I can keep the pace of R development.
Paul.
- Original Message -
From: Prof Brian Ripley <[EMAIL PROTECTED]>
Date: Friday, March 30, 2007 1:56 am
Subject: Re: [R] Using functions in LAPACK in a C program
To: Paul August <[EMAIL PROTECTED]>
Cc: r-help@stat
On Fri, 30 Mar 2007, [EMAIL PROTECTED] wrote:
Hi,
I wonder if anyone knows a study dealing with the minimum valid number of
observations when using CART?.
I have no idea what you mean by 'valid' here.
Could you answer the question for logistic regression to indicate to us
what form of answer
Well, write.table works on 'tables', that is matrix-like objects.
An object summary is not matrix-like.
You may be looking for
capture.output(print(taulu3), file="O:/taulu1.txt")
On Fri, 30 Mar 2007, Lauri Nikkinen wrote:
> Dear R-users,
>
> I'm trying to export object taulu3 from R to a text
Please to both of you: check the advice in the R 2.5.0 alpha version of
the rw-FAQ. That has worked for everyone else who has reported a problem
with installing packages on Vista.
I've placed a copy online at
http://www.stats.ox.ac.uk/pub/R/rw-FAQ.html
specifically
http://www.stats.ox.ac.uk/pub
On Thu, 29 Mar 2007, Paul August wrote:
> Hi,
>
> I wonder where I can find an example of using a function in LAPACK
> library in a user's own C code.
In about 20 R packages, e.g. the recommended package mgcv.
> I wrote a C program which will be
> compiled and linked to produce a DLL file and
On Fri, 16 Mar 2007, simon bond wrote:
> I found that the following code crashes R (version 2.4.0 in windows).
>
>> x=rnorm(10,0.1,1)
>> library(nlme)
>> gls(x~0)
>
> I quickly found a work-around for what I was trying to do, but I thought
> I should report this.
This will be fixed (to give a se
We don't know what document that is, and you haven't given us a useful
pointer, have you? And the authors (presumably Roger Peng and Jan de
Leeuw) deserve credit.
The definitive documentation is the 'Writing R Extensions' manual which
ships with R. There is also a lot in 'S Programming' (see
We have already seen three solutions.
I don't like to see the use of c() for its side effects. In this case
Marc's as.vector seems to me to be self-explanatory, and that is a virtue
in programming that is too often undervalued.
On Wed, 28 Mar 2007, Marc Schwartz wrote:
> On Wed, 2007-03-28 at
That is not the only way to apply logistic regression to this problem
(although it is a common error in the analysis of cancer studies).
One can discretize time and apply logistic regression to survival over
each short time period (jointly): doing so comes pretty close to what the
Cox proporti
On Wed, 28 Mar 2007, Jeff Lusk wrote:
> After reading the help files (?Startup) and using
> RSiteSearch("defaultPackages"), I have been trying to add several packages
> to my default startup list using the following code:
>
> local({
> old<-getOption("defaultPackages")
> options(defaultPackages=c(
On Wed, 28 Mar 2007, [EMAIL PROTECTED] wrote:
>
> Dear all,
>
> I have some C code using the zlib uncompress. It compiles fine under Win XP
> (with SP2) with R up to 2.3.1 and generates four files (Makedeps, *.d,
> *.dll, and *.o):
No one every said that zlib interface would be exported from R, a
On Wed, 28 Mar 2007, [EMAIL PROTECTED] wrote:
> The Vista issue is not innocent as it threatens the life of R within
> large corporations. So any posts on how R runs under Vista and what has
> to be done to make it work and what cannot be done etc will be very
> useful.
See the rw-FAQ in the R
Reposting the same message is not making it any easier for your audience
to understand.
You need to tell us what you mean by your subject line and 'jackknife
reclassification'. Given these are far from standard terms, either you
mean something else (and 'jackknife' is very frequently misused
HERBICIDE is already a factor, and this works without the unneeded
factor() calls.
Notice that you used a different version of nlme in R 2.4.0 and R 2.4.1,
so you have not established that the change in R version is responsible.
In fact, it is not: it is caused by the update of nlme to 3.1-78 an
This is an internet access problem (there is missing space in the message
that has been corrected since 2.4.1)
The issue is
> Warning: unable to access index for repository
> http://cran.wustl.edu/src/contrib
That is an issue specific to your setup, but why is someone mailing from
an Indian ad
Yes, sqlDrop does not work correctly for Excel worksheet names (and there
are other quirks).
As I said in another message, it is on my TODO list to make this work
better, but in the absence of good documentation of what the Excel ODBC
driver should do and several with known bugs it is largely a
On Mon, 26 Mar 2007, ian white wrote:
> Dear R-help,
>
> I am trying to use a package (not from CRAN) which includes two shared
> library (.so) files. The maintainer suggests inserting two lines
> in /usr/bin/R,
>
> LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:path-to-package/lib
> export LD_LIBRARY_PATH
(
I really don't know what is going on here, beyond that 'utils' has not
been loaded.
But
1) You are not supposed to edit system files like library/base/R/Rprofile.
If you do, don't ask for help!
2) I don't see how the output shown came from the input shown: almost
surely it did not.
3) It is e
On Mon, 26 Mar 2007, [EMAIL PROTECTED] wrote:
> what is the command to give me the listing of the loaded packages.
?search
?sessionInfo
(sessionInfo massages the output of search() to show only packages).
> I mean which are active and not the listing of all the installed
> packages as given by
Assuming this is about the R (D)COM server from
http://cran.r-project.org/contrib/extra/dcom/00ReadMe.html
please note that it has its own mailing lists (accessed via the link on
that page). You will need to tell people the versions of everything you
used (as the R posting guide asked you to).
On Sun, 25 Mar 2007, Jean lobry wrote:
x <- matrix(1:4,2,2)
mosaicplot(x)
# This one is OK
mosaicplot(x, sort = 1:length(dim(x)) )
please, seq_len(dim(x)) is designed for this task.
# Not OK, I have the following error message:
Erreur dans mosaicplot.default(x, sort = 1:length(dim(x))) :
This is simply user error: the column names _are_ written to the pipe.
Because the connection was not open, the connection is opened to write the
column names, closed, opened to write the data and then closed.
In any case, you should call close() on connections you create to avoid
leaking connec
On Sun, 11 Mar 2007, NOEL Yvonnick wrote:
> Dear R users,
>
> I'm trying to have a gWiddgetsRGtk2 script run under R-2.4.1. The script
> run OK under Linux but all accentuated characters appear as "?" when the
> script is run under Windows.
>
> As Gtk+ requires UTF-8, I thought it was the source o
On Fri, 23 Mar 2007, Erin Hodgess wrote:
> Dear R People:
>
> I am in the process of creating an R package via Windows.
>
> If I would decide to submit in to CRAN, what would I need to
> do in order to make it run for the Linux or Mac People, please?
If it passes R CMD check on Windows it should
But the request was for a *generic* solution. On Windows there
might not be anything corresponding to a home directory (and the rw-FAQ
discusses the concept and how R resolves this).
The best answer I know of is path.expand("~").
On Fri, 23 Mar 2007, Henrik Andersson wrote:
> Sys.getenv("HOME"
On Fri, 23 Mar 2007, Prof Brian Ripley wrote:
> The problem is that way the ODBC driver exposes table names is not valid
> SQL, and nor is the way quoting has to be used. You can get around this
> via direct SQL sent by sqlQuery. In addition, by default the Excel ODBC
> driver gi
PDF does not have orientation: just set the width > height in pdf() to get
a 'landscape' plot.
The 'horizontal' option in postscript() was originally (in S/S-PLUS)
designed for sending plots direct to a printer: pdf() does not have that
option either.
On Fri, 23 Mar 2007, Sebastian Weber wrote
The problem is that way the ODBC driver exposes table names is not valid
SQL, and nor is the way quoting has to be used. You can get around this
via direct SQL sent by sqlQuery. In addition, by default the Excel ODBC
driver gives you read-only access to worksheets.
Searching the list archives
n zoo RDCOMClientMASS
> xtablesurvivalsvSocketsvIO R2HTML svMisc
> "1.1-7""0.1-10" "2.3-8" "1.2-1""0.91-0""7.2-30"
> "1.4-2" "2.30" &
On Thu, 22 Mar 2007, Schiller Judith 1541 EB wrote:
> hi,
>
> I've troubles with some difftime objects. e.g.
>
> ISOdate(2001, 4, 26) - ISOdate(2001, 2, 26) - 2
>
> works, telling me "Time difference of 57 days". But when I'd like to add
> days, such as
>
> ISOdate(2001, 4, 26) - ISOdate(2001, 2,
On Thu, 22 Mar 2007, Martin Maechler wrote:
>> "Steven" == Steven McKinney <[EMAIL PROTECTED]>
>> on Wed, 21 Mar 2007 19:29:43 -0700 writes:
>
>Steven> I get the same problem, and haven't
>Steven> figured it out yet.
>
>Steven> Is it a 32bit/64bit clash?
>
> Well, I can ins
What is 'Unix' here? It seems you mean ppc64 Linux (which is not Unix).
On Wed, 21 Mar 2007, Mark W Kimpel wrote:
I am having trouble getting an install of RCurl to work properly on a
Unix server. The steps I have taken are:
1. installed cUrl from source without difficulty
2. installed RCurl
On Wed, 21 Mar 2007, Chuck Cleland wrote:
> Liaw, Andy wrote:
>> I verified the result from the following with output from JMP 6 on the
>> same data (don't have SAS: don't need it):
>>
>> set.seed(631)
>> n <- 100
>> dat <- data.frame(y=rnorm(n), A=factor(sample(1:2, n, replace=TRUE)),
>>
On Wed, 21 Mar 2007, Mark Fisher wrote:
> I am new to R. I installed version 2.4.0 some time ago and I find that
> some packages I want to use require 2.4.1. I am using Windows XP. Do I
> need to uninstall R first before running the setup file for 2.4.1 or
> does the setup file "do the right thing
On Wed, 21 Mar 2007, Dave Ewart wrote:
> On Wednesday, 21.03.2007 at 14:07 +0800, Berwin A Turlach wrote:
>
>>> All help/suggestions/appreciated!
>>
>> The calculations are done in floating point arithmetic, not integer
>> arithmetic. From the help page on `choose' one might already guess
>> so mu
On Tue, 20 Mar 2007, Bernardo Rangel Tura wrote:
> On Wed, 2007-03-07 at 09:33 -0800, Bricklemyer, Ross S wrote:
>> I was finally able to get R to 'configure', 'make', and 'install' on
>> Mandriva 2007. Itried to install gnomeGUI and I received an error. See
>> below. At what step do I make R
You need to read the documentation for your ODBC driver manager
(presumably iODBC) on your unstated OS. You do need to set up a DSN or
driver and the error message is that you have not done so.
[I have used iODBC in the past but no longer do so. As I recall Debian
Linux has it set up in a non
On Mon, 19 Mar 2007, Jonathan Wang wrote:
> On 3/16/07, Richard M. Heiberger <[EMAIL PROTECTED]> wrote:
>> I can't imagine using Windows without Emacs.
>> In particular, the Windows ports of Emacs are very aware
>> of the operating system and usually make the right assumptions.
>>
>> The type of b
On Sun, 18 Mar 2007, Tim Keitt wrote:
> I can't seem to find this anywhere. How do I set the default CRAN
> repository _site wide_ on a linux box? What I want to do is eliminate
> the pop-up list of repository locations when using
> 'install.packages()'. I know how to do this for a single account.
This is really a GGobi issue not an R issue, but I believe their mailing
lists are down.
I think you are assuming that it is rggobi.dll that cannot be found, but
that is not what the message says. I would have expected Windows to give
you a dialog box telling you the exact problem, and I suspe
AFAIK there is no get_all_vars() in any released version of R, and this is
NOT the place to report on unreleased ('Under development (unstable)')
versions of R (and especially not on non-current versions). (Please use
the R-devel list to comment on current development versions.)
This was fixed
On Sun, 18 Mar 2007, [EMAIL PROTECTED] wrote:
> Hi - I'm quite wondering what makes the lag operator does not work for my
> time series. I have a time series of length about 20 elements. I would
> like to have a lag 1 of this time series. I did the following:
>
> logprice = log(price, base=e
The problem here is that setting par(mfg =) does an implicit par(new=TRUE)
on the next plot (as otherwise it would advance to the next position).
That is going to be confusing if there has been no plot, and that is what
you are seeing: the first plot is done at c(1,1), overriding the setting
of
what do you mean by 'send the figure to pdf'?
My guess is that this is a Mac-specific question (e.g. you are using the
R.app GUI), so please consider if this is the appropriate list.
On Fri, 16 Mar 2007, Kubovy Michael wrote:
> Dear r-helpers,
>
> When I do an xYplot and display the result in a
On Fri, 16 Mar 2007, Alberto Monteiro wrote:
> Ted Harding wrote:
>>
>>> alpha <- 0.3
>>> beta <- 0.4
>>> sigma <- 0.5
>>> err <- rnorm(100)
>>> err[15] <- 5; err[25] <- -4; err[50] <- 10
>>> x <- 1:100
>>> y <- alpha + beta * x + sigma * err
>>> ll <- lm(y ~ x)
>>> plot(ll)
>>
>> ll is the output
It seems you are using f90, but FLIBS was computed using g77. That would
mean that something has been altered since R was configured, or that the
way the Fortran compiler was specified was incorrect.
I think you need to start again and make use of only one set of compilers.
On Fri, 16 Mar 2007
On Fri, 16 Mar 2007, Gad Abraham wrote:
> Andrew Robinson wrote:
>> Hi Gad,
>>
>> try:
>>
>>
>>> class(a)
>> [1] "Arima"
>>> getAnywhere(print.Arima)
>
> Thanks Andrew.
>
> For the record, the standard error is the square root of the diagonal of
> the covariance matrix a$var.coef (itself obtained
On Fri, 16 Mar 2007, Richard D. Morey wrote:
> While using the rmvnorm function, I get the error:
>
> Error in eigen(sigma, sym = TRUE) : error code 5 from Lapack routine
> 'dsyevr'
>
> The same thing happens when I try the eigen() function on my covariance
> matrix. The matrix is a symmetric 111x
This is much easier in R-devel: just use message() and scan("stdin").
gannet% cat Test.R
message("Enter file name: ", appendLF=FALSE)
fn <- scan("stdin", what="", n=1)
works for me in R-devel via R --vanilla -f Test.R > Rout.txt
I believe it also works under Windows.
On Wed, 14 Mar 2007, John S
It is inefficient to use which() rather than a logical index, since you
allocate two numeric index vectors (one the length of the original
vector) and use an interpreted function rather than optimized C code.
Also, in this usage which() handles NAs incorrectly.
I think the clearest answer is pro
On Fri, 23 Feb 2007, Alfonso Sammassimo wrote:
> Dear List,
>
> Thankyou to Jim and Marc for their help on my previous question.
>
> I have a data frame of five columns, the first being a list of dates and the
> other four columns are numeric values. I wanted to list the days where all 4
> columns
On Thu, 22 Feb 2007, Martin Olivier wrote:
> I have some problems to compute the residuals from a glm model with
> binomial distribution.
>
> Suppose I have the following result :
> resfit<-glm(y~x1+x2,weights=we,family=binomial(link="logit"))
>
> Now I would like to obtain the residuals . the co
On Thu, 22 Feb 2007, Aalim Weljie wrote:
> Hello,
>
> I had a couple questions about manova modeling in R.
>
> I have calculated a manova model, and generated a summary.manova output
> using both the Wilks test and Pillai test.
>
> The output is essentially the same, except that the Wilks lambda
On Thu, 22 Feb 2007, Petr Klasterecky wrote:
> Ranjan Maitra napsal(a):
>> On Sun, 18 Feb 2007 07:46:56 +0000 (GMT) Prof Brian Ripley <[EMAIL
>> PROTECTED]> wrote:
>>
>>> On Sat, 17 Feb 2007, Ranjan Maitra wrote:
>>>
>>>> Dear list,
>&
What are D and M? 'Index' here could be a number or a name.
In either case, df[[D]] would be the equivalent of df$D.
However, your computation does not need a loop at all, let alone two.
Try something like
tmp <- with(df, paste(D, m))
dates <- unique(tmp)
On Wed, 21 Feb 2007, Alp ATICI wrote
On Wed, 21 Feb 2007, Ranjan Maitra wrote:
> I was wondering if it is possible to get the p-values for one-sided
> tests on the parameters of a linear regression.
>
> For instance, I use lm() and store the result in an object. lm() gives
> me a matrix, using summary() and coef() on which gives me
BSD manual for math(3)
> says:
>
> The log2() and nan() functions are missing, and many functions
> are not available in their long double variants.
>
>
> I do not know how to locate the library that contains function log2, sorry.
> What can I do next to help?
>
This really is the wrong list for C programming questions related to R.
See the posting guide and consider R-devel.
See also the debugging advice in 'Writing R Extensions'.
Almost certainly your C code has destroyed R structures, most likely by
writing outside array bounds. Running under valgri
; implemented in nls or optim is preferred?
Yes, unless perhaps you are trying to achieve a perfect fit, when all bets
are off for nls.
>
>
> Prof Brian Ripley wrote:
>> Well, the algorithm used does not affect the confidence interval
>> (provided it works correctly), but what
Well, the algorithm used does not affect the confidence interval (provided
it works correctly), but what is nls.ml (presumably in some package you
have not mentioned) and why would I want to use an old-fashioned
algorithm?
You could start nls at the solution you got from nls.ml and use confint(
The problem is that rgl is apparently written for GNU make, and has (as
shipped)
ifdef MAKINGAGL
[EMAIL PROTECTED]@ -Iext
[EMAIL PROTECTED]@
else
PKG_CPPFLAGS= -If:/R/R-2.4.1/src/extra/zlib -DHAVE_PNG_H
-If:/R/R-2.4.1/src/gnuwin32/bitmap/libpng -Iext
PKG_LIBS=-lgdi32 -lopengl32 -lglu32
-Lf:/R/
On Tue, 20 Feb 2007, Steven Finch wrote:
Hello!
I written several implementations in R of Rémy's algorithm for
generating random ordered strictly binary trees on 2n+1 vertices.
One implementation involves manufacturing character strings like:
"X <- list(0,list(0,0))"
for the case n=2. If I
On Tue, 20 Feb 2007, Ranjan Maitra wrote:
> Hi Duncan,
>
> I don't know if this will list all the dependencies for your
> documentation, since Rick's error messages did not involve libraries and
> header files already installed by him for something else, perhaps.
It will not, and most of this i
On Tue, 20 Feb 2007, Marc Schwartz wrote:
> On Tue, 2007-02-20 at 10:17 -0800, Randy Zelick wrote:
>> Hello all,
>>
>> I use R on both windows and a "mainframe" linux installation (RedHat
>> enterprise 3.0, which they tell me is soon to be upgraded to 4.0). On
>> windows I installed the package gp
That's not it (the function is 'coef' not 'coeff', and R can tell
functions and lists apart).
If you read the help page for polr you will see you could have used
Hess=TRUE. It works then. THAT is why we needed an example, to see how
you used the function.
On Tue, 20 Feb 2007, Michael Dewey
This is a function of your data and the tuning parameters you chose to
use. See ?tree.control.
On Tue, 20 Feb 2007, stephenc wrote:
> Hi
>
> I am trying to use tree() to classify movements in a futures contract. My
> data is like this:
>
> diff dip dim
FAQ Q7.31
On Tue, 20 Feb 2007, Todd A. Johnson wrote:
> Hi All-
>
> This seems like such a pathetic problem to be posting about, but I have no
> idea why this testcase does not work. I have tried this using R 2.4.1,
> 2.4.0, 2.3.0, and 2.0.0 on several different computers (Mac OS 10.4.8,
> Windo
Is /usr/lib/lam in your ld search path? This sort of message usually
means a shared library cannot be found. You do need lam-libs as well
according to yum.
R CMD ldd /usr/lib/R/library/Rmpi/libs/Rmpi.so
/sbin/ldconfig -p | grep /usr/lib/lam
might be illuminating.
There are various problems w
You are missing the OpenGLU headers. On FC5 they are in mesa-libGLU-devel
From the README:
REQUIREMENTS
Windowing System (osx/carbon, unix/x11 or win32)
OpenGL Library
OpenGL Utility Library (GLU)
On Mon, 19 Feb 2007, Rick Bilonick wrote:
I'm running R 2.4.1 (with the latest
(An R-devel topic, I believe.)
I would have documentation for options() in the package that documented
the additional options and linked to \code{\link[base]{options}}.
Users will be given a choice of which page to view on most systems, so
just make sure the title makes clear that this is option
On Mon, 19 Feb 2007, Johannes Graumann wrote:
> On Monday 19 February 2007 11:53, Prof Brian Ripley wrote:
>> do.call("pmax", dataframe[,intensityindeces])
> Thank you very much for your help!
>
> Any idea why do.call("pmax",list(na.rm=TRUE),dataframe[,inten
do.call("pmax", dataframe[,intensityindeces])
if I understand you aright.
On Mon, 19 Feb 2007, Johannes Graumann wrote:
> Dear all,
>
> Can anyone please shed some light onto how to do this?
>
> This will give me all "intensity" columsn in my data frame:
> intensityindeces <- grep("^Intensity",n
You seem never to have told R or us what charset these data are in. I
think it is likely that they are being transferred in latin2 (like your
email), and you are running R in UTF-8 according to Sys.getlocale. So
what you need to do is to either
1) Run R in latin2
or
2) use iconv() to conver
On Sat, 17 Feb 2007, Ranjan Maitra wrote:
> Dear list,
>
> I have a 4-dimensional array Y of dimension 330 x 67 x 35 x 51. I have a
> design matrix X of dimension 330 x 4. I want to fit a linear regression
> of each
>
> lm( Y[, i, j, k] ~ X). for each i, j, k.
>
> Can I do it in one shot without
I think he is missing fill=TRUE, which is the default for read.csv but not
read.table. (As Ted Harding implied but as I recall did not spell out.)
If you want to read a file as text, used readLines. You can then extract
the lines you want and use read.table on a textConnection from just those
Well, if it is missing, how do you know what level to turn it back into?
That is what NA means in R: not available.
If you want missings to be a separate level, you could use
factor(as.character(X), exclude=NULL)
[1] A B
Levels: A B
BTW, using summary() for a length-3 object is not helpf
On Fri, 16 Feb 2007, Brian Healey wrote:
> R users;
>
> A question about optimization within R.
>
> I've been using both optim() and nlminb() to estimate parameters and all
> seems to be working fine. For context (but without getting into specifics -
> sorry), I'm working with a problem that is kn
On Fri, 16 Feb 2007, Marc Schwartz wrote:
On Fri, 2007-02-16 at 15:39 +, Sérgio Nunes wrote:
Just for the record, here are my steps for producing a date based histogram.
Data is stored in a file where each line only has a date - 2007/02/16
d<-readLines("filename.dat")
d<-as.Date(d, format
On Fri, 16 Feb 2007, Anthony Staines wrote:
> Hi,
> I have a valid SPSS .sav file (which I can open happily in SPSS v11 on
> Windows XP).
>
> Opening it in R2.41 on Linux we get this message :-
>
>> HSE3023 <- read.spss("HSE.sav")
> Error in read.spss("HSE.sav") :
> error reading system-file
It looks like you are trying to use package DBI (without telling us). That
is of no use without a specific DBMS interface, e.g. packages RMySQL,
ROracle and RSQLite.
AFAIK, there is no DBI interface to PostgreSQL. RODBC works well, RJDBC
may well work (if Java works for your system) and there
On Thu, 15 Feb 2007, Johannes Graumann wrote:
> How do I make R use the use.names option in a context like this:
What 'use.names option'? sapply has a USE.NAMES argument, but lapply does
not.
> lapply(data, function(x)(read.table(x,quote="",header=TRUE,sep="\t")),
> use.names=TRUE)
'data' is
On Tue, 13 Feb 2007, Adam D. I. Kramer wrote:
> Hello,
>
> I've got what I'd expect to be a pretty simple issue: I fit an aov object
> using multiple error strata, and would like some significance tests for the
> contrasts I specified.
It _is_ covered on the relevant help page. See the 'split' a
'should work', yes.
Do what he asked for (in any reasonable reading), no.
> set.seed(1)
> library(mvtnorm) ## you both omitted to mention that
> X <- rmvnorm(n=10,mean=1:2,sigma=matrix(c(1,0.5,0.5,1),2,2))
> var(X)
[,1] [,2]
[1,] 0.4878773 0.1238040
[2,] 0.1238040 0.9508090
For
plot(raw=TRUE) does this for you: there is little point in fitting by
orthogonal polynomials and then converting back.
As the help page says quite explicitly, poly() does not store the
orthogonal polynomials: please also consult the reference it gives. It
also points out that predict() creates
If you look at boxplot.default you will see that it calls boxplot.stats to
compute the statistics used. So you can make renamed copies of both
functions and alter them to behave as you like. (Because of namespace
issues, you cannot just use your own boxplot.stats.)
I am not sure why you would
This is a mismatch of compiler between the machine that the code was
compiled on and that running the code.
>> '/usr/lib/R/library/POP.R/libs/ezlic20.so':
>> libstdc++-libc6.2-2.so.3: cannot open shared object file: No such file
libstdc++-libc6.2-2.so.3 is a g++ runtime. On my FC5 system it is
You mean the 'subset' argument to model.frame and not subset() the
function, I think.
The answer is on the help page for model.frame[.default].
All the variables in 'formula', 'subset' and in '...' are looked
for first in 'data' and then in the environment of 'formula' (see
the
-level n-args solution handling NAs is quite a lot faster.
On Fri, 9 Feb 2007, Martin Maechler wrote:
>>>>>> "TL" == Thomas Lumley <[EMAIL PROTECTED]>
>>>>>> on Fri, 9 Feb 2007 08:13:54 -0800 (PST) writes:
>
>TL> On 2/9/07, Pr
On Fri, 9 Feb 2007, Frank E Harrell Jr wrote:
[...]
> I looked in all the code for the Hmisc and Design packages and didn't find a
> single example where pmin or pmax did not have 2 arguments. So I think it is
> important to have pmin2 and pmax2.
Why? Do you have any reason to suppose that t
The other reason why pmin/pmax are preferable to your functions is that
they are fully generic. It is not easy to write C code which takes into
account that <, [, [<- and is.na are all generic. That is not to say that
it is not worth having faster restricted alternatives, as indeed we do
with
This is FAQ Q7.22
On Fri, 9 Feb 2007, Albert Vilella wrote:
> Hi all,
>
> I am trying to plot a list of densityplots as png files, but when I do
> it in a for loop, I get empty png files as a result.
>
> If I manually run the instructions inside the loop, it works... any hints?
>
> library(lattic
ery useful system, my sincere thanks goes to R developers!
>
>
>
> -Lauri
>
>
> 2007/2/8, Prof Brian Ripley <[EMAIL PROTECTED]>:
>>
>> ?options, look for 'width'.
>>
>> I don't know what OS this in: the Windows Rgui has an optio
It is part of the VR bundle and should be in all R installations, as a
recommended package.
Did you try
> library(class)
? If that really does not work, please re-install R.
On Fri, 9 Feb 2007, XinMeng wrote:
> Hello sir:
> Where can I download the package "class"?
> What I can find is only:
?options, look for 'width'.
I don't know what OS this in: the Windows Rgui has an option to set the
width to the width of the console, but you can override it.
On Thu, 8 Feb 2007, Lauri Nikkinen wrote:
> Hi R-users,
>
>
>
> A newbie question: assume that I have for example 30 columns in my
> dat
Probably you have no write permission in the current directory. That
message means (as it says) that the process cannot open the file for
writing, and that is not an R issue.
On Thu, 8 Feb 2007, Mahieux Dimitri wrote:
Hi,
When I want to output a png file, I have the following error message
I think you do understand it. Indexing a data frame by a logical matrix is
provided just for applications like this and the reverse,
mydf[is.na(mydf)] <- something
prettyR's toNA seems to believe that data frames can be other than 2D,
which is surprising.
On Thu, 8 Feb 2007, Olivier ETERRADOS
I don't think anyone have answered the actual question yet.
The answer is simple: the search path for search is '.', the current
directory. Just as it is for almost all the software on your system
except binaries and package addons (including, e.g. R's search path for
packages).
But R is a
We don't know what 'Linux' is here. What Linux distribution, what are
your C and Fortran compilers (in detail, e.g. from gcc --version and g77
--version)?
We need to see the tail of tests/Examples/base-Ex.Rout.fail to know what
went wrong.
If you can supply those pieces of information we can
We still do not have reproducible code, but a 'dataframe' is not a matrix.
And I would expect a covariance matrix to have the same row and column
names: the examples do.
On Wed, 7 Feb 2007, Alistair Campbell wrote:
> Thanks for that Brian,
>
> I have worked through the examples. They work becaus
els
> The role of dispersion parameter for the Gamma family is rather
> different. This is a parametric family which can be fitted by maximum
> likelihood, including its shape parameter
>
>
> Jill Willie
> Open Seas
> Safeco Insurance
> [EMAIL PROTECTED]
>
>
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