[R] compiling error R-2.4.0

Hi there, I am trying to install from the source R-2.4.0 on my mac (osx 10.4.8 G5 DP) The error imply Tcl/Tk. I install it by all the way I know: darwinport, the Tcl/Tk package from the dmg available from CRAN but without success. The PATH is correct. tclConfig.sh is localised in

Re: [R] package installation on Mac OS X 10.3.9

Hi, What is the R version you use? I am also working with OS X 10.3.9 and I got this error once with a older release of R. I found that when I used the 'superuser' it worked. either: $ sudo r and do the install as you did or: $ sudo R CMD INSTALL /path/to/your/package.tar.gz Best, David On

[R] command line completion in R?

Hi, I was wondering if there were a option to have command line completion in R like in the Bash shell? Best regards, David __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide!

[R] last command history???

Hi, I am using R 2.2.0 on Mac OS X 10.3.9. But I test the issue also with R 2.2.1 on OS X 10.4 (Tiger) I have a question regarding the functioning of the history from the command line. When I press the 'up-arrow' I call back the last command (everything ok), let's say that I go back until the

Re: [R] need palette of topographic colors similar to topo.colors()

-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 have a look at http://colorbrewer.org/ and install the package RColorBrewer David On Jan 7, 2006, at 20:34, bogdan romocea wrote: Dear useRs, I got stuck trying to generate a palette of topographic colors that would satisfy these two

Re: [R] transpose a matrix?

-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Not sure what you want from the explanation you gave but to transpose try that: x - as.matrix(x) x.trans - t(x) One method that's may also of use is help.search(transpose) David On Dec 20, 2005, at 17:26, t c wrote: I have a data set in the

Re: [R] transpose a matrix?

-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Not sure what you want from the explanation you gave but to transpose try that: x - as.matrix(x) x.trans - t(x) One method that's may also of use is help.search(transpose) David On Dec 20, 2005, at 17:26, t c wrote: I have a data set in the

Re: [R] memory tops out at 1.84gb on OS X 10.4 machine w/ 5GB ram

Hi, I don't know why, but I have a workaround maybe: You can load sequentially the file. Split the text file in 2 or 3 and re-associate the vector/list into r after. Once I was using a similar technic to write a huge matrix into a txt file. David On Dec 14, 2005, at 21:47, Ken Termiso wrote:

[R] Where ca I find the hcass2 Fortran code

Hi everybody, I am using R 2.2.0 under OS X 10.3.9. And I am working on the hclust function from the package STATS. Inside I found a call to a Fortran program hclust.f that I was able to find into the source distribution of R, but there is a also a call to a Fortran program hcass2. This very

[R] Error in opening .RData containing a genefilter object

Hi, I discover that when I save a workspace containing a genefilter (pkg from Bioconductor) object I cannot open no more after. I have to restore the .RData file from a backup to be able to start R again. I didn't upgrade to Version 2.2 but I'm not sure that it will solve the problem. Did

Re: [R] Error in opening .RData containing a genefilter object

Thanks a lot Professor Ripley, it works that way. I will upgrade to v 2.2 one day when I have time and see if it still happen. David On Oct 19, 2005, at 15:58, Prof Brian Ripley wrote: On Wed, 19 Oct 2005, Duncan Murdoch wrote: On 10/19/2005 8:37 AM, David Ruau wrote: Hi, I discover

Re: [R] Document clustering for R

Hi, We discovered that the package amap contain a distance calculation function call Dist which can calculate the distance according to a method call pearson which is in fact the not centered Pearson which seems to be the cosine distance. Could you tell me what do you think on that? Best

[R] (no subject)

Hi All, I want to print a square matrix of 7000 x 7000 into a text file. But I got a error after few hours of computation... write.table(MyDistMxDF, file = temp.csv, sep=,, quote=F) *** malloc: vm_allocate(size=8421376) failed (error code=3) *** malloc[2889]: error: Can't allocate

Re: [R] writing matrices (no subject)

guess at least 500MB). What are you going to do with a text file that large? Can you write it out in binary if you are reading it in with another program? If you are going to reread it with R, then 'save' would be a better choice. On 7/20/05, David Ruau [EMAIL PROTECTED] wrote: Hi All, I

Re: [R] R can not show plots (in Mac OS X terminal)

Hi, You should use X11. It doesn't work in Terminal. You can use the basic Xterm in X11 or like I do Aterm. David Ruau On Apr 5, 2005, at 20:12, Minyu Chen wrote: Dear all: I am a newbie in Mac. Just installed R and found R did not react on my command plot (I use command line in terminal). It did

[R] Does R work in 64 bit on apple G5?

Hi, I am working with R on 2xG5 1.8Ghz from Apple under 10.3.8 The G5 chip is 64 bits but does R run in 64 bit or 32 under OS X? How can know? I think it run in 32 bits... but not sure... anyway thanks for this fabulous soft... ;-) David __

Re: [R] Does R work in 64 bit on apple G5?

() used (Mb) gc trigger (Mb) Ncells 140949 3.8 35 9.4 Vcells 52967 0.5 786432 6.0 Did anybody use R with Xgrid? I am trying but it's not so easy to send the R job to the controller... David On Mar 23, 2005, at 18:44, Thomas Lumley wrote: On Wed, 23 Mar 2005, David Ruau wrote