Re: [R] plotting multiple animal tracks against Date/Time

2010-09-29 Thread Gabor Grothendieck
On Wed, Sep 29, 2010 at 7:52 AM, Struve, Juliane j.str...@imperial.ac.uk wrote: I will post the example again to see if its readable now. My question is why does read.zoo(file=filenames,) work and  lapply(filenames, read.zoo,...) does not ? Since I am reading the same file in both

Re: [R] plotting multiple animal tracks against Date/Time

2010-09-29 Thread Struve, Juliane
)) From: Gabor Grothendieck [ggrothendi...@gmail.com] Sent: 29 September 2010 00:09 To: Struve, Juliane Cc: r-help@r-project.org Subject: Re: [R] plotting multiple animal tracks against Date/Time On Tue, Sep 28, 2010 at 9:30 AM, Struve, Juliane j.str...@imperial.ac.uk

Re: [R] plotting multiple animal tracks against Date/Time

2010-09-29 Thread Dennis Murphy
, Juliane Cc: r-help@r-project.org Subject: Re: [R] plotting multiple animal tracks against Date/Time On Tue, Sep 28, 2010 at 9:30 AM, Struve, Juliane j.str...@imperial.ac.uk wrote: Hi, in this self-contained example the file the same error message appears as when I read in my original

Re: [R] plotting multiple animal tracks against Date/Time

2010-09-28 Thread Struve, Juliane
. Juliane Sorry for posting twice, libraries were missing earlier. From: Gabor Grothendieck [ggrothendi...@gmail.com] Sent: 27 September 2010 23:32 To: Struve, Juliane Cc: r-help@r-project.org Subject: Re: [R] plotting multiple animal tracks against Date/Time

Re: [R] plotting multiple animal tracks against Date/Time

2010-09-28 Thread Gabor Grothendieck
On Tue, Sep 28, 2010 at 9:30 AM, Struve, Juliane j.str...@imperial.ac.uk wrote: Hi, in this self-contained example the file the same error message appears as when I read in my original results files. library (zoo) library(chron) #generate example data Fish_ID=1646  Date - 01/01/2004

Re: [R] plotting multiple animal tracks against Date/Time

2010-09-27 Thread Gabor Grothendieck
On Mon, Sep 27, 2010 at 10:01 AM, Struve, Juliane j.str...@imperial.ac.uk wrote: Hi, I am sorry that my question wasn not very clearly formulated.  My real data comes in 47 .csv files, one for each of 47 individual, for example: ,Fish_ID,Date,R2sqrt 1,1646,2006-08-18 08:48:59,0

Re: [R] plotting multiple animal tracks against Date/Time

2010-09-27 Thread Struve, Juliane
} z - na.approx(cbind(???), na.rm = FALSE) plot(z) From: Gabor Grothendieck [ggrothendi...@gmail.com] Sent: 24 September 2010 22:08 To: Struve, Juliane Cc: r-help@r-project.org Subject: Re: [R] plotting multiple animal tracks against Date/Time On Fri, Sep 24, 2010 at 4:16 PM, Struve

Re: [R] plotting multiple animal tracks against Date/Time

2010-09-27 Thread Gabor Grothendieck
On Mon, Sep 27, 2010 at 5:38 PM, Struve, Juliane j.str...@imperial.ac.uk wrote: Hello, thank you very much for replying. The code yields an error message Error in strptime(x, format, tz = tz) : invalid 'x' argument But I can't see what's wrong with it, the Date/Time info  is in the third

Re: [R] plotting multiple animal tracks against Date/Time

2010-09-27 Thread Struve, Juliane
From: Gabor Grothendieck [ggrothendi...@gmail.com] Sent: 27 September 2010 15:23 To: Struve, Juliane Cc: r-help@r-project.org Subject: Re: [R] plotting multiple animal tracks against Date/Time On Mon, Sep 27, 2010 at 10:01 AM, Struve, Juliane j.str...@imperial.ac.uk wrote

Re: [R] plotting multiple animal tracks against Date/Time

2010-09-24 Thread Struve, Juliane
://www.aquaticresources.org/ From: Gabor Grothendieck [ggrothendi...@gmail.com] Sent: 23 September 2010 23:06 To: Struve, Juliane Cc: r-help@r-project.org Subject: Re: [R] plotting multiple animal tracks against Date/Time On Thu, Sep 23, 2010 at 5:53 PM, Struve, Juliane

Re: [R] plotting multiple animal tracks against Date/Time

2010-09-24 Thread Struve, Juliane
September 2010 18:26 To: Struve, Juliane Cc: r-help@r-project.org Subject: Re: [R] plotting multiple animal tracks against Date/Time On Thu, Sep 23, 2010 at 9:50 AM, Struve, Juliane j.str...@imperial.ac.uk wrote: Dear list, I would like to create a time series plot in which the paths of several

Re: [R] plotting multiple animal tracks against Date/Time

2010-09-24 Thread Gabor Grothendieck
On Fri, Sep 24, 2010 at 4:16 PM, Struve, Juliane j.str...@imperial.ac.ukwrote: Hi again, when applying the code to my real data I need to deal with a large number of individuals and massive data sets. I am using the code below to read in the data for different individuals, and would like to

Re: [R] plotting multiple animal tracks against Date/Time

2010-09-24 Thread Struve, Juliane
23:06 To: Struve, Juliane Cc: r-help@r-project.org Subject: Re: [R] plotting multiple animal tracks against Date/Time On Thu, Sep 23, 2010 at 5:53 PM, Struve, Juliane j.str...@imperial.ac.ukmailto:j.str...@imperial.ac.uk wrote: Hello, thank you very much for replying. I have tried this, but I get

[R] plotting multiple animal tracks against Date/Time

2010-09-23 Thread Struve, Juliane
Dear list, I would like to create a time series plot in which the paths of several individuals are stacked above each other, with the x-axis being the total observation period of three years ( 1.1.2004 to 31.12.2007) and the y-axis being some defined range[min,max]. My data consist of

[R] Plotting multiple animal tracks against Date/Time

2010-09-23 Thread Struve, Juliane
Sorry for posting this questions twice, but my previous question was accidentally sent unfinished. Dear list, I would like to create a time series plot in which the paths of several individuals are stacked above each other, with the x-axis being the total observation period of three years (

Re: [R] plotting multiple animal tracks against Date/Time

2010-09-23 Thread Mike Rennie
By range on the y-axis, do you mean distance? It would have to be if time is on your x? Or am I misreading this? You could just plot() with the data for your first individual, and then add additional individuals after that using lines(), specifying a different colour and/or line type for each

Re: [R] plotting multiple animal tracks against Date/Time

2010-09-23 Thread Gabor Grothendieck
On Thu, Sep 23, 2010 at 9:50 AM, Struve, Juliane j.str...@imperial.ac.uk wrote: Dear list, I would like to create a time series plot in which the paths of several individuals are stacked above each other, with the x-axis being the total observation period of three years ( 1.1.2004 to

Re: [R] Plotting multiple animal tracks against Date/Time

2010-09-23 Thread Jonathan Christensen
Include individual as a factor in your dataset, and use ggplot2: library(ggplot2) ggplot(aes(x=Date, y=Distance, color=Individual), data=data) + geom_line() ought to do it. Jonathan On Thu, Sep 23, 2010 at 9:31 AM, Struve, Juliane j.str...@imperial.ac.ukwrote: Sorry for posting this

Re: [R] plotting multiple animal tracks against Date/Time

2010-09-23 Thread Gabor Grothendieck
On Thu, Sep 23, 2010 at 5:53 PM, Struve, Juliane j.str...@imperial.ac.ukwrote: Hello, thank you very much for replying. I have tried this, but I get error message Error in .subset(x, j) : invalid subscript type 'list' after z1 - read.zoo(textConnection(Lines1), skip = 1, index = list(1,