i2 15.53 231.47 131.86 218.69 16.70 0.00 587.79 0.00 624.32 10.00 6.00 c96583_g1_i2 0.00

[R] Fwd: Convert to integers all entries of a table (for DESeq2)

2014-05-12 Thread Alicia R . Pérez-Porro
Dear R users, I have a .txt table that looks like: transcript_ID C3C4 CRL_2APR10 CRL_1_15JUL11 CRL_2_15JUL11 C1 CRL_6OCT11c CRL_3DEC11 CRL_13DEC11b LRV_A LRV_B c101054_g1_i2 15.53 231.47 131.86 218.69 16.70 0.00 587.79 0.00 624.32 10.00 6.00 c96583_g1_i2 0.00