package:graphics" "package:grDevices" "package:utils"
[10] "package:datasets" "package:methods" "Autoloads"
[13] "package:base"
The packages
RSQLite
DBI
gsubfn
proto
were not detached.
Thanks in advance,
Paul
__
tät München
IBE - Institut für medizinische Informationsverarbeitung,
Biometrie und Epidemiologie
Marchioninistr. 15, D-81377 Muenchen
URL: http://ibe.web.med.uni-muenchen.de
Mail: Markus.Schmidberger [at] ibe.med.uni-muenchen.de
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setosa","NewName")
> Warning message:
> invalid factor level, NAs generated in: `[<-.factor`(`*tmp*`, list,
> value = "NewName")
>
> Thanks in advance your help,
>
> David
>
> __
> R-
the Introduction to R manual and look at ?data.frame,
?subset and ?"%in%"
On 9/4/07, Cory Nissen <[EMAIL PROTECTED]> wrote:
> Okay, I want to do something similar to SAS proc format.
>
> I usually do this...
>
> a <- NULL
> a$divisionOld <- c(1,2,3,4,5)
actor`(`*tmp*`, list,
value = "NewName")
Thanks in advance your help,
David
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major 2
minor 5.1
year 2007
month 06
day27
svn rev42083
language R
Anybody?
From: Cory Nissen
Sent: Tue 9/4/2007 9:30 AM
To: r-help@stat.math.ethz.ch
Subject: variable format
Okay, I want to do something similar to SAS proc format.
I usually do this...
a <- NULL
a$divisionOld <- c(1,2,3,4,5)
divisio
with all the other attributes attached to it and calculate distances
because it "knows" coordinates, a network of roads and so on.
I am not sure this helps but at least maybe gives you some ideas where to look
next.
Monica
Message: 53Date: Thu, 06 Sep 2007 14:42:32 -0400From: Philip
me if something is wrong or his
> conclusion concerning my model?
>
> Best regards,
> Olivier.
>
> ______
> R-help@stat.math.ethz.ch mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide
>
more carefully, you should have seen that
convhulln (geometry) will handle more than 3 dimensions.
Andy
> Thank you in advance.
>
> __
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> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE d
Others have already pointed out %in% but regarding your comment about
SQL, you can use SQL to manipulate R data frames using the sqldf package
which provides an interface to lower level RSQLite (and RMySQL in the future)
routines. The following examples use SQLite underneath:
DF <- data.fr
Hi R-users!!
I have some trouble with the survey pakage and i would be very glad if you
can give me an advice.
I have a sample from a survey where household were interviewed. The sample
has 4 criteria on which the stratification was based: REGION, SIZE OF
HOUSEHOLD, SIZE OF LOCALITY
Hi Greg,
Actually, I'm using the scatterplot function in the car namespace. My
understanding is that the scatterplot is turned into a boxplot when the x
variable is a factor, but I can't see that in the code of the function.
I've successfully modified the function to output regr
lem, the whole
> program stops. In my case, the 3rd nls() runs into a problem. I would
> still need the program to run the remaining 217 nls( )! Is there a way to
> make the program skip the problematic nls() and complete the ramaining
> nls()'s?
?try
>
>
>
> Your help will
s, so I am a
> little suprised... Could anyone tell me if something is wrong or his
> conclusion concerning my model?
>
> Best regards,
> Olivier.
>
> __
> R-help@stat.math.ethz.ch mailing list
> https://stat.ethz.ch/mailman/list
usion concerning my model?
Best regards,
Olivier.
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
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>
>design <- svydesign (id=~1, strata= ~regiune + size_loc +
age_rec_hhh + size_hh, data= tabel)
>and then weights(design)
>
> gives me: 1,1,1,1,1,1,1,1,1,1,1,... for each element
The weights are all 1 because you haven't told R how they should be
On Thu, 6 Sep 2007, Monica Pisica wrote:
>
> Hi,
>
> Doing more search i've discovered package RGDAL that can write a geotiff
> file with projection. I saved a geotiff file in UTM projection and if i
> read the file back in R and check the projection seems that everyt
am a code that returns a
> results showing
> matched observations like
>
> result: TRUE FALSE TRUE TRUE FALSE
>
> I am reading S programming, but I cannot find a way
> to do this.
>
> Thank you very much.
>
> Taka
>
> _____
Sciences immediately and delete this email.
Fra: [EMAIL PROTECTED] på vegne af Richard D. Morey
Sendt: fr 07-09-2007 03:28
Til: r-help@stat.math.ethz.ch
Emne: [R] contourplot lines, text, and mtext
If I have a contourplot (in the lattice package) and I want to add
straight lines to it, how do I
), calcConvexHull
(PBSmapping).
I also would like to know if there is a function that can be used for
finding convex hull in multi-dimensional case, that is more than 3-
dimension.
Thank you in advance.
__
R-help@stat.math.ethz.ch mailing list
turns a results showing
> matched observations like
>
> result: TRUE FALSE TRUE TRUE FALSE
>
> I am reading S programming, but I cannot find a way to do this.
>
> Thank you very much.
>
> Taka
>
> ______
> R-help@stat.math.e
Thank you very much.
Taka
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
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1
> [3] 2
> [4] 3
> [5] n
>
>
> Moreover, the values of pH and Formulation column are
> the combination questions. The values of pH and
> Formulation column should be the combinations such as
> (1.2, F), (1.2, S), (1.2, MF), (7
need that to
be in ascii, use ascii=TRUE in save(). You can get it back into R by
using load() or attach().
To "run data down the model", use predict(Rfobject, datatopredict) (see
?predict.randomForest).
What exactly do you want to print to a csv file, the prediction? See
?write or ?writ
I'm slowly clearing my back-log of r-help messages...
Please see reply inline below.
Andy
> From: Mathe, Ewy (NIH/NCI) [F]
> Hello,
>
>
>
> I am trying to explore the use of random forests for
> classification and
> am certain about the interpretation o
No one seemed to have picked up on this, so I'll take a stab:
You need to read para and meta into R as factors, and if you want the
coefficients to match the way you showed, you also need to take care that the
factor levels are in the same order as you showed in the coefficient table.
rch Assistant, Perception and Cognition Lab
University of M
issouri-Columbia
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On Thu, 6 Sep 2007, Nordlund, Dan (DSHS/RDA) wrote:
>> -Original Message-
>> From: [EMAIL PROTECTED]
>> [mailto:[EMAIL PROTECTED] On Behalf Of Duncan Murdoch
>> Sent: Thursday, September 06, 2007 4:54 PM
>> To: [EMAIL PROTECTED]
>> Cc: r-help@s
ers
--
View this message in context:
http://www.nabble.com/write.csv---string-extraction-and-field-limits-tf4395535.html#a12534347
Sent from the R help mailing list archive at Nabble.com.
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> -Original Message-
> From: [EMAIL PROTECTED]
> [mailto:[EMAIL PROTECTED] On Behalf Of Duncan Murdoch
> Sent: Thursday, September 06, 2007 4:54 PM
> To: [EMAIL PROTECTED]
> Cc: r-help@stat.math.ethz.ch; Philip James Smith
> Subject: Re: [R] computing distance in
On 9/6/07, Ted Harding <[EMAIL PROTECTED]> wrote:
> On 06-Sep-07 18:42:32, Philip James Smith wrote:
> > Hi R-ers:
> >
> > I need to compute the distance between 2 street addresses in
> > either km or miles. I do not care if the distance is a "shortest
>
Thank you for your useful response. I will study it carefully.
Best regards,
Phil Smith
(Ted Harding) wrote:
> On 06-Sep-07 18:42:32, Philip James Smith wrote:
>
>> Hi R-ers:
>>
>> I need to compute the distance between 2 street addresses in
>> either km
On 06/09/2007 7:36 PM, Roland Rau wrote:
> François Pinard wrote:
>> I wonder what happened, for R to hide the underlying Scheme so fully, at
>> least at the level of the surface language (despite there are hints).
>
> As far as I understood, the original version o
On Thu, 2007-09-06 at 16:40 -0700, Henrik Bengtsson wrote:
> On 9/6/07, Rolf Turner <[EMAIL PROTECTED]> wrote:
> >
> > On 7/09/2007, at 10:17 AM, (Ted Harding) wrote:
> >
> > > On 06-Sep-07 18:42:32, Philip James Smith wrote:
> > >> Hi R-ers:
> &
On 06/09/2007 6:17 PM, (Ted Harding) wrote:
> On 06-Sep-07 18:42:32, Philip James Smith wrote:
>> Hi R-ers:
>>
>> I need to compute the distance between 2 street addresses in
>> either km or miles. I do not care if the distance is a "shortest
>> driving
On 9/6/07, Rolf Turner <[EMAIL PROTECTED]> wrote:
>
> On 7/09/2007, at 10:17 AM, (Ted Harding) wrote:
>
> > On 06-Sep-07 18:42:32, Philip James Smith wrote:
> >> Hi R-ers:
> >>
> >> I need to compute the distance between 2 street addresses in
> &
François Pinard wrote:
> I wonder what happened, for R to hide the underlying Scheme so fully, at
> least at the level of the surface language (despite there are hints).
As far as I understood, the original version of Ihaka/Gentleman was
written in Scheme. But even if you look at the
stics
-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Ted Harding
Sent: Thursday, September 06, 2007 3:18 PM
To: Philip James Smith; r-help@stat.math.ethz.ch
Subject: Re: [R] computing distance in miles or km between 2 street addre
On 06-Sep-07 18:42:32, Philip
On 7/09/2007, at 10:17 AM, (Ted Harding) wrote:
> On 06-Sep-07 18:42:32, Philip James Smith wrote:
>> Hi R-ers:
>>
>> I need to compute the distance between 2 street addresses in
>> either km or miles. I do not care if the distance is a "shortest
>> driving
On 06-Sep-07 18:42:32, Philip James Smith wrote:
> Hi R-ers:
>
> I need to compute the distance between 2 street addresses in
> either km or miles. I do not care if the distance is a "shortest
> driving route" or if it is "as the crow flies."
>
> Does an
[Chris Elsaesser]
>> I mainly program in Common Lisp and use R for statistical analysis.
>> While in R I miss the power and ease of use of Lisp, especially its
>> many primitives such as find, member, cond, and (perhaps a bridge too
>> far) loop. Has anyone created a
)! Is there a way to
> make the program skip the problematic nls() and complete the ramaining
> nls()'s?
>
>
>
> Your help will be highly appreciated!
>
> Yuchen Luo
>
>[[alternative HTML version deleted]]
>
> ___
Hi R-ers:
I need to compute the distance between 2 street addresses in either km
or miles. I do not care if the distance is a "shortest driving route" or
if it is "as the crow flies."
Does anybody know how to do this? Can it be done in R? I have thousands
of addres
ope this will be a useful package for those interested in test
linking. I invite any comments and suggestions.
Take care
--
Jonathan Weeks
Doctoral Candidate
School of Education
University of Colorado, Boulder
[EMAIL PROTECTED]
303-517-9666
___
R-packages m
en Luo
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> Dear all,
> When I use aggregate function as:
>
> attach(warpbreaks)
> aggregate(warpbreaks[, 1], list(wool = wool, tension = tension), sum)
>
> The results are right but I get a warning message:
> "number of items to replace is not a multiple of replacement length
treatment combinations. This looks like a incomplete latin
square design. Is there any function in R to create such design? Thanks a lot!
Lei Liu
Assistant Professor
Division of Biostatistics and Epidemiology
Department of Public Health Sciences
School of Medicine
University of Virginia
3181 Hospital
are
[EMAIL PROTECTED]
(801) 408-8111
> -Original Message-
> From: [EMAIL PROTECTED]
> [mailto:[EMAIL PROTECTED] On Behalf Of Yves Moisan
> Sent: Thursday, September 06, 2007 2:34 PM
> To: r-help@stat.math.ethz.ch
> Subject: [R] text in boxplots
>
>
> Hi A
plots-tf4394528.html#a12530892
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a
as they are?
Thanks,
Monica
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PLEASE
gt; From: [EMAIL PROTECTED]
> [mailto:[EMAIL PROTECTED] On Behalf Of Monica Pisica
> Sent: Thursday, September 06, 2007 1:24 PM
> To: r-help@stat.math.ethz.ch
> Subject: [R] larger decimal numbers get rounded
> Importance: High
>
>
> Hi,
>
> I am sure there is a r
Not all of us are familiar with lisp (I have done a little, but not
enough to really understand what you are asking). If you tell us what
find, member, cond, and loop do, or what functionality you are looking
for, then we will have a better chance of telling you how to do the same
in R.
Just
On 9/6/07, GOUACHE David <[EMAIL PROTECTED]> wrote:
> Hello R-helpers,
>
> I'm trying to add labels to points in xyplot graphs, but I want lo label only
> those points which have a certain level of my grouping variable, and have
> encountered a few problems.
> An exa
Thank you very much for help. I am learning R every day
Taka
Quoting Peter Dalgaard <[EMAIL PROTECTED]>:
> [EMAIL PROTECTED] wrote:
>> Dear R-users,
>>
>> I have encountered the following problem every now and then. But I
>> was dealing with a very sma
tes and i don't want them rounded how can i keep them as they
> are?
>
> Thanks,
>
> Monica
> _
>
>
> e=wlmailtagline
> [[alternative HTML version deleted]]
>
> ___
[EMAIL PROTECTED] wrote:
> Dear R-users,
>
> I have encountered the following problem every now and then. But I was
> dealing with a very small dataset before, so it wasn't a problem (I
> just edited the dataset in Openoffice speadsheet). This time I have to
> deal w
See ?count.fields to get a vector of how many fields are on each line.
Also fill = TRUE on read.table() can be used to fill out short lines if
that is appropriate.
On 9/6/07, [EMAIL PROTECTED] <[EMAIL PROTECTED]> wrote:
> Dear R-users,
>
> I have encountered the following proble
Hi,
Doing more search i've discovered package RGDAL that can write a geotiff file
with projection. I saved a geotiff file in UTM projection and if i read the
file back in R and check the projection seems that everything is OK. But if i
load the file in ArcGIS (ESRI product) i get the wa
Reduce, Filter and Map are part of R 2.6.0. Try ?Reduce
On 9/6/07, Chris Elsaesser <[EMAIL PROTECTED]> wrote:
> I mainly program in Common Lisp and use R for statistical analysis.
>
> While in R I miss the power and ease of use of Lisp, especially its many
> primitives such as
Dear R-users,
I have encountered the following problem every now and then. But I was
dealing with a very small dataset before, so it wasn't a problem (I
just edited the dataset in Openoffice speadsheet). This time I have to
deal with many large datasets containing commuting flow da
ut
> it looks ugly. Yes, when loading the data in R you could easily clean
> it up automatically... doable.
> You can add a space. Then it will not show, but you have to remember
> that if you ever use the data for labels etc. You shouldn't need to do
> that in the first place.
Yes, and then you save it, you open it again... same behaviour.
The only way I found around it was to insert a character at the
beginning of every element in such columns. An apostrophe works, but
it looks ugly. Yes, when loading the data in R you could easily clean
it up automatically
I mainly program in Common Lisp and use R for statistical analysis.
While in R I miss the power and ease of use of Lisp, especially its many
primitives such as find, member, cond, and (perhaps a bridge too far)
loop.
Has anyone created a package that includes R analogs to a subset of Lisp
m with an easy solution. But it isn't. There are
> too many variations.
>
> > A similar problem occurs in R's read.table() function when a factor
> > has levels that can be interpreted as numbers.
>
> at least with read.table you can specify the classes of each c
itute for Cell & Molecular BiologyFax: +44 (0)131 6507360
Swann Building, Mayfield Road
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Edinburgh EH9 3JR
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
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ot; is not the same.
It seems like a problem with an easy solution. But it isn't. There are
too many variations.
> A similar problem occurs in R's read.table() function when a factor
> has levels that can be interpreted as numbers.
at least with read.table you can specify the classe
ey know better than you what you want to do.
>
> --- David Scott <[EMAIL PROTECTED]> wrote:
>
>>
>> A common process when data is obtained in an Excel
>> spreadsheet is to save
>> the spreadsheet as a .csv file then read it into R.
>> Experienced us
Servien remi ([EMAIL PROTECTED]) wrote:
>I want to use splines to estimate a function but i want to force the
>interpolation to be monotone. Is this possible with R ?
There are a few options. You can use mono.con in mgcv (see the example code in
?pcls), or smooth.monotone in fda. In b
licitly with save(list =
> ls(all=TRUE), file = ".RData", ascii = T).
> >
> > Paul.
> >
> >
> > - Original Message
> > From: Gabor Grothendieck <[EMAIL PROTECTED]>
> > To: Paul August <[EMAIL PROTECTED]>
> > Cc: r-help@stat.math.ethz.ch
Or:
> sort(levels(interaction(LETTERS[1:3], 1:3, sep = "")))
[1] "A1" "A2" "A3" "B1" "B2" "B3" "C1" "C2" "C3"
Marc
On Thu, 2007-09-06 at 11:46 -0400, Liaw, Andy wrote:
> Or something like:
Or something like:
R> do.call(paste, c(expand.grid(LETTERS[1:3], 1:3), sep=""))
[1] "A1" "B1" "C1" "A2" "B2" "C2" "A3" "B3" "C3"
(The ordering is bit different, but that shouldn&#x
nivariate function (like a distribution
>> function for
>> example) ?
>
> approxfun() might be what your looking for.
>
> Is the result of approxfun() inevitably monotonic ?
> --
> View this message in context: http://www.nabble.com/Monotonic-
> interpolation-tf4392288.
>
>
> Bert Gunter
> Genetech Nonclinical Statistics
>
>
> -Original Message-
> From: [EMAIL PROTECTED]
> [mailto:[EMAIL PROTECTED] On Behalf Of excalibur
> Sent: Thursday, September 06, 2007 8:04 AM
> To: r-help@stat.math.ethz.ch
> Subject: Re: [R] Monotonic interpola
Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of excalibur
Sent: Thursday, September 06, 2007 8:04 AM
To: r-help@stat.math.ethz.ch
Subject: Re: [R] Monotonic interpolation
Le jeu. 6 sept. à 09:45, excalibur a écrit :
>
> Hello everybody, has anyone
Is the result of approxfun() inevitably monotonic ?
--
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ht
t your looking for.
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
> now is cbind(lista[[1]],lista[[2]],...,lista[[50]]). I guess there would be
> an easy way of doing this. Could anyone give me some advice?
> --
> View this message in context:
> http://www.nabble.com/creat-list-tf4391162.html#a12519637
> Sent from the R help mailing list archive
to restart your R.
Xingwang Ye
Uwe Ligges wrote:
>
>
> Xingwang Ye wrote:
>> Dear all,
>> When I use aggregate function as:
>>
>> attach(warpbreaks)
>> aggregate(warpbreaks[, 1], list(wool = wool, tension = tension), sum)
>>
>> The results are righ
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self
Hello R-helpers,
I'm trying to add labels to points in xyplot graphs, but I want lo label only
those points which have a certain level of my grouping variable, and have
encountered a few problems.
An example dataframe that goes with the following code is at the end of this
message.
1st
deleted]]
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data=tabel)
HTH,
Tobias
P.S. See http://faculty.washington.edu/tlumley/survey/
for all information relating to this package.
--
Tobias Verbeke - Consultant
Business & Decision Benelux
Rue de la révolution 8
1000 Brussels - BELGIUM
+32 499 36 33 15
[EMAIL PROTECTED]
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?cor perhaps
--- elyakhlifi mustapha <[EMAIL PROTECTED]>
wrote:
> Hello,
> I thougth that there is a function which does the
> kendall test in R,
> I writed on the console apropos("kendall") and I
> didn't found anything can you tell me how could I do
k Ph: (+45) 35327918
~~ - ([EMAIL PROTECTED]) FAX: (+45) 35327907
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Hi,
I want to read a ascii-file using the function read.table.
With 'skip' and 'nrows' I can select the rows to read from this file.
Is there a way to select columns (in the selected rows)?
Thanks,
Ingo
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the point, but it is a bit fortuitous that it works at
all (split the first group at 50 and you'll see).
This (or at least something like it) should sort according to left
endpoints:
o <- order(as.numeric(sub("-.*", "", dat$Interval)))
dat[o,]
> ?
>
> Paul
>
&g
gt;> now is cbind(lista[[1]],lista[[2]],...,lista[[50]]). I guess there would
>> be
>> an easy way of doing this. Could anyone give me some advice?
>
>
> matrix(unlist(lista), ncol=50)
>
> Uwe Ligges
>
> ______
> R-help@st
ons estimates
in contrast to estimate
the
parameters B in Regression Analysis, isn't it?
I hope I could explain my trouble clearly,
Thanks,
Niki
-
[[alternative HTML version deleted]]
___
t; heatmap(x = dataM, RowSideColors = RowSideColors,
> ColSideColors=ColSideColors, main = title,
>margins = c(50,50), scale= do.scale ,labRow=geneNames,
> labCol=colLabels, col = hmcol, cex.main = 1,
>cexRow = row.lab.mag, cexCol = col.lab.mag)
>
> > session
ut
Desired_dat <- dat[match(dat$Interval,sort(dat$Interval)),]
?
Paul
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
> an easy way of doing this. Could anyone give me some advice?
matrix(unlist(lista), ncol=50)
Uwe Ligges
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PLEASE do read the posting guide http://www.R-project.org/po
give me some advice?
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to insert the projection in valid PROJ.4
format. Then:
writeGDAL(SGDF, "volcano.tif", drivername = "GTiff", ...)
using the options= id needed, to pass through create options as on:
http://www.gdal.org/frmt_gtiff.html
For follow-ups, plea
s Var3) to another table that
> can be reused later. I'm new to R and your help is highly appreciated!
>
>
coefficients(summary(glm()))
Uwe Ligges
>
> Eric
>
>
> [[alternative HTML version deleted]]
>
> ____
Stefan Grosse wrote:
> On Thursday 06 September 2007 09:48:22 elyakhlifi mustapha wrote:
>
> em > I thougth that there is a function which does the kendall test in R,
> em > I writed on the console apropos("kendall") and I didn't found anything
> em > ca
00-200 1082
200-300 744
300-400 4213
Thanks in advance.
Best regards,
João Fadista
[[alternative HTML version deleted]]
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w can repeat this process for an unknown number of entries in the list? In
> other words, how shall I index M1?
>
Hi Diana,
To step through the matrices in your list (assuming that it only has one
level):
for(mat in 1:length(D)) {
}
Jim
_
t know how to fix my problem.
Thank you!
-
Luggage? GPS? Comic books?
[[alternative HTML version deleted]]
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PLEASE do read th
ultiple of replacement length."
>
> BTW: I use R version 2.4.1 in Ubuntu 7.04.
Does not happen for me, neither with R-2.4.1 nor with recent versions of
R. Maybe you have redefined one of the used objects (aggregate,
warpbreaks, wool, tension, sum) in one of your environments?
BTW: Is
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