list
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PLEASE do read the posting guide!
http://www.R-project.org/posting-guide.html
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada
http://socserv.mcmaster.ca/jfox
Dear Jose,
The mvtnorm package is indeed on CRAN. I'm not sure why you can't find it.
John
-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Jose
Sent: Wednesday, April 14, 2004 7:41 AM
To: [EMAIL PROTECTED]
Subject: [R] mvtnorm problems
Hi
Dear Simon,
I'm not sure that I follow this entirely, but if error variance decreases
with the level of the response, you could try raising the response to a
power greater than 1. Of course, the response has to be non-negative. You
might take a look at the spread.level.plot function in the car
Dear Ed and Erin,
-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Ed Hagen
Sent: Wednesday, April 07, 2004 12:51 PM
To: Erin Hodgess; [EMAIL PROTECTED]; [EMAIL PROTECTED]
Subject: Re: [R] Problems with rlm
Erin Hodgess wrote:
Please don't
guide!
http://www.R-project.org/posting-guide.html
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada
http://socserv.mcmaster.ca/jfox/
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Dear pnick,
If you search the r-help archives, you'll see that some time ago I posted a
Cochrane-Orcutt function. It's not clear to me, however, why you'd want to
use this in preference to the gls function in the nlme package.
I hope this helps,
John
-Original Message-
From: [EMAIL
Dear Marc,
I may misunderstand your question, so perhaps this answer isn't what you're
looking for:
A short time ago, Henrik Bengtsson posted a function to r-help (search for
plotSymbols in the list archive) that displays all available symbols. I
think that it's fair to say that fewer than 25
Dear Bob,
One approach would be to introduce a class of objects for which zero-based
indexing is implemented. Here's a simple example:
[.io0 - function(x, i) as.vector(x)[i + 1]
v - 0:10
class(v) - io0
v[0]
[1] 0
v[0:5]
[1] 0 1 2 3 4 5
Of course, a serious implementation would handle
Dear Baz,
I'm inclined to believe that your general advice is correct. As a long-time
APLer who came to R through Lisp-Stat, I think that it's generally a good
idea not to resist the most natural way of programming in R.
On the other hand, introducing a new class and defining methods for it
Dear Ivo,
The default na.action is na.omit, which behaves as you describe. Setting
options(na.action=na.exclude), or specifying the argument
na.action=na.exclude in the call to lm(), will produce residuals and other
case statistics that have NA for omitted observations. See ?na.exclude and
?lm
Dear Erin,
unlist(strsplit(xa, )) should give you what you want; note that you don't
need c() to define xa in your example.
I hope this helps,
John
-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Erin Hodgess
Sent: Sunday, March 28, 2004 12:03
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John Fox
Department of Sociology
McMaster
Dear Rogerio,
If the distances is the distance matrix, apply(distances, 1, min) should
give you what you want.
I hope this helps,
John
-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of
Rogério Rosa da Silva
Sent: Saturday, March 20, 2004 7:10 AM
Dear Neil,
In addition to Frank's observations, it's not a good idea to grow vectors
(here, control and test) in a loop. Doing so causes the vectors to be copied
over and over. While that doesn't make much difference for vectors with 11
elements, it can make a big difference in a large problem.
Dear Margarida,
Are you sure that the file is named experiencia1. Might it be named
experiencia1.sav or experiencia1.por?
I hope that this helps,
John
-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of
Margarida Júlia Rodrigues Igreja
Sent:
Dear Alex,
The anova() function doesn't take a type argument, producing the error.
Perhaps the Anova() function in the car package will do what you want.
I hope that this helps,
John
-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Hardouin Loïc
Dear Arnab,
Several people have already noted that you're getting predicted values on
the wrong scale. Note, as well, that you fit a logit model rather than a
probit model; for a probit model, you need family=binomial(probit), since
the logit link is the canonical link for the binomial family.
,
John
-Original Message-
From: Douglas Bates [mailto:[EMAIL PROTECTED] On
Behalf Of Douglas Bates
Sent: Friday, March 05, 2004 8:26 AM
To: Simon Fear
Cc: John Fox; Spencer Graves; [EMAIL PROTECTED]
Subject: Re: [R] row-echelon form (was no subject)
Simon Fear [EMAIL PROTECTED
Dear M. Kondrin,
If your GUI is written with the tcltk package, then you might take a look at
the Rcdmr package, which does approximately what you describe. You should be
able to adapt the approach taken there.
I hope that this helps,
John
-Original Message-
From: [EMAIL PROTECTED]
.
Regards,
John
-Original Message-
From: Spencer Graves [mailto:[EMAIL PROTECTED]
Sent: Wednesday, March 03, 2004 10:45 PM
To: John Fox
Cc: 'Aimin Yan'; [EMAIL PROTECTED]
Subject: Re: [R] row-echelon form (was no subject)
How does this compare with R of the qr decomposition? spencer
1.069045e+00
[2,] 0.00 0.65465370 -2.618615e+00
[3,] 0.00 0.0000 6.336077e-16
Regards,
John
-Original Message-
From: Spencer Graves [mailto:[EMAIL PROTECTED]
Sent: Thursday, March 04, 2004 9:31 AM
To: John Fox
Cc: 'Aimin Yan'; [EMAIL PROTECTED]
Subject: Re
Dear Amin,
I have a function (created just for demonstration, and reproduced below) for
finding the row-echelon form of a matrix. I'm sure that many list members
could produce something that's better numerically, but this should be OK at
least for toy problems.
John
- snip -
Dear Carlos,
prop.table() takes a table as its argument, so you could specify
prop.table(table(sex)). See ?prop.table for more details.
John
-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On
Behalf Of Carlos Mauricio Cardeal Mendes
Sent: Sunday, February 29,
Dear Muhammad,
One approach is:
class(hec.data) - table
as.data.frame(hec.data)
I hope that this helps,
John
-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of
Muhammad Subianto
Sent: Friday, February 27, 2004 6:28 AM
To: [EMAIL
Dear Marcos,
I don't see why you can't specify a MIMIC model using sem(), though you
might have to supply your own start values. When I have a chance, but
possibly not today, I'll check.
Regards,
John
John Fox
Department of Sociology
McMaster University
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario
Canada L8S 4M4
905-525-9140x23604
http://socserv.mcmaster.ca/jfox
-Original Message-
From: Chuck Cleland [mailto:[EMAIL PROTECTED]
Sent: Thursday, February
://www.stat.math.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905-525
of them in a
Microsoft Word document. Can any one tell me the easiest method of having
copies of the R-graphs in the Word documents?
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED
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PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
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John Fox
Department of Sociology
McMaster
?
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905-525-9140x23604
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removed Rcmdr and downloaded it again from CRAN, as well as
uninstalled R, reinstalling it from the copy of my download.
Doesn´t help so far.
Please help!
/CG
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
Ligges
This is in R-1.8.1 on WinXPPro.
Any help much appreciated!
Andy
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905-525-9140x23604
web
Dear Heberto,
beta is a vector? Then something like
lo -
try(nls(y~y0+a/(1+(x/x0)^b),start=list(y0=0.1,a=a0,x0=x00,b=-8.1)))
beta[i] - if (class(lo) == try-error) NA else lo$m$getPars()[4]
might do what you want.
John
On Mon, 09 Feb 2004 14:30:07 -0500
r.ghezzo [EMAIL PROTECTED] wrote:
Dear Gustavo,
To fill in other list members, this is occurring with code written to
augment the Rcmdr package.
The problem is that .numeric is a vector of names of numeric variables
in the active data set (data frame) maintained by Rcmdr, it is not
itself a data frame. Consequently, your
imputation of missing data that can be run from R?
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905-525-9140x23604
web: www.socsci.mcmaster.ca/jfox
primary1+primary2+... as per one post in the
archives, but it didn't work). If not, is it just for purposes of
displaying the data?
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905-525-9140x23604
web: www.socsci.mcmaster.ca/jfox
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Dear Jinsong,
Why do you say that the coefficients are wrong? The slope is 1 and the
intercept 0 (within rounding) -- Isn't this what you intended?
John
On Fri, 6 Feb 2004 08:50:36 -0800 (PST)
Jinsong Zhao [EMAIL PROTECTED] wrote:
Dear all,
The following is a example that I run and hope to
10.7
1975 7.9
...
mydata=data.frame(year=c(1970,...),snow.cover=c(6.5,...))
hist(mydata) does not work.
Many thanks.
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905-525
Dear Martin,
At 06:07 PM 2/4/2004 +0100, Martin Maechler wrote:
JohnF == John Fox [EMAIL PROTECTED]
on Wed, 04 Feb 2004 09:20:43 -0500 writes:
JohnF Dear Philippe, I suppose that you want a histogram
JohnF for snow.cover and not for year. There are several
JohnF ways to proceed
comparison showed significance of 32% level
Could this happen? and why? Please enlighten me.
]
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905-525-9140x23604
web
such a fraction be obtained from locfit (or sm) objects?
Stuart
John Fox
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McMaster University
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)? Thanks for your help.
---Harry Khamis
--
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John Fox
Department of Sociology
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Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905-525-9140x23604
web: www.socsci.mcmaster.ca/jfox
consistent by filtering the missing data before using lm().
I hope that this helps,
John
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905-525-9140x23604
web
0.200.68
x3 0.2 0.5
x4 0 0.24
thanks for any help on this.
Arnab
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905-525-9140x23604
web
1
[3,]111
I would have expected the identity matrix here.
I find the same result with every other square matrix I used.
BTW, I am using R 1.8.1 on Linux Mandrake 9.1
Cheers,
Federico Calboli
John Fox
Department of Sociology
McMaster University
email
to
likelihood theory and ML estimation ;-)
Thanks for any help/suggestion/tip,
Bruno
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905-525-9140x23604
web: www.socsci.mcmaster.ca
?
Thanks,
Jeff.
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905-525-9140x23604
web: www.socsci.mcmaster.ca/jfox
__
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get the background to be white instead of grey when I have
a cloud plot (using the lattices package)? par(bg=white) isn't
working. I'm assuming par commands won't work on lattice plots. What
should I use instead?
-
John Fox
Department of Sociology
read the posting guide! http://www.R-project.org/posting-guide.html
John Fox
Department of Sociology
McMaster University
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Dear Ted,
At 11:17 PM 1/12/2004 +, Ted Harding wrote:
On 12-Jan-04 John Fox wrote:
Dear Ted,
[...]
invisible(edit(df)),
or something equivalent, simply to look (and discard changes if they
are made).
Thanks for the reminder about invisible -- as well as junk-de(df)
one could use
with SPSS.
Who can help me as soon as possible?
Thanks
Deborah Renz
John Fox
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McMaster University
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startvalues and I
can't figure out how to fix it. Is anyone willing to read over my code
and help me out??? Please email me if you are willing to look at my code
and I will send it to you.
Thank you so much, and Happy New Year!
cathy
-
John Fox
into account. How can one get an anova table with the
adjusted sum of squares in R?
Thanks in advance,
Patrick Giraudoux
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
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email: [EMAIL PROTECTED]
phone: 905-525-9140x23604
web
the hypothesis
that *both*
coefficients are zero, where the t-tests do so
individually.
--- John Fox [EMAIL PROTECTED] wrote:
Dear Spencer and Alexander,
In this case, physician is apparently a factor
with
three levels, so
summary.aov() gives you a sequential ANOVA
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
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around the argument is.factor.result as if
it's part of the recode specifications. I believe that you want
FCI$PRE1 - recode (PRE1RES, c('C', 'c')=1 ; else = 0 ,
as.factor.result=FALSE )
I hope that this helps,
John
-
John Fox
Department
they refer the readers to external
builders of GUIs like the R-Commander of John Fox, Brodgar, TeXmacs,
SciViews etc.. On the other hand searching the mail archives for the word
R-GUI yielded well over 500 hits. After reading a few tens of those I
realized that there existed, after building R
) the
fixed version of plot.effect().
I apologize for the problem,
John
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905-525-9140x23604
web: www.socsci.mcmaster.ca/jfox
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905-525-9140x23604
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John Fox
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McMaster University
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John Fox
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is the best way to fit the model?
John Fox
Department of Sociology
McMaster University
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specifically, I have some plots that get axes with label
numbers in exponential format, and I'd like to change that to
non-exponential. Thanks!!
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL
-
uccurence matrices of type shown above?
Any help would be appreciated,
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905-525-9140x23604
web: www.socsci.mcmaster.ca/jfox
-calculation macros in SAS, by Ralph
O'Brien, at http://www.bio.ri.ccf.org/power.html. Apparently SAS Version
9.1 will have new procs power and glmpower, which will cover most of what
is in these macros.
Regards,
John
-
John Fox
Department
PROTECTED] http://jijo.cjb.net
GPG Fingerprint: 0CCA 8EE2 2EEB 25E2 AB04 06F7 1BB9 E634 9B87 56EE
---
John Fox
Department of Sociology
McMaster University
email: [EMAIL PROTECTED]
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-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905-525-9140x23604
web: www.socsci.mcmaster.ca/jfox
--
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
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provides
smooth nonparametric estimates of the hazard function using kernel methods.
Thanks to all,
John
At 03:06 AM 11/5/2003 +, Ted Harding wrote:
On 05-Nov-03 John Fox wrote:
Dear Monica,
I'm not sure what the muhaz function is (it's not in the survival
package), but regardless
?readline.
I hope that this helps,
John
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
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.
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need the stepwise calculation, as I would try to put it
in my own code (possibly in Visual Basic) to automate the task.
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905
-order interactions as well?).
Perhaps providing the following information would help: What is the model
formula? Which variables are factors? How many levels does each factor have?
Regards,
John
--- John Fox [EMAIL PROTECTED] wrote:
Dear Alexander,
If I understand you correctly, you have a sample
of models (mostly
decision
trees) for much, much larger data sets.
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Department of Sociology
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-
John Fox
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McMaster University
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parentheses
[1] 602 matches 517 matches
[3] 659 matches
posn - regexpr(\\(.*\\)$, Names)
substring(Names, first=posn+1, last=posn+attr(posn,match.length)-2)
Any idea?
Best regards,
Olivier
I hope that this helps,
John
-
John Fox
Department
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
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)
Thanks,
---
Rajarshi Guha [EMAIL PROTECTED] http://jijo.cjb.net
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone
to revise this document to make it more general.
I hope that this helps,
John
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905-525-9140x23604
web: www.socsci.mcmaster.ca/jfox
.
Regards,
John
At 01:49 PM 9/25/2003 -0400, Duncan Murdoch wrote:
On Thu, 25 Sep 2003 12:10:28 -0400, John Fox [EMAIL PROTECTED] wrote
:
Dear Martin
At 04:11 PM 9/25/2003 +0200, Martin Maechler wrote:
. . .
And many more packages have other *.pdf documents in their installed
./doc/ directories
consists entirely of numeric values, finding the
number of unique values in the data frame as a whole isn't much harder:
length(unique(as.vector(as.matrix(mydataframe
Regards,
John
John Fox
Department of Sociology
McMaster University
email: [EMAIL PROTECTED]
web
, I haven't
found an obvious candidate. Can you offer any help? (Yes I'm a newby.)
Yours sincerely
Christoph Hanck
Studentische Hilkskraft
Lehrstuhl für Empirische Wirtschaftsforschung, Prof. Dr. Wilfling
-
John Fox
Department of Sociology
McMaster
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.
-
John Fox
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McMaster University
Hamilton, Ontario, Canada L8S 4M4
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for your help + kind regards
unlist() should do what you want.
I hope that this helps,
John
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905-525-9140x23604
web
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905-525-9140x23604
web: www.socsci.mcmaster.ca/jfox
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[EMAIL PROTECTED] mailing list
https://www.stat.math.ethz.ch
Dear list members,
I've uploaded a new version of the Rcmdr package to CRAN. There are many
additions and (I hope) improvements, as indicated in the relevant portion
of the CHANGES file, reproduced below. As usual, comments, suggestions, and
bug reports are appreciated.
John
must have same length
what does this mean?
remko
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John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905-525-9140x23604
web: www.socsci.mcmaster.ca/jfox
8/13/2003 -0400, Haynes, Maurice (NIH/NICHD) wrote:
Has the Levene test of homogeneity of variance been implemented in any
library in R?
Thanks,
Maurice Haynes
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John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S
John Fox
Department of Sociolgy
McMaster University
http://socserv.mcmaster.ca/jfox
Original Message-
From: Simon Fear [EMAIL PROTECTED]
To: Prof Brian Ripley [EMAIL PROTECTED]
Cc: Peter Dalgaard BSA
0.0009 0 0 0
30.8101 0 0 0
464 0.1396 1 1 1
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John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905-525-9140x23604
web
0.03 0.00
Regards,
John
-
John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905-525-9140x23604
web: www.socsci.mcmaster.ca/jfox
Regression, Springer (in press - OK, not very
helpful here).
You might want to contact him privately (in CC).
Uwe Ligges
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John Fox
Department of Sociology
McMaster University
Hamilton, Ontario, Canada L8S 4M4
email: [EMAIL PROTECTED]
phone: 905-525
Dear Kjetil,
At 11:04 PM 7/21/2003 -0400, kjetil brinchmann halvorsen wrote:
On 18 Jul 2003 at 9:54, John Fox wrote:
Sorry for being so late coming back on this, I was travelling the
weekend. I tried to remove as much as possible from the workspace
(.RData file), but nothing created by Rcmdr
works for me under XEmacs/ESS under Windows, though
it's not a natural marriage.)
As a more general matter, I've encountered but been able to work around a
variety of focus problems using the tcltk package.
Regards,
John
-
John Fox
Department
split.data.frame split.data.frame-
[4] split.default split.screen split-
[7] split-.data.frame split-.defaultstrsplit
[10] unsplit
I hope that this helps,
John
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John Fox
Department of Sociology
McMaster University
Hamilton
startup icons, not with the
others! It happens when starting in a directory where I experimented
with the package Rcmdr by John Fox, and I guess that must have to do
with the problem. First, the startup message now includes
Loading required package: foreign
Loading required package: mva
Loading
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