[R] Repeatability Analysis of Ordinal Data

2022-02-01 Thread Sidoti, Salvatore
Greetings, Colleagues: I have several Likert-type ordinal data sets consisting of animal responses with repeated measures. I was able to implement a CLMM model easily enough with the package `ordinal`. However, the package does not support repeatability analyses. Assuming that I subset my

[R] Data With Ordinal Responses: Calculate ICC & Assessing Model Fit

2020-08-17 Thread Sidoti, Salvatore A.
To begin with, I'm not a fan of cross-posting. However, I posted my question on Stack Exchange more than two weeks ago, but I have yet to receive a sufficient answer: https://stats.stackexchange.com/questions/479600/data-with-ordinal-responses-calculate-icc-assessing-model-fit Here's what

[R] Interpolating Splines: Equidistant Points

2016-12-28 Thread Sidoti, Salvatore A.
I am attempting to smooth the jagged paths of animal tracks to determine their distances with greater accuracy. The data is in the form of (x,y) 2D coordinates. My end goal is to produce a set of interpolating points whereby their Cartesian distances are equal to each other. So far, I have been

Re: [R] Principle Component Analysis: Ranking Animal Size Based On Combined Metrics

2016-11-14 Thread Sidoti, Salvatore A.
e interval: -0.9104585 -0.7407939 sample estimates: cor -0.8458024 Salvatore A. Sidoti PhD Student Behavioral Ecology -Original Message- From: David L Carlson [mailto:dcarl...@tamu.edu] Sent: Monday, November 14, 2016 11:07 AM To: Sidoti, Salvatore A. <sidoti...@buckeyemail.osu.ed

Re: [R] Principle Component Analysis: Ranking Animal Size Based On Combined Metrics

2016-11-13 Thread Sidoti, Salvatore A.
ginal Message- From: Jim Lemon [mailto:drjimle...@gmail.com] Sent: Sunday, November 13, 2016 3:53 PM To: Sidoti, Salvatore A. <sidoti...@buckeyemail.osu.edu>; r-help mailing list <r-help@r-project.org> Subject: Re: [R] Principle Component Analysis: Ranking Animal Size Based

[R] Principle Component Analysis: Ranking Animal Size Based On Combined Metrics

2016-11-13 Thread Sidoti, Salvatore A.
Let's say I perform 4 measurements on an animal: three are linear measurements in millimeters and the fourth is its weight in milligrams. So, we have a data set with mixed units. Based on these four correlated measurements, I would like to obtain one "score" or value that describes an

[R] Spicing Up Native Circular Plot Using ggplot2

2016-05-01 Thread Sidoti, Salvatore A.
I have some angle data from an animal behavior study that I would like to plot for publication using ggplot2. What follows is my current workflow with some example data. ### BEGIN SCRIPT ### ### Create two data frames of random Cartesian coordinates ### df1 <- data.frame( x = sample(10, 11,

[R] Splitting Numerical Vector Into Chunks

2016-04-20 Thread Sidoti, Salvatore A.
Greetings! I have several large data sets of animal movements. Their pauses (zero magnitude vectors) are of particular interest in addition to the speed distributions that precede the periods of rest. Here is an example of the kind of data I am interested in analyzing: x <-

[R] Nested Avova: Unequal # of Observations

2015-12-21 Thread Sidoti, Salvatore A.
I have two experimental groups (treatment & control) with 6 sets of observations nested within each group. The number of observations in each set is not equal. How do I set up a such an ANOVA in R? Thank You! Salvatore Sidoti PhD Student Graduate Teaching Assistant [[alternative

Re: [R] Hexbin: Counting Bins That Meet Certain Criteria

2015-12-17 Thread Sidoti, Salvatore A.
4 5 6 7 8 159 60 33 16 6 1 2 1 > sum(xy.hex@count >= 3) [1] 59 - David L Carlson Department of Anthropology Texas A University College Station, TX 77840-4352 -Original Message- From: R-help [mailto:r-help-boun...@r-project.org

[R] Converting from Continuous 2D Points to Continuous 2D Vectors

2015-12-17 Thread Sidoti, Salvatore A.
Greetings! I have a fairly large dataframe (df) with pathing information in the form of continuous x,y coordinates: df$x df$y With these data, I would like to: 1. Calculate a set of continuous vectors 2. Determine the angle between each of these vectors (in degrees) 3. Count the number of

[R] Hexbin: Counting Bins That Meet Certain Criteria

2015-12-14 Thread Sidoti, Salvatore A.
Greetings! Is there a way to count the bins in a hexbin plot that meet certain criteria? For instance, what if I wanted to count the bins (hexes) that have a datapoint density of some number x? Thank you! __ R-help@r-project.org mailing list -- To