Dear help group,
Just fyi a markov chain is a sequence of transitions between states (say
A,T,G,C - on a gene) with a given probability for each transition. In this
case there'd be 16 different kinds, each with a different weight.
Given a transition matrix (4x4) filled with all
: maandag 6 februari 2006 5:26
To: r-help@stat.math.ethz.ch
Subject: [R] generating markov chain
Dear help group,
Just fyi a markov chain is a sequence of transitions between states (say
A,T,G,C - on a gene) with a given probability for each transition. In this
case there'd be 16 different
]
[mailto:[EMAIL PROTECTED] Behalf Of Norman Goodacre
Sent: maandag 6 februari 2006 5:26
To: r-help@stat.math.ethz.ch
Subject: [R] generating markov chain
Dear help group,
Just fyi a markov chain is a sequence of transitions between states (say
A,T,G,C - on a gene) with a given
:37:13 -0800
To: Ingmar Visser [EMAIL PROTECTED]
Cc: Norman Goodacre [EMAIL PROTECTED], r-help@stat.math.ethz.ch
Subject: Re: [R] generating markov chain
On 2/6/06, Ingmar Visser [EMAIL PROTECTED] wrote:
You can use the following, with x your transition matrix
y=numeric(100)
x=matrix(runif
On 2/6/06, Ingmar Visser [EMAIL PROTECTED] wrote:
Linda,
That depends on what you want to do. There are a number of packages dealing
with Markov type models: msm, depmix and hmm.discnp, and then there are all
the graphical models packages, some of which can do similar stuff.
Hth, ingmar
I
