[R] about the analysis of strings, thanks

2006-06-18 Thread ucecgxu
Dear R-helpers: thank your for your attention. i am a newer to R and i am doing some protein category classification based on the amino acid sequence.while i have some question urgent. 1. any packages for analysis amino acid sequence 2. given two sequences "AAA" and "BBB",how can i combine them

[R] analyze amino acid sequence (composition)of proteins

2006-06-18 Thread ucecgxu
Dear R-helpers: thank your for your attention. i am a newer to R and i am doing some protein category classification based on the amino acid sequence.while i have some questions urgently. 1. any packages for analysis amino acid sequence 2. given two sequences "AAA" and "BBB",how can i combine t

[R] r-help, how can i use my own distance matrix without using dist()

2006-01-18 Thread ucecgxu
Dear R-helpers, i am a beginner of R and i am using cluster package to do hierarchical clustering i am wondering if i can use my own distance matrix to do the hierarchical clustering without using dist() function. if i have my own distance matrix, how can i ask hclust() function to recongnize it