[R] Biobass, SAGx, and Jonckheere-Terpstra test

2006-06-30 Thread Chris Andrews
Horace, Last year I found another Jonckheere-Terpstra function at http://www.biostat.wustl.edu/archives/html/s-news/2000-10/msg00126.html Using that and the version in SAGx and wanting a few other options, I created the version below. Hope it is useful, Chris -- Christopher Andrews, PhD SUNY

[R] Biobass, SAGx, and Jonckheere-Terpstra test

2006-06-29 Thread Horace Tso
Hi list, I tried to load the package SAGx and failed because it complains it's looking for the Biobass which is not there. Then I looked up the package list and Biobass is not found. I'm trying to run the Jonckheere-Terpstra test and from what I see in the R archive, SAGx is the only place it's

Re: [R] Biobass, SAGx, and Jonckheere-Terpstra test

2006-06-29 Thread Prof Brian Ripley
It is *Biobase*. That is part of BioC (www.bioconductor.org), although I agree that it should make clear where to get non-CRAN packages. (Worse: SAGx used not to require it, and only the update to the most recent version does.) On Thu, 29 Jun 2006, Horace Tso wrote: Hi list, I tried to