was
just checking whether there was
a quicker way. Thanks.
See (you won't believe it): ?example
Uwe Ligges
Mark
**
This email and any files transmitted with it are confidentia...{{dropped
Vincent Deng wrote:
Dear R-helpers,
When plotting a graph, what command should I use to mark legend to the
margin area of that graph?
Example:
plot(1:10)
par(xpd=TRUE)
legend(8,11.5,Hello World)
Uwe Ligges
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LaTeX binaries must be in the path (but probably they already are ...).
Also, where would I get Rd.sty, please?
The supported LaTeX distributions are told to look into the right place
by the R CMD tools. And this is: path-to-R/share/texmf/Rd.sty
Uwe Ligges
Thanks,
R Version 2.2.1 Windows
(graphics,plot)
exportClasses(dog)
exportMethods(plot,show)
You don't export any other functions?
Uwe Ligges
thanks yet again,
Sincerely,
Erin
mailto: [EMAIL PROTECTED]
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Evgeniy Kachalin wrote:
Uwe Ligges пишет:
Evgeniy Kachalin wrote:
Hello, dear participants!
Could you tip me, is there any simple and nice way to build
scatter-plot for three different types of data (, and o and * -
signs, for example) with legend.
Now i can guess only that way
, 4.4, legend = unique(as.character(Species)),
pch = unique(as.integer(Species
Uwe Ligges
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PLEASE do read the posting guide! http://www.R
Jonathan Baron wrote:
On 01/07/06 10:51, John Sorkin wrote:
The situation
would be greatly helped if the mailing list would automatically add a header
or
footer to all Email messages giving the URL of the archived Email threads.
Don't
expect people to know that what are not told! Those
an
array, if there are not too many classes.
Uwe Ligges
Thanks in advance
Steve
Steve Friedman, Assistant Professor
Center for Global Change and Earth Observations
Michigan State University
East Lansing, Michigan 48824
Phone - 517 - 648 - 6290
Does all work for me with the latest release of R (2.2.1) and ctv
(0.3-1) on Windows NT 4.0 SP6.
Hence: Which version of R, which version of ctv, and which OS do you use?
Uwe Ligges
Mark Andersen wrote:
Hello,
I am just beginning to use R, after several years of using S-Plus
script.
Its like the argv concept of perl.
Do I pass the arguments through my $cmd in the perl script?
If yes, then how to access that in the R script?
Any help will really be appreciated.
See ?commandArgs
Uwe Ligges
Thanks and Regards,
Madhurima
) explains how to compare and how to use index
operations. Please don't ask on R-help for your homework questions, but
please read the posting guide.
Uwe Ligges
Thanks
GS
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at the end.
Have a look at help.start() -- Search Engine Keywords -- Section
Keywords by Topic.
Uwe Ligges
For those who happen to know it, I find the Emacs Lisp Reference
Manual to be a good example for organising, in a very usable way,
a comprehensive reference to a flurry of library
version of kidpack?
b) Which version of kidpack?
c) Which OS?
d) Which version of R?
Uwe Ligges
Best,
Yufen Huang
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7
I'd like to plot the mean of 'value' against week. Is there a direct way
of doing this or do I have to make a new structure with the calculated
values and then plot it?
For your data.frame X, you want, e.g.:
A - aggregate(X, list(X$week), mean)
plot(A$week, A$value)
Uwe Ligges
in the R Installation and Administration manual.
Perhaps you can live with the CRAN package rJava (there is a binary
Windows version available).
Uwe Ligges
Neil Eastep.
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colors this is 256^3.
Uwe Ligges
Best Regards...
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/posting-guide.html
Yes, please do!
Uwe Ligges
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problems.
Uwe Ligges
Hadley
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Παναγιωτα Γεωργουλια wrote:
I have recently used R in a statistical analysis and I need to use a
reference...
If you would be kind enough to help me I would be grateful!
Please read either the message at the very beginning of your R session,
the R FAQ, or ...
and type:
citation()
Uwe
device say B.
All your plotting will now go into device B until you close it by
dev.off(), then all further plotting goes into device A - unless you
start another device.
Uwe Ligges
But the pdf document created is empty.
How do these functions work ?
Thank you very much
=abc[i])
}
R still used 8 colors of abc color codes repeatedly to draw the diagram
Any helps?
No, it does not (in fact, all appears to be more or less black on my
screen ;-)). Another example:
plot(1:255, col=rgb(1:255,0,0,maxColorValue = 255))
Uwe Ligges
Best Regards...
On 12/27/05
the contributed packages from the C:\Programme\R221 to the
C:\Programme\R2.2.1- location in the files system?
It is safe to copy.
Uwe Ligges
or have i to download and install the packages new?
greetings from the snowy austria
merry christmas
helli
system
R.2.2.0
win xp
prior to base that have the same names as some objects in base).
Uwe Ligges
Simon Pickett
Centre for Ecology and Conservation Biology
University of Exeter in Cornwall
Tremough Campus
Penryn
Cornwall
TR10 9EZ UK
Tel: 01326371852
__
R
P Ehlers wrote:
This might not be the preferred way, but can one not also
do this by appropriately assigning .libPaths?
But then better use a clean library of contributed packages and not
another R version's standard library.
Uwe Ligges
Peter Ehlers
Uwe Ligges wrote:
Helmut
are using, and your OS.
Uwe Ligges
Cheers,
Marco
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PLEASE do read the posting guide! http://www.R-project.org
to have a list of vectors?
You certainly do not want to transpose a data frame with both factors
(or character) and numeric values in it.
Uwe Ligges
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message of lmer()?
Please read the posting guide and send information that is helpful for
the helpers to help.
Uwe Ligges
I am using:
$platform: i386-pc-linux-gnu
$arch: i386
$os: linux-gnu
$system: i386, linux-gnu
$major: 2
$minor: 0.1
$year: 2004
$month: 11
$day: 15
Sincerely
- rnorm(10)
y - x*5
return(list(x=x, y=y))
}
result - foo()
result
Uwe Ligges
Many Thanks
Andy Cox
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PLEASE do read the posting guide! http://www.R
linda.s wrote:
Why I got warning from the following code?
assign(x, c(10, 5, 4, 2, 2))
y - c(x, 0, x)
y
[1] 10 5 4 2 2 0 10 5 4 2 2
v - 2*x + y + 1
Read the Warning message and try to interpret it
If you still do not get the point:
(length(x)*2+1) == length(y)
Uwe
]
install.packages(x)
Uwe Ligges
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PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
(Ted Harding) wrote:
Hi Folks,
This query arises out of a call for help from a friend
who has been running R version 1.9 unbder Windows XP,
and wanted advice on using install.packages() in order
to install the Windows binary of the package Epi.
Since this environment is outside my
error message:
Error in [.data.frame(data, tapply(LRT, tp, function(x) which(LRT == :
invalid subscript type
Works for me. Look at your data structures and check whether your data
frame is OK.
Or much better easier:
tapply(LRT, tp, max)
Uwe Ligges
I don't know what to do
/posting-guide.html
Please ask a local statistical consultant for help.
Uwe Ligges
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between 4 and 6? If that's the case, how do I do that?
Is this a homework question?
Uwe Ligges
Davia S. Cox
517-575-8031 cell
[EMAIL PROTECTED]
Human potential, though not always apparent, is there waiting to be
discovered and invited forth. -William W. Purkey
arbitrarily. It does not happen when smaller
bits are pasted subsequently.
I use linux suse 9.3 with the latest version of R
... because of the limited buffersize of your clipboard.
I'd suggest source()-ing a file rather than pasting those many lines of
code.
Uwe Ligges
- if(h1) mp1b else subset(mp1b,cluster_q==h)
Uwe Ligges
Assistance is appreciated.
-
[[alternative HTML version deleted
mode?
Put the data.frame in a seperate file and source that one.
Uwe Ligges
Thanks,
joerg
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, it is not very nice to use names twice ...
Uwe Ligges
thank you...
with regards,
eric.
-
[[alternative HTML version deleted
on vectors?
Uwe Ligges
What's interesting is, if I use the area function from library(MASS), it
works:
lossdistribution-function(p,Beta,R=0.4){
+ area(function(x){lossdensity(x,Beta,R)},0.1,p)}
lossdistribution(.02,Beta,.4)
[1] 0.0002177284
I could just go ahead and use
).
Whenever I try commands like persp it wants ordered values.
The only command that approximates what I want is scatterplot3d
(see
below)
library(scatterplot3d)
scatterplot3d(a,b,c)
For a surface, see ?persp or ?wireframe in package lattice.
Uwe Ligges
Can anybody help
[EMAIL PROTECTED] wrote:
I am trying to plot a figure within a figure (an inset that shows a closeup of
part of the data set). I have searched R-help and other sources but not found
a
solution.
See the examples on the grid package by Paul Murrel in R News.
Uwe Ligges
What I would like
Yogesh K. Tiwari wrote:
Hi,
If I am ploting a world map like
plot (lon,lat)
then how to draw a continent boundry in that
plot.
What is the command...
See, e.g., the packages maps, mapdata, and mapproj as well as the
task view Spatial on CRAN.
Uwe Ligges
Many thanks
Regards
(calculate(3,4))
Please read An Introduction to R as well as the posting guide!
Uwe Ligges
But R says that z does not exist...
How can I use z in an another function ?
Thank you for your answer...
--
David
[[alternative HTML version deleted
Charles H. Franklin wrote:
What is a simple way to convert a factor into a matrix of dummy variables?
fm-lm(y~f)
model.matrix(y~f)
Uwe Ligges
where f is a factor takes care of this in the estimation. I'd like to
save the result of expanding f into a matrix for later use.
Thanks
#which should be 2/3.
var(c(1,2,3,4,5))
[1] 2.5 #which should be 10/5=2
it seems to me that the program uses (sample size -1) instead of sample
size at the denominator. how can i rectify this?
Simply change it by:
x - c(1,2,3,4,5)
n - length(x)
var(x)*(n-1)/n
if you really want it.
Uwe
Doran, Harold wrote:
Sorry, didn't think about that. The mirror I used was
http://lib.stat.cmu.edu/R/CRAN/
Please check the R-help archives. It is well known that the StatLib
mirror has serious problems these days.
Uwe Ligges
I checked other mirrors and they did work fine
to do
this for vector c of matrix A.
To get all correlation coefficients:
cor(A, B)
Which p-value do you mean, those from cor.test?
You can get all by:
apply(A, 2, function(x)
apply(B, 2, function(y) cor.test(x,y)$p.value))
Uwe Ligges
Vivien W. Chen
that the package meintainer decided not to run this part of the
examples by R CMD check, hence it is unchecked (and nobody traced the
bug before).
Uwe Ligges
Has anybody experienced the same problem?
Or may you easly see where am I wrong?
Thanks in advance and regards,
Julio
the package maintainer about documented but
unavailable functions ...
Uwe Ligges
Many thanks in advance and regards. Julio
-
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of functions or algorithm to estimate this closed
form transformation? It could involve any trug, algebraic functions
etc...
Without having a model, it seems to be unsensible to look for such a
function, since there may be an infinte number of functions fullfilling
your criterion.
Uwe Ligges
behaves well, you can be
lucky, if it does behave really ill, you will get grey hair during your
further research on this topic ...
Please read some textbook on numerical optimization.
Uwe Ligges
regards
andreas
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does [checked by R CMD check] mean?
The source of an R package can be checked by the command
R CMD check package_name
(on a Unix/Linux machines; on Windows machines this is slightly different).
In fact, it is exactly the same command on Windows.
Uwe Ligges
Further information
August Berg wrote:
The source of an R package can be checked by the command
R CMD check package_name
(on a Unix/Linux machines; on Windows machines this is slightly
different).
In fact, it is exactly the same command on Windows.
Uwe Ligges
Why it did not work for me?
library
Martin Maechler wrote:
UweL == Uwe Ligges [EMAIL PROTECTED]
on Thu, 01 Dec 2005 08:37:37 +0100 writes:
UweL [EMAIL PROTECTED] wrote:
hi all,
I load a table with headers that enable me to acces it by the column
names:
tab-read.table(blob/data.dat,h=T
.
I call
R CMD INSTALL --docs=normal depmix
and I get the following error:
make[3]: *** No rule to make target 'C:/rw2011/include/R.h', needed by
derdist.o. Stop.
You probably did build from a poluted directory containing an old
.../src/Makedeps file. Remove it and try again.
Uwe
manual) and call R CMD INSTALL from the commandline.
For questions on the availability of BioC Windows binary packages please
contact the Bioconductor folks and use their mailing list (after looking
for documentation why kidpack is not available for Windows, of course).
Uwe Ligges
tom wright wrote:
Can someone please explain why this wont plot. The cats example given
for the colAUC function will plot.
Please report bugs in packages to the package maintainer rather than to
R-help.
Uwe Ligges
Many thanks again
tom
#
library(caTools
for your answers
see ?colnames
Uwe Ligges
guillaume.
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nobody answered is that the answer on your question is
something like: R and its 600 packages.
Please be more specific which class of models you are going to use.
You have to be MUCH MORE specific to get a sensibe answer.
Uwe Ligges
ANIL KUMAR( METEOROLOGIST GR -II) LRF SECTION
do I get to ssomewhere in
between -0.6 and 0.2?
Please give an example which value somewhere in between -0.6 and 0.2
you want to get. Do you want to sample from some distribution, do you
want the mean, do you want all values in steps of 1/1000
Uwe Ligges
Thanks
Eric Jennings
%*%
The Message in English: Error in a %*% a: no applicable message for
%*%.
What can I do?
1. Ask the package maintainer of kinship for a bugfix (CCing).
2. you can still use the %*% operator from the base namespace:
base::%*%(a,a)
Uwe Ligges
Thank you.
Sven Knüppel (Germany - Berlin
of data1b) within each list
element.
I tried to do it with lapply(data, myfunction,...), but I dont know if
Without having tested:
myfunction - function(x, var){
cor(x[[1]][[var]], x[[2]][[var]])
}
lapply(data, myfunction, var=var1)
Uwe Ligges
theres a way to index the two vars
to get a structure of an object but:
sss-structable(Titanic)
str(sss)
Error in [.structable(x, args[[1]], ) : subscript out of
bounds
Looks like package vcd needs a separate structable method for the str()
generic.
Uwe Ligges
Finally I learned, that I need to change attributes
)
Yes, use points() to add dots, and the invisibly returned value of
barplot() contains information on the postition of the bars.
Uwe Ligges
sorry if the questions are too simple
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[EMAIL PROTECTED] wrote:
Hello,
I try to define a global variable.
You should not do that unless you really know why you want it this way.
You probably want to read the R Language Definition manual.
Anyway, read ?assign if you want to proceed doing dangerous things.
Uwe Ligges
My
somewhere ?
No, looking 10 seconds into the code, but why do you not read it
yourself? It is easily understandable and you will also see at once that
you can will get a performance boost by optimizing that code
Uwe Ligges
Yours sincerelly, Tommi Viitanen
for a different way
to integrate winedit with R.
Well, at least to integrate WinEdt. ;-)
Best,
Uwe Ligges
Duncan Murdoch
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https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the
posting guide! http
Please,
1. read the posting guide
2. use a sensible subject line
3. this is NOT an r question
4. ask your teacher to explain your homeworks, but not this list
Uwe Ligges
yuying shi wrote:
If there are two random variable X1 and X2 which have
a bivariate normal distribution with mean vector
[EMAIL PROTECTED] wrote:
hello!
My name is Stefanos, from Athens.
I'm a new user of R and I'm studying multivariate time series. I can't find
in the help menu how to calculate the cross spectrum and the coherency of 2
Time Series. Would you like to help me?
See ?spectrum and ?cor
Uwe
Yet another time we shall solve your homeworks?
Please stop sending your homework questions to R-help!
Uwe Ligges
yuying shi wrote:
Dear Sir/Madam,
If I have a sample of observations that come from
an extreme value distribution, the density function
for the extreme value distribution
to the intial period. (i.e the length of the interval betwen 0-1 days
is longer then the interval between 1-2 days and so on) .Hope what i
say above make sense. any advise?
What about applying a logarithm such as in
plot(1:10, log=x)
Uwe Ligges
thanks!
sing yee
to stamp the x
axis.
anyone knows the right way? i've tryed par(cin) and barplot(cin=3) but it
says i cannot do it at this level...
So are we talking about a legend or the axis annotation of a barplot or
what? For the latter, use the argument cex.axis.
Uwe Ligges
thks you all
?
Please read the psoting guide. It points you to the mailing list
archives where this question has been answered hundreds of times.
Uwe Ligges
Thank you in advance!
广星
[EMAIL PROTECTED]
2005-11-23
running my code). Is there an easy way to do that?
Thank you
If the pager is set up appropriately use file.show() or start another
program by a system() call.
Uwe Ligges
The information contained herein
on CRAN. Please tell us which
package you are referring to.
Uwe Ligges
Thanx.
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PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
that facility
been removed?
No, you can use:
R CMD INSTALL --build
Uwe Ligges
Second question: my reading is that .Rbuildignore is only read in the
package root directory, and will have no effect below that. Is that
correct? Per directory .Rbuildignore's would be convenient
...
Uwe Ligges
Any help would be greatly appreciated
Thanks
Lisa
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PLEASE do read the posting guide! http
to modify/fix something, download the source version of a
package, change the code, and INSTALL the source package.
Uwe Ligges
Brian
Brian S. Cade
U. S. Geological Survey
Fort Collins Science Center
2150 Centre Ave., Bldg. C
Fort Collins, CO 80526-8818
email: [EMAIL PROTECTED]
tel
?
The number of columns and rows is not a problem here, but you will need
21682998 * 17 * 4 bytes to store the latter matrix (assuming floats) in
memory, that is 1406.139 Mb.
In order to do something sensible with the data, you need *at least*
twice the amount of RAM, hence at least 3Gb.
Uwe Ligges
Stephen P. Molnar, Ph.D. wrote:
How do I go about autoloading R Commander when I start R?
See ?Startup
Uwe Ligges
Thanks in advance.
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PLEASE do read the posting
?
Please start reading the posting guide and the help files of those
functions.
Without you giving a reproducible example, we cannot help that much.
Uwe Ligges
--- ---
Life is a foreign language; all man mispronouce it.
---Christopher Morley
终于,那野兽倒下了,异教徒们为此而欢庆。 但是
一切并未结束,因为
a subject line on a high traffic mailing list
should be mandatory.
Without you giving a reproducible example, we cannot help that much.
Uwe Ligges
Thank you
Wendy Peng
BC Cancer Agency
Cancer Genetics Department
Co-p Programmer
[[alternative HTML version deleted
,
what about (untested!):
slot(x, slotname)
Best wishes from Dortmund and Lena,
Uwe Ligges
This produced the error message:
In method for function $: expanding the signature to
include omitted arguments in definition: name = missing
Error in rematchDefinition(definition, fdef, mnames, fnames
, what about asking
your lecturer rather than thousands of others?
Uwe Ligges
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PLEASE do read the posting guide! http
not that far away:
?rlnorm
Uwe Ligges
Thank you in advance!
[EMAIL PROTECTED]
2005-11-18
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Jörg Schlingemann wrote:
Hi!
This is probably a very trivial question. Is there an easy way to invert the
y-axis (low values on top) when using the function barplot()?
barplot(1:10, ylim=c(10, 0))
works for me ...
Uwe Ligges
Thanks,
Jörg
[[alternative HTML
-2.2.0?
Well, those in the corresponding 2.2 repository on CRAN should all be
build with R-2.2.0. If not, please tell me which one is wrong.
Where did you get the packages for R-devel from?
Uwe Ligges
What are potential problems that can result from that version mismatch?
My system: winXP
R
to changes in environment handling.
Uwe Ligges
2: package 'modeltools' was built under R version 2.3.0
Error: unable to load R code in package 'modeltools'
Error: package 'modeltools' could not be loaded
Jarek Tuszynski
-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL
(now done for you, see below)
The R Installation and Administration manual has a section on
localization od messages which suggests to use the environment variable
LANGUAGE in order to use another than the default language of your OS
for R messages.
Uwe Ligges
Thanks
Haiyan
=1.2)
medpch issimilar as pch for a plotting character, but not a string.
Hence I'd add the median values by a call to text() as in:
bpo - boxplot(c(x1, x2) ~ label, medcex=1.2)
text(1:2, bpo$stats[3,], median, pos=3)
Uwe Ligges
It only shows the integers at the median position in the boxplots
to CRAN within next week.
Applying your model with fixed versions of your code and R2WinBUGS also
shows that you get some errors in WinBUGS and you have to change your
model file, but that's another issue...
Uwe Ligges
The objective of the program is to compare means of two independent
of
Matrix (which is in the Windows repository again, as mentioned
yesterday) rather than the most recent one.
Exactly the same applies for R-2.1.1, hence no reason to switch back!
Uwe Ligges
Best Wishes,
spencer graves
Duncan Murdoch wrote:
On 11/11/2005 9:13 AM, Liaw, Andy
[Resend the stuff below since initial one has been blocked from R-help.]
I have moved the old Matrix_0.98-7.zip to the main repository for the
meantime.
Best,
Uwe Ligges
Original Message
Subject: Re: [R] no package 'Matrix' at the repositories
Date: Fri, 11 Nov 2005 15:45
.
Uwe Ligges
PS: Let me quote
PLEASE do read the posting guide!
http://www.R-project.org/posting-guide.html
Thanks very much in advance!
David
library(MASS)
jpeg(filename = diswrong.jpg, width = 800, height = 600, pointsize = 12,
quality = 75, bg = white)
myfunc - function(x
? And honestly, I know the answer before
calculating anything
Uwe Ligges
Many thanks in advance.
Kihwang
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PLEASE do read the posting guide! http://www.R
(50,49,57,52,47,52,58,45,55,54,51,54,56,53,52,47,51,54,50,47,46,44,54,55,52,57,52,48,48,51))
dat - format4Bugs(dat, digits = 0)
What happens if you omit the line above?
Anyway, I can take closer look, but not within the next 24 hours ...
Uwe Ligges
parm - c(lbda)
bugs(dat, inits=list
table(X[,drop=TRUE])
Uwe Ligges
Thank a lot,
Bernard
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)
{
...
...
write.table(df,argument.xls)
}
MY.function(argument)
Has been asked hundreds of times on this list. Please check the archives
as the posting guide asks to do ...
Hint: paste()
Uwe Ligges
Thank you
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R-help@stat.math.ethz.ch
is
relevant to get appropriate help. Without giving any examples, we do not
know what does not work for you. If you found a bug in the package,
please report it to the package maintainer.
Uwe Ligges
Thanks for your help.
Yulia
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detaching. I'd suggest not to use attach() at all unless you know what
you are doing and it really improved convenience in interactive analyses.
Uwe Ligges
I searched on masked and read the manual about conflicts but I don't
really understand what the issue is. I didn't get this error message
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