[R] mozilla/firefox search engine AMD64 jre1.5 plugin linux

2005-08-22 Thread laurent buffat
Hi, I have a problem with the help.start() and the search engine on a AMD64 : The search engine use the java plugin but the java plugin is not available for the jre.1.5 ... I have a linux box : fedora 4 on 64bit and R2.1.1 When I start the search engine, I had the message that the java plugin

Re: [R] mozilla/firefox search engine AMD64 jre1.5 plugin linux

2005-08-22 Thread Prof Brian Ripley
This is a 64-bit FC* issue. I believe we did a year or so ago run i686 firefox (from mozilla.org) and the Sun Java + plugin on AMD64 FC2. Note that help.search() will do all that the HTML search engine does, and more. On Windows, you would get help for a different version of R, but i686

[R] integration

2005-08-22 Thread Fred J.
Hello after reading few nodes from the info docs. I am not sure if this task can be done using R: the density function f(x,y) = 12xy(1-y) for 0x1, 0y1 the condition of inequality (x-y) (1/2) what if the limits of integration are functions of the variable I am integrating over. is this somthing

Re: [R] integration

2005-08-22 Thread Prof Brian Ripley
Numerical integration: yes. Symbolic integration: no. On Mon, 22 Aug 2005, Fred J. wrote: after reading few nodes from the info docs. I am not sure if this task can be done using R: the density function f(x,y) = 12xy(1-y) for 0x1, 0y1 the condition of inequality (x-y) (1/2) what if the

[R] reShape question

2005-08-22 Thread Jean-Louis Abitbol
Dear R helpers, The following output, from Hmisc reShape examples, illustrates how to reshape from a data frame with repeated measures. I would need to do exactly the opposite ie get sbp1 to 3 and dbp1 to 3 from sbp and and dbp. Is there a way to do that without subsetting, renaming and

Re: [R] time series plots: labels language tickmarks

2005-08-22 Thread Prof Brian Ripley
On Mon, 22 Aug 2005, javier garcia - CEBAS wrote: My native language is spanish and I would need to do two changes in the default xlabels in timeseries plots: What sort of plots are you talking about here? (Not tsplot or plot.ts, for example.) I think you are perhaps talking about plots of

Re: [R] time series plots: labels language tickmarks

2005-08-22 Thread Gavin Simpson
On Mon, 2005-08-22 at 13:04 +0100, Prof Brian Ripley wrote: On Mon, 22 Aug 2005, javier garcia - CEBAS wrote: My native language is spanish and I would need to do two changes in the default xlabels in timeseries plots: What sort of plots are you talking about here? (Not tsplot or

[R] vectors of different length in a matrix

2005-08-22 Thread Marten Winter
HI! I?ve 3 vectors of different length (a,b,c) and want to arrange them in a matrix a,b,c as rows and the figures of these vectors in the columns (with that matrix i want to calculate a distance between thes vectors - vegan - vegdist - horn). Is there a possibilty to create such a matrix and

Re: [R] vectors of different length in a matrix

2005-08-22 Thread Jari Oksanen
On Mon, 2005-08-22 at 08:56 -0400, Duncan Murdoch wrote: On 8/22/2005 8:45 AM, Marten Winter wrote: HI! I?ve 3 vectors of different length (a,b,c) and want to arrange them in a matrix a,b,c as rows and the figures of these vectors in the columns (with that matrix i want to calculate

Re: [R] vectors of different length in a matrix

2005-08-22 Thread Jari Oksanen
On Mon, 2005-08-22 at 16:13 +0300, Jari Oksanen wrote: On Mon, 2005-08-22 at 08:56 -0400, Duncan Murdoch wrote: On 8/22/2005 8:45 AM, Marten Winter wrote: HI! I?ve 3 vectors of different length (a,b,c) and want to arrange them in a matrix a,b,c as rows and the figures of these

[R] How to add values on the axes of the 3D bi-variable lrm fit?

2005-08-22 Thread Jan Verbesselt
Dear r-list, When I try to plot the following 3D lrm fit I obtain only arrows with labels on the three axes of the figure (without values). fit - lrm(y ~ rcs(x1,knots)+rcs(x2,knots), tol=1e-14,X=T,Y=T) dd - datadist(x1,x2);options(datadist='dd'); par(mfrow=c(1,1)) plot(fit,x1=NA,

[R] How to add legend of plot.Design function ( method=image)?

2005-08-22 Thread Jan Verbesselt
Dear Rlist, How can the Legend of the plot.Design() function can be visualized? Following the documentation in R, I did the following (see below), only the 'Legend' function doesn't visualize the legend of the plot (method='image') of the lrmfit. I tried to change par( margin setting)

Re: [R] pdf font embedding --- again

2005-08-22 Thread Prof Brian Ripley
On Mon, 22 Aug 2005 [EMAIL PROTECTED] wrote: dear R wizards--- I would like to do some book-on-demand printing at a popular printer named lulu, but lulu requires inclusion even of the basic postscript fonts. Interestingly, my book itself does not need the 14 base acrobat fonts, only the

[R] rgui on windows quiting automatically

2005-08-22 Thread Greg Snow
Rgui on my computer has started acting funny (though I expect the problem is with my system rather than R, but hopefully someone here can still help). I am working with R version 2.11 on windows 2000. Rgui was working fine, then last week it started acting up. Now when I start Rgui (from

[R] pdf font embedding --- again

2005-08-22 Thread ivo_welch-rstat8303
dear R wizards--- I would like to do some book-on-demand printing at a popular printer named lulu, but lulu requires inclusion even of the basic postscript fonts. Interestingly, my book itself does not need the 14 base acrobat fonts, only the embedded R figures do. Of course, I really

[R] plotting with same axes

2005-08-22 Thread sms13+
I have used the 'par' command to overlay one plot on another. But how do I overlay it with the x-values plotted at the same points on the x-axis? Thank you, Steven __ R-help@stat.math.ethz.ch mailing list

[R] lm.ridge again

2005-08-22 Thread daniel
Hello, I have posted this mail a few days ago without any answer: I have the following doubts related with lm.ridge, from MASS package. To show the problem using the Longley example, I have the following doubts: First: I think coefficients from lm(Employed~.,data=longley) should be equal

[R] read a table ignoring specific rows ?

2005-08-22 Thread vincent
Dear R users, First of all sorry for this question, surely quite naive. (I searched on the R site but was unable to find by myself). I have a table, called infile : 1 2 3 4 5 6 7 8 9 I would like to read it and ignore the rows with 1st element 3 I do it now with a for loop, and it's ok, but I

Re: [R] plotting with same axes

2005-08-22 Thread Marc Schwartz (via MN)
On Mon, 2005-08-22 at 12:58 -0400, [EMAIL PROTECTED] wrote: I have used the 'par' command to overlay one plot on another. But how do I overlay it with the x-values plotted at the same points on the x-axis? Thank you, Steven The specific answer depends to an extent on the graphics

Re: [R] read a table ignoring specific rows ?

2005-08-22 Thread Sean O'Riordain
Can you read in the entire file as a data.frame; and then construct a new data.frame which excludes some rows? perhaps something along the lines of... fred.file - data.frame() fred.file - edit(fred.file) fred.file colA colB colC 1142 2233 3354 443

Re: [R] read a table ignoring specific rows ?

2005-08-22 Thread vincent
Thank you very much to all of you. Sorry once more for this too simple question. I have to improve my knowledge about the syntax ! Thanks Vincent __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the

Re: [R] R-help

2005-08-22 Thread Mike Waters
Diego, Have you checked out the home site for nls2? Specifically the system requirements page? http://www.inra.fr/miaj/public/AB/nls2/available.html That says that nls2 requires a Unix-like operating system. Basically, the script for building the library is for such systems only, it also

Re: [R] function for two-part or two-condition models

2005-08-22 Thread Richard Chandler
Hello list, Andrew, and Richard, I wanted to send you a late thanks your for your suggestions and mention that I recently stumbled upon what I was looking for in the VGAM package. If you're interested, see the help file for zapoisson, which is based on both a binomial and a poisson

Re: [R] pdf font embedding --- again

2005-08-22 Thread ivo_welch-rstat8303
Thank you---as always. still, I remain font-desparate. I would love to use the fonts from my book, but [a] I cannot figure out how to do this yet even in the R postscript device; and [b] I am using the R pdf device, not the postscript device. I guess if I can solve [a], then I can rewrite

Re: [R] How to add legend of plot.Design function (method=image)? (if (!.R.) )

2005-08-22 Thread Jan Verbesselt
Hi, When running z - plot(fit, age=NA, cholesterol=NA, perim=boundaries, method='image') Legend(z, fun=plogis, at=qlogis(c(.01,.05,.1,.2,.3,.4,.5)), zlab='Probability') And after pointing the cursor to the plot() screen in R, I obtain the following message: Using function

Re: [R] translating output ( latex()....)

2005-08-22 Thread Frank E Harrell Jr
Anne wrote: Dear R-helpers I need to produce statistical output where the annotations are in French (and from time to time in German). I produce plots/tables using extensively the latex() , summary.formula() ...functions of Hmisc which allows me for nice print-out. Up to now I corrected

Re: [R] How to add legend of plot.Design function (method=image)? (if (!.R.) )

2005-08-22 Thread Frank E Harrell Jr
Jan Verbesselt wrote: Hi, When running z - plot(fit, age=NA, cholesterol=NA, perim=boundaries, method='image') Legend(z, fun=plogis, at=qlogis(c(.01,.05,.1,.2,.3,.4,.5)), zlab='Probability') And after pointing the cursor to the plot() screen in R, I obtain the

[R] problem building dendrograms to use with heatmap()

2005-08-22 Thread Wittner, Ben
Hi, I'm trying to build dendrograms to pass to heatmap(). The dendrograms I build plot properly, but when I pass them to heatmap() I get the error message row dendrogram ordering gave index of wrong length (see output log below). I looked in the code of heatmap() and saw that the error was due to

[R] cbind and rbind

2005-08-22 Thread Tony Evans
Hi, I have been trying for a while to use cbind and rbind to add a row and column to the same table but seem to be able only to add one OR the other??? Any help would be most welcome, Tony Evans Australia [[alternative HTML version deleted]]

Re: [R] cbind and rbind

2005-08-22 Thread Andy Bunn
Like this? x - cbind(rnorm(10), rnorm(10)) # add row total x - cbind(x, rowSums(x)) # add col sums x - rbind(x, colSums(x)) The KEY to posting to r-help is writing a small example that helpers can reproduce. When I write one, I often find the answer myself. I often don't and get eviscerated

Re: [R] How to add legend of plot.Design function ( method=image)? (if (!.R.) )

2005-08-22 Thread Greg Snow
Greg Snow, Ph.D. Statistical Data Center, LDS Hospital Intermountain Health Care [EMAIL PROTECTED] (801) 408-8111 Frank E Harrell Jr [EMAIL PROTECTED] 08/22/05 03:15PM Jan Verbesselt wrote: [snip discussion of subplot not being in R] While R does not have the subplot function there is an

Re: [R] how to reshape an array avoiding for loops

2005-08-22 Thread Spencer Graves
Have you considered aperm? I found this listed under See Also for ?t. spencer graves Wladimir Eremeev wrote: Dear r-help, I have an array a1 with dimensions [1:660,1:65,1:25] I would like the first dimension to be the last one. That is I want and array

Re: [R] specify seed for Random Number Generator

2005-08-22 Thread Spencer Graves
Have you considered set.seed? This was listed with the first hit for 'RSiteSearch(random number seed)'. spencer graves Dhiren DSouza wrote: I need to generate 100 I.I.D samples from an exponential distribution. I use rexp(100,parameter). Is there anyway to specify a