Re: [R] Intrduction of function

2004-09-24 Thread Uwe Ligges
wrote: Hi all: I've written a function and saved the worksapce.When the workspace of my function is re-open,I want display some introduction or step by step guidance of the function for the users.How can I do it? Thanks a lot! ??, you don't want to do distribute a workspace, but you want to

Re: [R] How to improve the quality of curve/line plots?

2004-09-24 Thread Uwe Ligges
Wolf, Michael wrote: Dear list, I'm using the windows version of R. When plotting a curve or a line for time series with annual data , e. g. GDP growth 1991-2003, the line seems to exist of a lot of smaller lines. Printing the results the curves and lines seems to be unclean (because of using

AW: [R] How to improve the quality of curve/line plots?

2004-09-24 Thread Wolf, Michael
Thanks for the tip using a smoothing technique before plotiing in order to get a curve instead of a line connecting the observations. But that's not the solution for my main problem with the unclean line plot. In order to show my problem let's take this simple example: xval - c(1, 2, 3, 4, 5,

Re: AW: [R] How to improve the quality of curve/line plots?

2004-09-24 Thread Arne Henningsen
On Friday 24 September 2004 09:35, Wolf, Michael wrote: Thanks for the tip using a smoothing technique before plotiing in order to get a curve instead of a line connecting the observations. But that's not the solution for my main problem with the unclean line plot. In order to show my problem

Re: AW: [R] How to improve the quality of curve/line plots?

2004-09-24 Thread Uwe Ligges
Wolf, Michael wrote: Thanks for the tip using a smoothing technique before plotiing in order to get a curve instead of a line connecting the observations. But that's not the solution for my main problem with the unclean line plot. In order to show my problem let's take this simple example: xval

Re: AW: [R] How to improve the quality of curve/line plots?

2004-09-24 Thread Roger Bivand
On Fri, 24 Sep 2004, Wolf, Michael wrote: Thanks for the tip using a smoothing technique before plotiing in order to get a curve instead of a line connecting the observations. But that's not the solution for my main problem with the unclean line plot. In order to show my problem let's take

Re: AW: [R] How to improve the quality of curve/line plots?

2004-09-24 Thread Angel Lopez
I posted a similar question while ago: http://tolstoy.newcastle.edu.au/R/help/04/03/0590.html with not much success. The only replies I recieved were in private, the one i keep in my inbox is: Is this just a rasterization effect? i.e., a conceptually smooth line looks jagged because the screen

AW: AW: [R] How to improve the quality of curve/line plots?

2004-09-24 Thread Wolf, Michael
Thanks for your help. When testing your examples and hints I saw that printing the graph results in a better (optimal) appearance of the line. Consequently, the postscript command will lead to clean line appearances using a high resolution/quality printer. At least, that's the decisive point in

[R] anova and post hoc multicomparison tests

2004-09-24 Thread BLANCHER Guillaume
Hello everyone, Like a lot of people, I have been looking for functions in R doing ANOVA (ok) and performing multicomparisons (like Student-Newman-Keuls, etc.). As I have been a little bit disappointed, I have bee looking through the net for such open source softwares. I found one in:

[R] (sem assunto)

2004-09-24 Thread Miguel Ribeiro
Hello, how can i prepare the data for study a matrix with 360 rows x 15 columns with Statis?!? Is it necessary to run other analysis before Statis? If so, how can i use multiple correspondence analysis?? Can you help me?? I'm desperate, thank you for your help. Miguel Ribeiro Portugal

RE: AW: [R] How to improve the quality of curve/line plots?

2004-09-24 Thread Ted Harding
On 24-Sep-04 Wolf, Michael wrote: Thanks for the tip using a smoothing technique before plotiing in order to get a curve instead of a line connecting the observations. But that's not the solution for my main problem with the unclean line plot. In order to show my problem let's take this

Re: [R] RMySQL and Blob

2004-09-24 Thread Sean Davis
Jonathan, Just a suggestion, but why not just export the images to disk, save a URL to them, and do your queries as a two-step process. 1) get URL and 2) load URL. This seems to solve both problems. You just add a table to the MySQL database with the urls, fast and easy to work with, and

RE: [R] block statistics with POSIX classes

2004-09-24 Thread Petr Pikal
Hi You are probably mixing several things together. Are your data time series? What does is.ts(y) tell you? Is the result TRUE? In thet cas your construction aggregate(y, 1, mean) can work. A by argument has to be list in case of aggregate. Is it? So please try to read help pages to any

[R] fix and edit don't work the expected way

2004-09-24 Thread Thomas Schnhoff
Hello, I am tinkering a bit with options(), namely, how to query and set them up to suit my needs. 1) The basic problem seems that the editor entry in options looks like this: options() - $editor [1] emacsclient

[R] debugging functions within Emacs/ESS/R

2004-09-24 Thread Thomas Schnhoff
Hi, I currently following some introductory material Data mining with R, which was highly reccommended to me (its really great!). During my studies I tried to run a given function to identify and substitute unknown values. Seemingly, running this function (page 57) did not work and gives me an

[R] members of clusters

2004-09-24 Thread Fernando Prass
Hi, How I can see the members of clusters generate by AGNES or DIANA (package clusters)? Thanks, Fernando Prass __ [EMAIL PROTECTED] mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide!

Re: [R] maps for Russian Federation

2004-09-24 Thread Roger Bivand
On Fri, 24 Sep 2004, Albrecht Kauffmann wrote: Dear all, I am interested in plotting maps visualizing spatial statistics in an aggregated fashion, according to administrative boundaries. Partially, I want to visualize some spatial data for administrative units (autonomous republics,

Re: [R] debugging functions within Emacs/ESS/R

2004-09-24 Thread tobias . verbeke
__ [EMAIL PROTECTED] mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html

Re: [R] debugging functions within Emacs/ESS/R

2004-09-24 Thread Tobias Verbeke
I'm sorry. My message just pointed to the document by Roger Peng: http://www.biostat.jhsph.edu/~rpeng/docs/R-debug-tools.pdf HTH, T. __ [EMAIL PROTECTED] mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide!

Re: [R] moving average method for time series objects

2004-09-24 Thread Kjetil Brinchmann Halvorsen
Schwarz,Paul wrote: Dear R-Help readers, I suspect that this question must be a FAQ, but my investigation of the archives has not been very revealing. Is there an R function for calculating moving averages of time series objects? library(gregmisc) ?running test - ts(rnorm(100)) test2 -

Re: [R] anova and post hoc multicomparison tests

2004-09-24 Thread Rogers, James A [PGRD Groton]
Guillaume, Your comments are a compliment to R. Undoubtedly other software is preferable if you want to do Student-Newman-Keuls or Fisher's protected LSD (ANOVA F-test followed by unadjusted T-tests). Perhaps the reason is that neither Student-Newman-Keuls nor Fisher's protected LSD is a valid

[R] R from outside program

2004-09-24 Thread Poizot Emmanuel
Hi all, I'm writing a program in C++ in witch there should be some graphical outputs. To do so, I would like to use R with the command : R --no-save cmdfile.R , where I put the R graphic commands in the cmdfile.R file. I call R from my C++ code but as R seems to run in batch mode, there are no

Re: [R] R from outside program

2004-09-24 Thread Sean Davis
You'll probably need to send your cmdfile.R to see what is in it, as that is where the problem likely is. However, if you do something line: pdf('my.pdf') plot(1:10,1:10) dev.off() in your cmdfile.R, you will get a pdf file of the plot saved in the directory where you ran your script. Note

Re: [R] R from outside program

2004-09-24 Thread Uwe Ligges
Poizot Emmanuel wrote: Hi all, I'm writing a program in C++ in witch there should be some graphical outputs. To do so, I would like to use R with the command : R --no-save cmdfile.R , where I put the R graphic commands in the cmdfile.R file. I call R from my C++ code but as R seems to run in

[R] geographically weighted glm

2004-09-24 Thread Mark Conrad
Hi all, I am interested in obtaining R code related to geographically weighted regression. In particular, I am interested in building geographically weighted Poisson GLMs. The model will contain categorical and continuous x independent variables, with interaction effects between categorical

Re: [R] RMySQL and Blob

2004-09-24 Thread David James
[EMAIL PROTECTED] wrote: Hi, I tried your suggestion to blindly import the blob into R, doing the following: con - dbConnect(MySQL, host=host, user=user, dbname=db) rs - dbGetQuery(con, statement=paste(select picture from db where id=1) It didn't crash R. But rs is not usable. It

[R] emacs, Mac OS X, R

2004-09-24 Thread Meinhard Ploner
Hi! Since August I am using emacs on my Macintosh to edit the R objects. I have installed R 1.9.1, Mac OS X 10.3.5 and GNU Emacs 21.2.1. However there are some issues I haven't resolved: a) switch the caps lock key to the meta key (and when this is not possible, switch the alt/option key to

Re: [R] geographically weighted glm

2004-09-24 Thread Roger Bivand
On Fri, 24 Sep 2004, Mark Conrad wrote: Hi all, I am interested in obtaining R code related to geographically weighted regression. In particular, I am interested in building geographically weighted Poisson GLMs. The model will contain categorical and continuous x independent

[R] Function sort.data.frame

2004-09-24 Thread Kevin Wright
I can never remember how to use order to sort the rows of a data frame, so like any good, lazy programmer, I decided to write my own function. The idea is to specify a data.frame and a one-sided formula with +/- indicating ascending/descending. For example: sort.data.frame(~ +nitro -Variety,

Re: [R] geographically weighted glm

2004-09-24 Thread Kjetil Brinchmann Halvorsen
Mark Conrad wrote: Hi all, I am interested in obtaining R code related to geographically weighted regression. In particular, I am interested in building geographically weighted Poisson GLMs. The model will contain categorical and continuous x independent variables, with interaction effects

RE: [R] moving average method for time series objects

2004-09-24 Thread Brahm, David
Paul Schwarz [EMAIL PROTECTED] wrote: Is there an R function for calculating moving averages of time series objects? Others have replied, but here's the simple answer for a trailing 5-day moving average, no non-standard packages needed: R x - 1:20 R filter(x, rep(1/5,5), sides=1) -- David Brahm

[R] Throwing expressions around

2004-09-24 Thread Barry Rowlingson
I'm trying to write some code that throws a few expressions around the place, and I've boiled down the problem to be equivalent to this. Consider the curve function which plots expressions in 'x': curve(x^2) Now wrap that in the most naive wrapper function: fc=function(m){curve(m)} and try

Re: [R] geographically weighted glm

2004-09-24 Thread Simon Wood
I am interested in obtaining R code related to geographically weighted regression. - package mgcv's gam function allows you to fit `variable parameter models' which include geographically weighted regression as a special case. For example if you think `income' depends on `age', but expect

Re: [R] Throwing expressions around

2004-09-24 Thread Roger D. Peng
I think you want some eval/substitute action, such as fc - function(m) { eval(substitute(curve(m))) } -roger Barry Rowlingson wrote: I'm trying to write some code that throws a few expressions around the place, and I've boiled down the problem to be equivalent to this. Consider the curve function

[R] Error with repeat lines() in function

2004-09-24 Thread Sean Davis
I have a function that does some plotting. I then add lines to the plot. If executed one line at a time, there is not a problem. If I execute the function, though, I get: Error in ans[[1]] : subscript out of bounds This always occurs after the second lines command, and doesn't happen

Re: [R] Throwing expressions around

2004-09-24 Thread Uwe Ligges
Barry Rowlingson wrote: I'm trying to write some code that throws a few expressions around the place, and I've boiled down the problem to be equivalent to this. Consider the curve function which plots expressions in 'x': curve(x^2) Now wrap that in the most naive wrapper function:

Re: [R] Error with repeat lines() in function

2004-09-24 Thread Uwe Ligges
Sean Davis wrote: I have a function that does some plotting. I then add lines to the plot. If executed one line at a time, there is not a problem. If I execute the function, though, I get: Error in ans[[1]] : subscript out of bounds This always occurs after the second lines command, and

[R] Contout plot options

2004-09-24 Thread Naji
Hi all As a new user of R, I need some help for a contour plot.. - How can I change x,y labels format ie .01 - 1% - Is is possible to change Axis Grph fonts to Times 11? - How can I change the xaxp? I gave it several trials without success.. Par(xaxp(0,1,4)

Re: [R] Error with repeat lines() in function

2004-09-24 Thread Sean Davis
Working on a toy example. I have run the debugger/browser on the example to find what line generates the error. However, I can't step into lines()--hence the question. Thanks for the help. Sean On Sep 24, 2004, at 12:18 PM, [EMAIL PROTECTED] wrote: Can you provide an example. Have you run

Re: [R] emacs, Mac OS X, R

2004-09-24 Thread Ulises Mora Alvarez
Hi! Don't know about how to switch the keys (I suspect that if you take a look at the Emacs manual you'll find that's not difficult at all). But if you like to have different colors for R within Emacs you should use ESS (Emacs Speaks Statistics), which is available at

Re: [R] Error with repeat lines() in function

2004-09-24 Thread Sean Davis
Here is an example that seems to reproduce the error: rf1 - matrix(sort(abs(round(runif(4)*100))),nrow=1) annot1 - sort(abs(round(runif(193)*100))) annot2 - annot1 + 70 annot3 - cbind(annot1,annot2) rat2 - rnorm(193) rat1 - rnorm(193) plotter - function(annot,rat1,rat2,rf1,...) {

[R] Raster images from sweave

2004-09-24 Thread hadley wickham
Is it possible to get sweave to produce raster (eg. png/jpg) plot images? I'm writing a vignette that contains plots with tens of thousands of points which results in very large pdf files (13 megs before compression). Thanks, Hadley __ [EMAIL

Re: [R] Raster images from sweave

2004-09-24 Thread Roger Bivand
On Fri, 24 Sep 2004, hadley wickham wrote: Is it possible to get sweave to produce raster (eg. png/jpg) plot images? I'm writing a vignette that contains plots with tens of thousands of points which results in very large pdf files (13 megs before compression). Yes. I do it by including

[R] Fitting Zernike polynomials

2004-09-24 Thread richard . kittler
I was looking for some routines to fit Zernike polynomials but nothing came up in the archive search. Can anyone provide a lead? --Rich Richard Kittler AMD TDG 408-749-4099 __ [EMAIL PROTECTED] mailing list

Re: [R] bwplot panels like stripplot

2004-09-24 Thread Deepayan Sarkar
On Friday 24 September 2004 11:42, Waichler, Scott R wrote: I would like to plot horizontal box-and-whisker plots in lattice where each factor has its own panel and scales are free. Below is a stripplot version of what I have in mind. Substituting bwplot doesn't work. I know it's gotta

Re: [R] Error with repeat lines() in function

2004-09-24 Thread Uwe Ligges
Sean Davis wrote: Here is an example that seems to reproduce the error: Well, debugging in apply() isn't funny and I'm tooo lazy at quarter past eight on a friday evening. Anyway, you can (a) do it using a loop (which isn't that inefficient compared to the apply() approach), or (b) the clever

Re: [R] Contout plot options

2004-09-24 Thread Uwe Ligges
Naji wrote: Hi all As a new user of R, I need some help for a contour plot.. - How can I change x,y labels format ie .01 - 1% - Is is possible to change Axis Grph fonts to Times 11? - How can I change the xaxp? I gave it several trials without success.. Par(xaxp(0,1,4)

Re: [R] Error with repeat lines() in function

2004-09-24 Thread james . holtman
The problem was is that you were not return a value from the apply function. It was trying to store the result of the apply into an array and there was no value. See the line I added in your function. __ James HoltmanWhat is

RE: [R] bwplot panels like stripplot

2004-09-24 Thread Waichler, Scott R
I would like to plot horizontal box-and-whisker plots in lattice where each factor has its own panel and scales are free. Below is a stripplot version of what I have in mind. Substituting bwplot doesn't work. This won't work (easily) with R = 1.9.1. Try with 2.0.0 beta, and let us know

[R] using tcltk in R under ESS/XEmacs on Windows

2004-09-24 Thread Liaw, Andy
Sorry for the cross-post. Not sure where the problem is... A while back I posted an R function to R-help: cd - function (dir = tclvalue(tkchooseDirectory()), saveOld = FALSE, loadNew = TRUE) { stopifnot(require(tcltk)) if (saveOld) save.image(compress = TRUE)

[R] RE: using tcltk in R under ESS/XEmacs on Windows

2004-09-24 Thread John Fox
Dear Andy, Perhaps it's possible, but I've never been able to get tcltk to work properly under ESS/Xemacs on Windows. Regards, John -Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Liaw, Andy Sent: Friday, September 24, 2004 3:03 PM To: [EMAIL

Re: [R] bwplot panels like stripplot

2004-09-24 Thread Deepayan Sarkar
On Friday 24 September 2004 14:45, Waichler, Scott R wrote: I would like to plot horizontal box-and-whisker plots in lattice where each factor has its own panel and scales are free. Below is a stripplot version of what I have in mind. Substituting bwplot doesn't work. This won't

Re: [R] using tcltk in R under ESS/XEmacs on Windows

2004-09-24 Thread Marc Schwartz
On Fri, 2004-09-24 at 15:02, Liaw, Andy wrote: Sorry for the cross-post. Not sure where the problem is... A while back I posted an R function to R-help: cd - function (dir = tclvalue(tkchooseDirectory()), saveOld = FALSE, loadNew = TRUE) { stopifnot(require(tcltk)) if

[R] RE: using tcltk in R under ESS/XEmacs on Windows

2004-09-24 Thread John Fox
Dear Andy, I've taken the liberty of copying this reply to the r-help and ess-help lists since my last reply was misleading. I believe that the problem with tkchooseDirectory() (you can see it by just calling that function directly) is that it brings up a native Windows dialog, and it's that

RE: [R] using tcltk in R under ESS/XEmacs on Windows

2004-09-24 Thread Liaw, Andy
From: Marc Schwartz On Fri, 2004-09-24 at 15:02, Liaw, Andy wrote: Sorry for the cross-post. Not sure where the problem is... A while back I posted an R function to R-help: cd - function (dir = tclvalue(tkchooseDirectory()), saveOld = FALSE, loadNew = TRUE) {

Re: [R] moving average method for time series objects

2004-09-24 Thread Martin Maechler
Kjetil == Kjetil Brinchmann Halvorsen [EMAIL PROTECTED] on Fri, 24 Sep 2004 08:34:19 -0400 writes: Kjetil Schwarz,Paul wrote: Dear R-Help readers, I suspect that this question must be a FAQ, but my investigation of the archives has not been very revealing. Is

[R] exponential correlation?

2004-09-24 Thread TRAMIER Blaise
Hello, I have been asked to perform a exponential correlation on a data set. Unfortunately, i did not find any simple example on how to do that with R. If the correlation is significant, one asked me to also find the thresold of the acceleration slope. Have any of you a little example