Why do you repost this request to R-help?
I already pointed you to the package maintainer!
Uwe Ligges
amna khan wrote:
-- Forwarded message --
From: amna khan [EMAIL PROTECTED]
Date: Dec 6, 2006 10:28 PM
Subject: R-Help
To: [EMAIL PROTECTED]
Respected Sir
I am a very new
try this:
dat - data.frame(Id, Noise, Height)
##
dat - dat[order(dat$Id), ]
ind - unlist(tapply(dat$Noise, dat$Id, function(x) x == max(x)))
dat[ind, ]
dat[!ind, ]
I hope it helps.
Best,
Dimitris
Dimitris Rizopoulos
Ph.D. Student
Biostatistical Centre
School of Public Health
On Thu, 7 Dec 2006, Achim Zeileis wrote:
On Thu, 7 Dec 2006, Samarasinghe, Oshadhi Erandika wrote:
Hello,
Could anyone please tell me how to estimate Heteroscedasticity
Consistent standard errors for a Spatial error model? All the functions
I have looked at only works for lm objects.
Dear Alexender !
In the instruction
stichproben[i] - samp_i ,
samp_i is a vector while stichproben[i] is vector element
It can be better to consider stichproben as a list at beginning e.g
stichproben-list(0,0)
stichproben[[i]]-samp_i will work
This instruction is
ix -
zhijie zhang wrote:
Dear Ruser,
Today, i download R2.4.0-win32.exe, but can't set it up successfully. The
error informaiton is :
*0x38e4memory quoted by ox6c7f22b3 can't be readonly.*
My operating system in WindowXP. Where goes wrong?
Thanks.
If your computer is speaking Chinese,
At 22:16 04/12/2006, Michael McCulloch wrote:
Hello,
I'm just beginning to learn R. What books/online learning modules
with datasets would you suggest?
Thank you!
If
a) you already know some statistics
b) you want to use R as a tool in your applied statistical work
then
@BOOK{venables02,
Hi Dimitris,
This works fine.
Thanks!, Ed
--
--
Ed Gordijn
Adviseur geluidscapaciteit
Amsterdam Airport Schiphol
Business Area Aviation (A/CAP/EC)
Postbus 7501, 1118 ZG Schiphol
Bezoekadres: Evert v/d Beekstraat 202, 1118 CP Schiphol
tel 020 601 32 22
When I tried Professor Ripley's example (below), the tz argument
failed to adjust clock time from UTC.
(z - ISOdatetime(1970,1,1,0,0,0, tz=UTC)+1165398135729/1000)
[1] 2006-12-06 09:42:15 UTC
format(z, %Y-%m-%d %H:%M:%OS3,tz = CET)
[1] 2006-12-06 09:42:15.729
# expected CET (Central
CET is not a valid timezone *on Windows*: please do RTFM.
E.g. ?Sys.timezone says
'Sys.timezone' returns an OS-specific character string, possibly
an empty string. It may be possible to set the timezone via the
environment variable 'TZ': see 'as.POSIXlt'. Windows is
Etienne wrote:
I'm using barplot with the following call:
barplot(stat_data[[5]][,],axes=TRUE,axisnames=TRUE,axis.lty=1,xlab=xlab,ylab=ylab,beside=TRUE,las=1,font.lab=2,font.axis=1,legend.text=TRUE)
The example is not reproducible and poorly formatted. Please read the
posting guide.
Hello,
I've just located the illuminating explanation by Douglas Bates on degrees
of freedom in mixed models.
The take-home message appears to be: don't trust the p-values from lme.
Questions:
Should I give up hypothesis testing for fixed effects terms in mixed models?
Has my time spent reading
Aimin Yan wrote:
I am new to R. Maybe this is very simple question.
I have a dataframe, there is column that is factor.
This factor has three level that 1,2,3.
Now I want to change these level(1,2,3) to level(red,blue,dark).
Does anybody how to do this job?
levels(dataframe$column) -
Aimin Yan aiminy at iastate.edu writes:
I am new to R. Maybe this is very simple question.
I have a dataframe, there is column that is factor.
This factor has three level that 1,2,3.
Now I want to change these level(1,2,3) to level(red,blue,dark).
Does anybody how to do this job?
levels()
Given the following data (see below) on nest locations (fid.albers = 149,
148, etc.), I need to (a) calculate the distance between all fid pairs, and
(b) flag all nests within an user-specified radius. What syntax will
accomplish both tasks? If it helps, I have the nest locations as eastings
Dear R Users,
If it is possible, i would like to learn whether a R package that can be
used for Taguchi design is available.
Sincerely
--
Ýbrahim Mutlay
[[alternative HTML version deleted]]
__
R-help@stat.math.ethz.ch mailing list
Thanks, David. I tried converting my rectangular matrix to a network
object and then back to a square matrix. This works for a small
artificial dataset (e.g. 2x5), but when I try this on my 1790x45 or
transposed 45x1790 matrix, R keeps working for a couple of minutes and
then crashes
2006/12/7, Chuck Cleland [EMAIL PROTECTED]:
Ýbrahim Mutlay wrote:
Dear R Users,
If it is possible, i would like to learn whether a R package that can be
used for Taguchi design is available.
Ibrahim:
Have you considered functions in the AlgDesign package?
Hi,
I used the MCMCirtKd function of MCMCpack:
posterior2 - MCMCirtKd(data, dimensions = 2,
+burnin = 5000, mcmc = 5, thin = 10,
+ verbose = 1, B0 = .25, store.item = TRUE, item.constraints =
beta.constraints)
And after apply the comand summary() I got some
Hi,
does anybody know of a templating library for R,
like velocity or freemarker?
It doesn't have to be very fancy just a bit
better than sub in replacing tags in a text (not
necessarily html) file.
thank you very much for your answer.
Ido
__
Dear all R users,
Suppose I have two datasets:
g =
8/11/200592.75
9/11/200592.30
10/11/200592.55
11/11/200593.90
11/14/200594.20
11/15/200594.40
11/16/2005
Hello,
The 'trip' package provides extensions to the 'sp' spatial classes for
animal track data.
Trip objects are created from SpatialPointsDataFrame objects by
specifying the columns containing ID and date-time data. Argos formats
can be read directly, and there are functions for basic
if you read them in as zoo objects , you can then use merge.zoo but but
I need to
Send you an example of reading them in as zoo objects.
Hold on.
I also have your binders on my shelf ready to send. I've just been
forgetting/busy.
-Original Message-
From: [EMAIL PROTECTED]
Bert--
Well, in an attempt to be pithy, I think I lost my message.
The comment was directed not at you specifically, but at the
idea that, given four print positions, one would ever want to
print zeroes instead of data without an explicit warning.
I quite agree with your comments on precision.
Although you don't have coordinates, there has to be some kind of information
on spatial relationships. (I am likely saying the same thing as Roger.)
Let me see if I have this right. Some large area is partitioned into cells
(polygons in an ArcInfo shape file?) and, within each
Thanks, David. I tried converting my rectangular matrix to a network
object and then back to a square matrix. This works for a small
artificial dataset (e.g. 2x5), but when I try this on my 1790x45 or
transposed 45x1790 matrix, R keeps working for a couple of minutes and
then crashes
Dear All,
Thank you very much for all the insights!
We truly appreciate your thought and your time.
--Anna
-
Anna Belova
Abt Associates Inc.
4800 Montgomery Ln, St 600
Bethesda, MD-20814
phone: 301-347-5304
http://www.abtassociates.com/environment
I'm using groupedData from nlme. I set up a groupedData data.frame with
outer=~group1. When I try to plot with outer=TRUE, I get subscript out
of bounds. This happens most of the time. When it works, I get
spaghetti-type plots for comparing groups. But I don't understand why it
doesn't usually
No, you do not necessarily need the XY coordinates. You can also use polygon
(field, in your case) adjacency information. See Rogerson, Peter A. 2001.
_Statistical methods for geography_. Thousand Oaks: Sage.
You might also look at GeoDA, a free and soon-to-be open source spatial
analysis
Phil == Philip Leifeld [EMAIL PROTECTED]
on Tue, 05 Dec 2006 22:30:02 +0100 writes:
Phil Dear all,
Phil how can I convert an m x n incidence matrix into an m x m adjacency
Phil matrix or an n x n adjacency matrix? The current matrix contains
binary
Phil data, hence the
I use svm , then I want to do like this
But give me this error. Does anyone know how to solve these?
Aimin
plot(m.svm,p5.new,As~Cur)
Error in scale(newdata[, object$scaled, drop = FALSE], center =
object$x.scale$scaled:center, :
(subscript) logical subscript too long
Dear Rexperts,
after building R 2.4.0 from source in a temporary directory (*without*
installation), and subsequently moving the whole source/build tree to
another location, I have noticed that I had to change the variables
R_SHARE_DIR, R_INCLUDE_DIR, and R_DOC_DIR in the wrapper-script
On Thu, 2006-12-07 at 19:34 +0200, Ivailo Stoyanov wrote:
Dear Rexperts,
after building R 2.4.0 from source in a temporary directory (*without*
installation), and subsequently moving the whole source/build tree to
another location, I have noticed that I had to change the variables
When you moved the source/build tree to another location, did you
use 'make install' as root, or did you use 'mv' or 'cp'?
No, I haven't used make install because I prefer to run R from within
the build location.
The former is the _proper_ way to actually install R, after building
from
Ivailo Stoyanov wrote:
When you moved the source/build tree to another location, did you
use 'make install' as root, or did you use 'mv' or 'cp'?
No, I haven't used make install because I prefer to run R from within
the build location.
The former is the _proper_ way to actually
On Thu, 2006-12-07 at 20:15 +0200, Ivailo Stoyanov wrote:
When you moved the source/build tree to another location, did you
use 'make install' as root, or did you use 'mv' or 'cp'?
No, I haven't used make install because I prefer to run R from within
the build location.
The former is
Peter Dalgaard wrote:
[snip]
AFAIK, the approach of running R from within the build location is
fully valid as it is noted at the end of section 2.1 Simple
compilation, just above the cited one:
Yes, but then it is not actually installed.
[snip]
... Note: you do not need to install R:
I'd like to evaluate a function at each point on a 2 or 3-D grid. Is
there some function that already does this, or generates the grid of
points?
My search has led me to the grid and lattice packages, and I found a
reference to the sp package (e.g., SpatialGrid) for this. There are
things in
Ross
I think you want
?expand.grid
BTW, help.search('grid') finds this.
Cheers ..
Peter Alspach
-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Ross Boylan
Sent: Friday, 8 December 2006 8:03 a.m.
To: r-help
Subject: [R] making a grid of
On Fri, 2006-12-08 at 08:09 +1300, Peter Alspach wrote:
Ross
I think you want
?expand.grid
BTW, help.search('grid') finds this.
Cheers ..
Peter Alspach
I can't believe I missed that--my eye just jumped to all the stuff in
the grid package. Thank you.
-Original
On Thu, 7 Dec 2006, Ross Boylan wrote:
I'd like to evaluate a function at each point on a 2 or 3-D grid. Is
there some function that already does this, or generates the grid of
points?
My search has led me to the grid and lattice packages, and I found a
reference to the sp package (e.g.,
Marc Schwartz wrote:
I have not validated this that will do it, but short of re-building R in
the new location, this should work I think. Many of the environmental
vars are hard coded during the build process and then modified during a
make install based upon build time configuration options.
On 12/7/06, Rick Bilonick [EMAIL PROTECTED] wrote:
I'm using groupedData from nlme. I set up a groupedData data.frame with
outer=~group1. When I try to plot with outer=TRUE, I get subscript out
of bounds. This happens most of the time. When it works, I get
spaghetti-type plots for comparing
Thanks to the valuable hints posted, I managed to track down the source
of the problem -- a copy of the *uncorrected* /usr/lib/R/bin/R script
was left over in /usr/bin.
Thank you again for the patience!
Greets,
Ivailo
__
R-help@stat.math.ethz.ch
Thank you very much for your help, much appreciated.
Regards,
Oshadhi Samarasinghe
RA
Department of Economics
University of Auckland
New Zealand
-Original Message-
From: Roger Bivand [mailto:[EMAIL PROTECTED]
Sent: Thursday, 7 December 2006 10:18 p.m.
To: Achim Zeileis
Cc:
A few days ago there was a thread on calling R from Delphi to which
there were several useful responses. Now I responded as well, with
what I regard as a useful contribution. Shortly after that, I was not
able to able to see the thread in my newsreader (Thunderbird).
Suddenly, yesterday I
I use thunderbird as my newsreader and I see the thread just fine. So,
don't worry, nobody has deleted what you regard as a useful contribution.
Regards
Francisco
Dr. Francisco J. Zagmutt
College of Veterinary Medicine and Biomedical Sciences
Colorado State University
Tom Backer Johnsen
Tom Backer Johnsen wrote:
A few days ago there was a thread on calling R from Delphi to which
there were several useful responses. Now I responded as well, with
what I regard as a useful contribution. Shortly after that, I was not
able to able to see the thread in my newsreader
Hello!
So, the simulation works (drawing 100 samples and then calculate the
model for each sample). Here is the code:
--snip--
# sample size n=200
ergebnisse200 - rep(0, each=100)
stichproben200 - vector(“list”, 100)
default200 - rep(0, each=100)
for (i in seq(1:100)) {
n - dim(daten)[1]
I am not familiar with velocity or freemarker but
the gsubfn package can do string interpolation
somewhat similar to perl. The gsubfn and strapply
functions in that package can handle arbitrary regular
expressions in a similar way. See:
http://code.google.com/p/gsubfn/
On 12/7/06, Ido M.
I run the following code, all other is ok,
but plot(m.svm,p5.new,As~Cur) is not ok
Anyone know why?
install.packages(e1071)
library(e1071)
library(MASS)
p5 - read.csv(http://www.public.iastate.edu/~aiminy/data/p_5_2.csv;)
p5.new-subset(p5,select=-Ms)
p5.new$Y-factor(p5.new$Y)
levels(p5.new$Y) -
Peter Dalgaard wrote:
Tom Backer Johnsen wrote:
A few days ago there was a thread on calling R from Delphi to which
there were several useful responses. Now I responded as well, with
what I regard as a useful contribution. Shortly after that, I was not
able to able to see the thread in
Hello there,
In gdata package, read.xls is to be used for reading excel data (from
windows).
The following is my code:('C:/session/sampledata.xls' is where the file
is stored)
data1-read.xls('C:/session/sampledata.xls',sheet=1)
and I got the following error message:
Error in system(cmd, intern
Lisa Wang said the following on 12/7/2006 3:01 PM:
Hello there,
In gdata package, read.xls is to be used for reading excel data (from
windows).
The following is my code:('C:/session/sampledata.xls' is where the file
is stored)
data1-read.xls('C:/session/sampledata.xls',sheet=1)
and
Try using mcmcsamp() to sample from the posterior distribution of the
parameter estimates. You can calculate a p-value from that, if that is
your desire. Instructions are in the R wiki:
http://wiki.r-project.org/rwiki/doku.php?id=guides:lmer-tests
HTH,
Simon.
Dan Bebber wrote:
Hello,
You need perl installed for it to work.
Although you normally would not need to use them note the
verbose= and perl= arguments on the read.xls command.
If you don't want to install perl try using RODBC:
library(RODBC)
z - odbcConnectExcel(/a.xls)
dd - sqlFetch(z,Sheet1)
Or alternatively you can use xlsReadWrite package
install.packages(xlsReadWrite)
library(xlsReadWrite)
read.xls(sampledata.xls)
Regards,
Francisco
Dr. Francisco J. Zagmutt
College of Veterinary Medicine and Biomedical Sciences
Colorado State University
Gabor Grothendieck wrote:
You need
Rick,
I think that it will be easier for us to comment if you send us
reproducible code. Cna you reproduce the error, for example, using
one of the datasets that accompanise the nlme package? If so, please
send us that code. If not, then there could bea problem with your
data. Either way,
I run the following code, all other is ok,
but plot(m.svm,p5.new,As~Cur) is not ok
Anyone know why?
install.packages(e1071)
library(e1071)
library(MASS)
p5 - read.csv(http://www.public.iastate.edu/~aiminy/data/p_5_2.csv;)
p5.new-subset(p5,select=-Ms)
p5.new$Y-factor(p5.new$Y)
levels(p5.new$Y) -
I run the following code, all other is ok,
but plot(m.svm,p5.new,As~Cur) is not ok
Anyone know why?
install.packages(e1071)
library(e1071)
library(MASS)
p5 - read.csv(http://www.public.iastate.edu/~aiminy/data/p_5_2.csv;)
p5.new-subset(p5,select=-Ms)
p5.new$Y-factor(p5.new$Y)
levels(p5.new$Y) -
install.packages(e1071)
Warning: package 'e1071' is in use and will not be installed
library(e1071)
library(MASS)
p5 - read.csv(http://www.public.iastate.edu/~aiminy/data/p_5_2.csv;)
attach(p5)
The following object(s) are masked from p5 ( position 3 ) :
Aa As Cur Ms
where is plot.svm method?
I just find plot(svm, data, formula) method
Aimin
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R-help@stat.math.ethz.ch mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide
Hello, I am trying to input the following formula into R for parameter
estimation. I don't quite have the just of formula syntax. I understand
simple basic regression (y ~ x), but how do I do the ff:
y = ( b0*x )/(x + b1),
where b0 and b1 are parameters that need to be solved. Any
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