(if possible with variable selection)?
Thanks,
Christian
*** --- ***
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University College London, Department of Statistical Science
Gower St., London WC1E 6BT, phone +44 207 679 1698
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On Mon, 12 Mar 2007, Sender wrote:
Hello:
Does anyone know if there exists a package that handles methods for [ for
dist objects?
I would like to access a dist object using matrix notation
e.g.
dMat = dist(x)
dMat[i,j]
Try
dMat - as.matrix(dist(x))
Christian
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commented, minimal, self-contained, reproducible code.
*** --- ***
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for the confusion,
weiwei
On 10/18/06, Christian Hennig [EMAIL PROTECTED] wrote:
Dear Weiwei,
btw, ?cluster.stats does not work on my Mac machine.
version
_
platform i386-apple-darwin8.6.1
arch i386
os darwin8.6.1
system i386
).
There are also several methods for the visualization of separation (I
know that you didn't ask for that) for which the function plotcluster is
an interface.
Best,
Christian
*** --- ***
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University College London, Department of Statistical Science
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in the
cluster to a point of another cluster.
Best regards,
Christian
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Christian Hennig
University College London, Department of Statistical Science
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...
Best,
Christian
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solutions
which involve installing all packages again (I know that this is possible).
Best,
Christian
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University College London, Department of Statistical Science
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here?
Best,
Christian
*** --- ***
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University College London, Department of Statistical Science
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, but
answers are still appreciated because I rather created a rough
workaround than solved it).
What can I do to get better information about what caused the problem in
my Rd files?
Best,
Christian
*** --- ***
Christian Hennig
University College London, Department of Statistical Science
Gower St., London
file.
This helped me to find the problem (a mathematical formula not using
\eqn{})!
Lieber Gruss zurueck,
Christian
*** --- ***
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University College London, Department of Statistical Science
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[EMAIL PROTECTED
guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
*** --- ***
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University College London, Department of Statistical Science
Gower St., London WC1E 6BT, phone +44 207 679 1698
[EMAIL PROTECTED
want 2 clusters for example.
Am I also right in thinking that I can say which 'centriods' I want the
clustering to be done?
You can specify from which centroids the kmeans iteration should start, if
you want to.
Christian
*** --- ***
Christian Hennig
University College London, Department
and the
print method (print.summary.foo) should print an overview of the result.
But in some cases the print method will make use of more or less all the
output information of the function. Is there any reason to implement a
summary method in these cases?
Best,
Christian
*** --- ***
Christian
, +44 1865 272866 (PA)
Oxford OX1 3TG, UKFax: +44 1865 272595
*** --- ***
Christian Hennig
University College London, Department of Statistical Science
Gower St., London WC1E 6BT, phone +44 207 679 1698
[EMAIL PROTECTED], www.homepages.ucl.ac.uk/~ucakche
print(sum(estest11))
[1] 5575
binom.test(5575,1)
Exact binomial test
data: 5575 and 1
number of successes = 5575, number of trials = 1, p-value
2.2e-16
*** --- ***
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University College London, Department of Statistical Science
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[EMAIL PROTECTED], www.homepages.ucl.ac.uk/~ucakche
of a certain
size?
What clustering method did you apply and why?
How would you like to specify the size of your clusters (and why)?
Best,
Christian
*** --- ***
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University College London, Department of Statistical Science
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[EMAIL
guide! http://www.R-project.org/posting-guide.html
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per single
variable)
}
clus.mat
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[i]+run_cols[j]
}
}
Thank you,
Serguei
Christian
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, is right to apply:
lme(A~1,data=DATA,random=~1|B)?
Yes.
Christian
*** --- ***
Christian Hennig
University College London, Department of Statistical Science
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]]
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to implement but it's for
explanation to people who faint if they have to do their own
programming...
Christian
*** --- ***
Christian Hennig
University College London, Department of Statistical Science
Gower St., London WC1E 6BT, phone +44 207 679 1698
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confint(lm(weight ~ group))
2.5 %97.5 %
(Intercept) 4.569340 5.4946602
groupTrt-1.025300 0.2833003
Christian Hennig wrote:
Hi list,
is there any direct way to obtain confidence intervals for the regression
slope from lm, predict.lm or the like
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be surprised if cosine index is missing (and
if needed, I could write it for you in C, but I don't think that is
necessary).
Generation of the standard dist format out of a distance
matrix m works simply by as.dist(m).
Christian
*** --- ***
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University College London, Department
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Christian Hennig
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[EMAIL
to make about the non-outliers in the dataset (which should be
elliptically distributed and homogeneously close to a multivariate
normal distribution for the Mahalanobis approach).
Best,
Christian
*** NEW ADDRESS! ***
Christian Hennig
University College London, Department of Statistical Science
Christian Hennig
Sendt: 8. august 2005 14:45
Til: alessandro carletti
Cc: rHELP
Emne: Re: [R] selecting outliers
Hi Alessandro,
On Mon, 8 Aug 2005, alessandro carletti wrote:
Hi everybody,
I'd like to know if there's an easy way for extracting outliers record
from a dataset, in order
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... try something...). Look if the
problem vanishes after such rescaling.
Don't ask me the same about the second email - I don't have the time to
explain that in detail.
Sorry,
Christian
thanks,
weiwei
On 8/8/05, Christian Hennig [EMAIL PROTECTED] wrote:
Once I had a situation where
indeed doesn't exist, but why should
it?)
Thank you,
Christian
*** NEW ADDRESS! ***
Christian Hennig
University College London, Department of Statistical Science
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III
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guide! http://www.R-project.org/posting-guide.html
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Christian Hennig
University College London, Department of Statistical Science
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ADDRESS! ***
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! ***
Christian Hennig
University College London, Department of Statistical Science
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you want
to do) - an MDS method alone could be enough for you
(cmdscale, if you want to do something analogous to PCA).
Best,
Christian
*** NEW ADDRESS! ***
Christian Hennig
University College London, Department of Statistical Science
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[EMAIL
in the model?
Thanks,
Christian
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From 1 April 2005: Department of Statistical Science, UCL
. is there some arguement that goes with rnorm?
please supply an example
regards
Allan
***
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From 1
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From 1 April 2005: Department of Statistical Science, UCL
***
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From 1 April 2005: Department of Statistical Science, UCL, London
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fit on one
page? (If I would draw them by hand, no problem...)
Best,
Christian
***
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Fachbereich Mathematik-SPST/ZMS, Universitaet Hamburg
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From 1 April
The first try with mar=c(1,1,1,1) does the job!
Thanks,
Christian
On Mon, 21 Feb 2005, Liaw, Andy wrote:
You may want to set par(mar, oma) to something small, or start the device
(which one are you using?) with large enough dimension, or both.
Andy
From: Christian Hennig
Hi
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to print a 0.000, i.e.
without any significant decimal places.
Is it possible to do this somehow in R?
Thanks,
Christian
***
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Fachbereich Mathematik-SPST/ZMS, Universitaet Hamburg
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Hi,
is there a test for the H0 skewness=0 (or with skewness as test
statistic and normality as H0) implemented in R?
Thank you,
Christian
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# unregpoints: ignore...
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on the non-outliers is close to the normal and especially not
strongly skewed (the boxplot method
seems to be a bit more robust against skewness).
Christian
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Giraudoux
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,
Christian
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###
ich
a) Thank you, this works.
b) I meant qqmath, not qqnorm (you realized that).
Christian
On Fri, 2 Jul 2004, Deepayan Sarkar wrote:
On Friday 02 July 2004 09:00, Christian Hennig wrote:
Hi list,
I produced a trellis graphic with qqnorm (R-package lattice, no
changes in graphical
)?
It seems that neither ks.test nor chisq.test handle estimated parameters.
I am aware of function goodfit in package vcd, which seems to it for some
discrete distributions.
Thank you for help,
Christian
***
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, orientation, and distribution.
My impression though is that people think in terms of the covariance structure.
Where are these terms even defined?
Anyway, thanks for your help. Any insight would be greatly appreciated.
Ken
Christian Hennig [EMAIL PROTECTED] wrote:
Dear Ken,
in principle
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. There is an equivalent to the k-means target
criterion in terms of distances, and that uses squared Euklidean
distances. However, as far as I know, you cannot compute it directly in
R for any other distance. Using pam is the thing which comes closest.
Christian Hennig
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ich empfehle
clustering..and i may have to
consider using a different method,
...there are often good reasons for hierarchical clustering, so if
you know what you are doing, do not let the others confuse you..
***
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Fachbereich
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; distances between the regions are not available.)
Christian
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major1
minor8.0
year 2003
month10
day 08
language R
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Hi,
Martin Maechler told me that the following is an ESS and not an R-problem,
which can be solved (inside ESS) by
C-u C-h C-v sammon
Outside ESS, the problem does not occur (which I had not tried out
before).
Thanks,
Christian
On Fri, 16 Apr 2004, Christian Hennig wrote:
Hi list
to write 200 variable names down, as this is the real
size of powerdata.
Is there any way around that?
Christian
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Hi,
I have run rpart to construct a regression tree. Is there any simple
method to draw a nice picture of it, as it is usually done in books and
paper to visualize the tree?
Thank you,
Christian
***
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Fachbereich
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clustering).
Christian
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and '70s), or if
GiampS there are new indexes and methods I could include in
GiampS my study. I would really appreciate if you could
GiampS point me to some newer references addressing this problem.
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possible, I am not sure.
With regards,
Arnav
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(testgroups),classwt=c(0.49,0.02,0.49))
x1rf$test$confusion
12 3 class.error
1 9948 35 20 0.00549835
2 170 1823 0 0.08529854
3 4390 65 0.87103175
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me what goes wrong now?
Best,
Christian
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[EMAIL PROTECTED], http://www.math.uni-hamburg.de/home/hennig
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Christian Hennig
Fachbereich Mathematik-SPST/ZMS, Universitaet Hamburg
[EMAIL PROTECTED], http://www.math.uni-hamburg.de/home/hennig
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Christian Hennig
Fachbereich Mathematik-SPST/ZMS, Universitaet Hamburg
[EMAIL PROTECTED], http
would appreciate any reference
or pointer.
Regards
Vishal
***
Christian Hennig
Fachbereich Mathematik-SPST/ZMS, Universitaet Hamburg
[EMAIL PROTECTED], http://www.math.uni-hamburg.de/home/hennig
***
Christian Hennig
Fachbereich Mathematik-SPST/ZMS, Universitaet Hamburg
[EMAIL PROTECTED], http://www.math.uni-hamburg.de/home/hennig/
###
ich empfehle www.boag-online.de
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Christian Hennig
Seminar fuer Statistik, ETH-Zentrum (LEO
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