Re: [R] Query about wilcox.test() P-value

2010-07-15 Thread Govind Chandra
Thanks to Peter Konings, Peter Ehlers, Marc Schwartz and Peter Dalgaard my query has been satifactorily addressed. Govind __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide

[R] Query about wilcox.test() P-value

2010-07-14 Thread Govind Chandra
Hi, I find that the p-value printed out by wilcox.test() and the p-value stored in the p.value attribute in the object returned by wilcox.test() are not the same. There seems to be a lower limit of 2.2e-16 for the printed value although it does say that it is less than that. What I want to know

Re: [R] Query about wilcox.test() P-value

2010-07-14 Thread Peter Ehlers
On 2010-07-14 3:53, Govind Chandra wrote: Hi, I find that the p-value printed out by wilcox.test() and the p-value stored in the p.value attribute in the object returned by wilcox.test() are not the same. There seems to be a lower limit of 2.2e-16 for the printed value although it does say that

Re: [R] Query about wilcox.test() P-value

2010-07-14 Thread Govind Chandra
Hi Peter, Thanks for your response. Yes, I am interested in P-values smaller than 1e-16. Below a certain value they may not tell much about significance but are useful for ordering (ranking), for example, differentially expressed genes in microarray data. Something similar is done by sequence

Re: [R] Query about wilcox.test() P-value

2010-07-14 Thread Marc Schwartz
You need to understand the difference between how a value is stored in an R object with full floating point precision versus how a value in R is displayed (printed) in the console with a print method. In this case, wilcox.test() returns an object of class 'htest' (as noted in the Value section

Re: [R] Query about wilcox.test() P-value

2010-07-14 Thread Peter Dalgaard
Marc Schwartz wrote: You need to understand the difference between how a value is stored in an R object with full floating point precision versus how a value in R is displayed (printed) in the console with a print method. In this case, wilcox.test() returns an object of class 'htest' (as