Dr Carbon wrote:
At the risk of being beaten about the face and body, can somebody explain
why the middle example: log2(2^3); floor(log2(2^3)) is different than
examples 1 and 3?
Because
log2(2^3) - 3
[1] -4.440892e-16
see the R FAQ Why doesn't R think these numbers are equal?.
Uwe
Calculations in R. R News 4(1), 17-20,
http://CRAN.R-project.org/doc/Rnews/
Uwe Ligges
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below where the arrangement takes place automatically?
Uwe Ligges
For example, suppose I have to plot the
vertical profile of the aircraft co2
measurement in different months in a year,
and I want to plot these different months in
separate windows but the final 12 plots I
want to keep
the relevant documents, you might want to ask again...
Best,
Uwe Ligges
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nobody
else reported any problems yet...
Thanks.
Hadassa
Please send me your data in a private message. Perhaps we (let me
include Sibylle Sturtz here, since she certainly knows better) find some
time during the next week to look into it.
Uwe Ligges
of the times. In particular, you cannot make a row
from a data.frame to a column generally.
In this case, we just convert the data.frame to matrix. I think most
easily you can write:
dat - t(rbind(meanprofile, sdprofile))
colnames(dat) - c(meanprofile, sdprofile)
Uwe Ligges
Thanks
Fiona Mc Cahey wrote:
Dear all,
I have created a plot like this:
matrix-read.table(G:\\my documents\\names.txt,header=T)
hc-hclust(dist(matrix)^2,cen)
memb-cutree(hc,k=10)
plot(hc,col=black)
What about specifying argument cex?
Uwe Ligges
This prints out a dendrogram with labels
into the ./lib directory.
dyn.load(pack.so,PACKAGE=pack)
argc-2
argv-c(./test,file1)
.C(main,as.integer(argc),as.vector(argv),PACKAGE=pack)
You really want to pass a directory and a filename to your shared
library? So, why are you using R in between?
Uwe Ligges
What am I doing wrong
Dirk Eddelbuettel wrote:
Thomas,
On 30 October 2005 at 17:05, Thomas Herbst wrote:
| Sehr geehrtes R-TEAM!
The list operates in English as a casual look at the archives would have told
you.
| Wie Sie sehen, besteht die Variable worldindex05r aus 3 Spalten V1, V2,
| V3. Rechnen kann R
See ?reshape
Uwe Ligges
Srinivas Iyyer wrote:
Dear Group,
I have a matrix (157 X 157 ) with correlation values.
I want to convert the unique elements into a long list
so that I can add an extra variable and plot them.
Example:
A B C D
alfa 1 0.3 0.8 -0.3
happy to put it into the next release.
-Whit
-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Uwe Ligges
Sent: Thursday, October 27, 2005 4:07 PM
To: Peter Dalgaard
Cc: r-help@stat.math.ethz.ch
Subject: Re: [R] its dates masked by chron
Peter
:
http://www-fis.iarc.fr/~martyn/software/jags/
Uwe Ligges
Jun
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flow ends. How can I ignore
these errors, allowing the program to go on?
Please read the FAQs, in particular How can I capture or ignore errors
in a long simulation?!
Uwe Ligges
Thanks,
Marco
[[alternative HTML version deleted
distance between observations (or
clusters), hence not related to weights of variables.
Uwe Ligges
Thanks
Alessandro
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: the
package currently appears to be more or less unmaintained) to fix this
probably unintended behaviour.
Uwe Ligges
-- Forwarded message --
From: Omar Lakkis [EMAIL PROTECTED]
Date: Oct 27, 2005 11:47 AM
Subject: its dates masked by chron
To: r-help@stat.math.ethz.ch
I built R 2.2.0
will need an almost infinite number of observation to be
sure you did not find anything just by chance ...
Uwe Ligges
Specifically, I am trying to determine what syntax will give stepAIC the
most flexibility to slice and dice my inputs as it searches for the best
possible model.
Any details
and ends but there may be far better approches.
In order to remove *all* blanks, try
gsub( , , a$tic)
Uwe Ligges
Thanks,
Roger
[[alternative HTML version deleted]]
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lines calculating stuff as in f1a
##
## many lines calculating stuff as in f1c
##
}
Uwe Ligges
2005-10-23
--
Deparment of Sociology
Fudan University
My new mail addres is [EMAIL PROTECTED]
Blog:http://sociology.yculblog.com
Googling for gregmisc update points us, e.g., to
http://tolstoy.newcastle.edu.au/~rking/R/devel/05/06/1140.html
Uwe Ligges
Thomas Schönhoff wrote:
Hello,
I notice an odd behavior of gregmisc package when using
update.packages() via R --no-save (as root).
Every time I launch
of CRAN, though.
Uwe Liges
Kjetil
Carlos Regards,
Carlos Mauricio
Carlos Brazil
Regards,
Martin Maechler, ETH Zurich
Carlos Uwe Ligges escreveu:
Carlos Mauricio Cardeal Mendes wrote:
Hi
Does anyone know where is the package: npmc
that... given you have not already found a solution after
reading the guide.
Uwe Ligges
Thanks a lot!
Leaf
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function for 'union' in 'its'
Creating a new generic function for 'intersect' in 'its'
Another issue is that its currently does not pass the CRAN checks
neither for R-release nor R-devel (but looks like it passes for
R-patched since a couple of days now).
Uwe Ligges
10170 NA NA NA NA NA
data[10014,1,1]-count[10014]
works but
data[names(count),1,1]-count[names(count)]
You mean
data[names(count),1,1] - count[names(count)]
without the quotes ...
Uwe Ligges
Fails with Error: indexing outside limits.
Many thanks for any help
you very much for any suggestions.
Without having tested:
with(my.reducedID, rownames(V1==0 V5==14 V6==2))
Uwe Ligges
Best, Muhammad Subianto
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PLEASE do read
can get older versions from the archives, though:
your-CRAN-mirror/src/contrib/Archive/N/npmc_1.0-1.tar.gz
Uwe Ligges
Thanks
Mauricio
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PLEASE do read
to set the max for memory?
Either use memory.limit() in R or start R with, e.g.,
RGui --max-mem-size=1400M
in order to get a max. of 1400Mb of memory...
Uwe Ligges
cheers,
dave
ps - please respond directly to [EMAIL PROTECTED]
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in this context (and is not a waste of bandwidth):
Many thanks to Martin Maechler for managing this list (as well as the
others!) in such a perfect manner and keeping it almost free of spam!
Uwe Ligges
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than from within R with the Syntax (if
called from c:\ and R is in your PATH):
R CMD BATCH whatever.R
Uwe Ligges
paul sorenson
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PLEASE do read the posting
jun xu wrote:
Thanks for all your (ronggui, *Uwe Ligges , **sosman) *help. I got it
through using source. I know R has gone through all those lines, but I
didn't get results of what I would if I use drop-down menu and click run
all under edit after I open a script file? Basically, nothing
or
install.packages(C:/Path/to/Zip/File/Package_Version.zip, repos = NULL)
to install a binary package you already got on your harddisk.
Uwe Ligges
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PLEASE do
():
opar - par(las=1)
plot(1:10)
par(opar)
mtext(Hello, 2)
Uwe Ligges
Jonathan Dushoff
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Arnab mukherji wrote:
Hi!
I was just reading Uwe Ligges write up on extending R-WinEdt for Sweave from
2003; I was wondering if there were updates on it? Are people seriously
thiking about it?
I really use WinEdt a lot, and for not just R, and hence this kind of
extension would
choisir la gauche))
Uwe Ligges
plot(conc, choixg, main =fonction de choix, col= blue, pch=20,
xlab = concentration, ylab=proba de choisir la gauche)
##
Lassana KOITA
Service Technique de l'Aviation Civile (STAC)
Direction Générale
talking about? Do you meant the one from
package nnet in the VR bundle?
- Which version of R and nnet are we talking about?
- What about trying to debug yourself in a first step? E.g. a
traceback() might give you (and us) some first hints what is going on.
Uwe Ligges
Thanks,
Weiwei
,max=1.2)
eee=ceiling(ee-1)
x=matrix(data=c(ccc,ddd,eee),nrow=1500)
image(x)
points(seq(0,1,1/(1500-1)),(ccc)^-1*0, pch=.)
points(seq(0,1,1/(1500-1)),(ddd)^-1*0.5, pch=.)
points(seq(0,1,1/(1500-1)),(eee)^-1*1, pch=.)
dev.off()
and zoom in now
Uwe Ligges
Gareth Davies wrote
, AthlonXP,
Athlon64 (32-bit), you are welocme to contribute, of course.
Uwe Ligges
Thank you,
Bing Ho
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)
The slope estimate is still valid while your intercept can be calculated
afterwards.
Uwe Ligges
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PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
R itself cannot calculate symbolically (which is what you want to do it
in this case, I guess), just numerically.
Uwe Ligges
by moving as much as possible out of your loop by
doing it in a vectorized way (I don't know all the functions you are
using, hence cannot make any further recommendations).
Uwe Ligges
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Clark Allan wrote:
hi all
an integration problem. i would like an exact or good approximation for
the following, but i do not want to use a computer. any suggestions:
integral of exp(b*x)/sqrt(1-x^2)
Sounds like the problem of integrating the Gaussian density...
Uwe Ligges
where
to specify a minimal toy
example that shows your problem.
Uwe Ligges
Thanks
Iain
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[EMAIL PROTECTED] wrote:
Uwe Ligges a écrit :
[EMAIL PROTECTED] wrote:
Domenico Cozzetto a écrit :
Dear all,
I'd like to get a linear regression of some data, and impose that
the line
goes through a given point P. I've tried to use the lm() method in the
package stats, but I wasn't
=1.3, xaxt=n, yaxt=n)
3. As I have already guessed, the axis annotation of the tick at
position 1 is left out because R thinks there is not enough space left.
You can workaround this point by making the label appear separately as in:
axis(side=1, at=c(0,3,5,7,10,14,21))
axis(1, 1)
Uwe Ligges
have full write access?
The 00LOCK directory is used to save the older package in order to be
able to restore it if a new installtion fails.
Something went wrong and you have to remove it manually now, I guess.
Uwe Ligges
Thanks.
Claire
__
R
to install from some *other arbitrary* source directory *into*
the library mentioned above.
Uwe Ligges
$ R CMD check bbHist
* checking for working latex ... OK
* using log directory
'c:/progra~1/r/rw2011/library/bbHist.Rcheck'
* using R version 2.1.1, 2005-06-20
* checking for file 'bbHist
.
It is almost impossible to help if you do not specify a toy example that
shows how you produced that error message.
Please read the psoting guide which tells you how to specify such
examples most appropriately in order to get a good answer.
Uwe Ligges
The error message:
Error in data.frame(object
= 18, main = 'Uniform Data')
## plot the mean:
points(mean(x), col = red)
Uwe Ligges
Thanks in advance...
- Jason
Jason Horn
Boston University Department of Biology
5 Cumington Street Boston, MA 02215
[EMAIL PROTECTED]
office: 617 353 6987
cell: 401 588 2766
it, and give an appropriate error
message if splines is required but not available for the case in question.
Uwe Ligges
Best regards
Frede Aakmann Tøgersen
-Oprindelig meddelelse-
Fra: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] På vegne af lforzani
Sendt: 3. oktober
}
\dontrun{
num_reps - readline(How many reps do you have... )
Here is a syntax error, obviously (hint: )
Uwe Ligges
num_reps - as.integer(num_reps)
}
could this have anything to do with it running on OS X 10.3 ?? (long
shot...but i'm thoroughly lost)..
thanks again,
ken
From
@stat.math.ethz.ch mailing list
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PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
Yes, please do so.
Uwe Ligges
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Lisa Wang wrote:
Hello,
I have a list lis as the following:
$1
x1 x2
4 3 1
$2
x1 x2
3 3 2
5 3 2
$3
x1 x2
2 3 3
6 3 3
How do I get the x1 varible? for example ss1
I can only guess you mean something like
lis[[1]][[x1]]
Uwe Ligges
(cited at the bottom of the mail) which
gives advice how to formulate questions properly.
Best,
Uwe Ligges
Thanks a lot
patientstime pressure
1 1 24
1 2 34
2 2 45
2 2.550
2 1.530
3 8
(s3d_coords, col = i, border = black)
}
Uwe Ligges
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development seem to be more appropriate for the
R-devel list.
[Please move it there for follow-ups.]
Uwe Ligges
This package requires a Makefile. My question is, how can I find out
(or what is), the link command?
Here is the OS X Makefile:
RLIB_LOC=${R_HOME}
F90_FILES
Louis Ferre wrote:
Hi,
what is the name of the package that provides Random Forest with R.
Really, what about looking yourself on CRAN or just googling for it?
Most surprisingly the name of the package is randomForest.
Uwe Ligges
Sincerely
Louis Ferré
http://www.univ-tlse2.fr/grimm/smash
=19,col=blue,cex=5)
Am I misunderstanding the bg option in the points function?
Richard
Please read ?points and it's paragraph on te argument pch with quite
some information regarding filled symbols...
Uwe Ligges
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on where the makefile is or why it's not there?
Probably because of errors during ./configure ... and we do not know
which errors came up ...
Uwe Ligges
Keith
.
[[alternative HTML version deleted]]
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. In order not
to repeat the inits 7 times, you might want to specify them simply as a
function such as:
inits - function(){
list(tau = rep(1, 17), C0 = 5, st90 = 4, C0.pop = 5, st90.pop = 4,
tau.cpop = 0.2, tau.stpop = 1)
}
Uwe Ligges
[Further correspondence on this particular topic
failed in 'attachNamespace'
Error: package/namespace load failed for 'RWinEdt'
Please re-install and load RWinEdt as follows:
install.packages(RWinEdt)
library(RWinEdt)
It works for me with a recent R-2.2.0 alpha.
Uwe Ligges
version
_
platform i386-pc-mingw32
package descriptions
library(RWinEdt)
Error in getWinEdt() :
WinEdt is not installed properly.
So, what version of WinEdt are you using, where is it installed and what
are the corresponding registry entries?
Uwe Ligges
Either reinstall WinEdt or install R-WinEdt manually as described
. Recommendations on
other methods are appreciated as well.
There were some discussions on this topic during the last year. Please
check the mailing list archives.
Uwe Ligges
Hao
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Robin Hankin wrote:
Hi
If I do this:
par(mfrow=c(2,2))
Insert:
par(mar=rep(0,4))
Uwe Ligges
persp(matrix(1:4,6,6),box=F,phi=33,theta=33)
persp(matrix(1:4,6,6),box=F,phi=33,theta=33)
persp(matrix(1:4,6,6),box=F,phi=33,theta=33)
persp(matrix(1:4,6,6),box=F,phi=33,theta=33
for filtering are neither in sound nor in tuneR
(yet). Contributions are welcome, of course!
Uwe Ligges
might have exactly what you want. A book on time series or signal processing
might be helpful.
Reid Huntsinger
-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED
as NA.
The following does not work either:
factor(x,exclude=factor(c,levels=c(a,b,c)))
[1] a b c
Levels: a b c
What's wrong with my codes?
factor(x, levels=letters[1:2])
Uwe Ligges
Thanks for any help
Qiong Yang
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and the devices are generally not
designed to display movies.
Also drawing of a plot might take a considerable amount of time.
Uwe Ligges
thanks in advance
Johan VH
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anything
specifically on this.
Not directly, but you can fake by plotting the stuff in two chunks as in:
plot(1:12, xaxt=n)
months - c(J,F,M,A,M,J,J,A,S,O,N,D)
temp - seq(1, 12, 2)
axis(1, temp, labels=months[temp])
temp - seq(2, 12, 2)
axis(1, temp, labels=months[temp])
Uwe Ligges
cheers
question: This is the FAQ How can I turn a
string into a variable?. The posting guide asks you to read these FAQs
before sending questions to R-help. Please do so.
Uwe Ligges
matrix(LETTERS[1:16], ncol=4) - MM
MM
[,1] [,2] [,3] [,4]
[1,] A E I M
[2,] B F J N
[3,] C G K O
John Charles Considine wrote:
On Mon, 2005-09-19 at 11:38 +0200, Uwe Ligges wrote:
[EMAIL PROTECTED] wrote:
I am trying to extract data from a matrix. Let's say that i am interested in
extracting
rows from a 4x4 matrix. Instead of giving a fix name to these 4 rows I would
like to add
nightmares. ;-)
Uwe Ligges
Thanks,
Roland
+
This mail has been sent through the MPI for Demographic Rese...{{dropped}}
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PLEASE do read the posting
, it was not possible to retain the API (i.e.
names of functions, argument ordering and expected objects) of package
sound.
Uwe Ligges
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)
})
Uwe Ligges
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Sebastian Leuzinger wrote:
Hello, has anybody got a simple recepie to test the significance level of the
peaks after using spectrum() ?
What is you null hypothesis?
- Kind of noise?
- One particular frequency is noisy or all noisy?
- ...
Uwe Ligges
(R-version 2.0.1, linux SuSE9.3
non-white-noisy frequency.
[If somebody knows a really good book or papers that cover other cases
than the trivial one mentioned above, I am very interested to hear about
them, BTW.]
If you have another kind of noise (such as blue or pink noise), things
become even worse.
Uwe Ligges
if we
have a larger dataframe?
we need to construct some kind of row indicator telling R which rows
contains NA'S.
is there an easier method?
na.omit(a)
Uwe Ligges
/
allan
Martin Lam wrote:
Hi,
I was wondering if someone know how to sort a data set
by column.
I've tried sort() but without luck. I would think
there should be a function for it somewhere. An
example with the iris data set would be appreciated.
See ?order.
Uwe Ligges
Thanks,
Martin
v1 v2 v3
[1,] 1 4 7
[2,] 2 5 8
[3,] 3 6 9
[4,] 10 11 12
ind
[1] 2 4
I would like to obtain this:
m2
v1 v2 v3
[1,] 1 4 7
[3,] 3 6 9
by saying something like
m2-m[!=(ind),]
See help([) and learn about negative indices:
m2 - m[-ind,]
Uwe Ligges
but this line
Karsten Luder wrote:
Hello,
I have two vectors of different lengths. Fx a - 1:9; b - c(4, 5).
What is the best way to remove the elements in vector b from vector a so
that the result would be a vector with elements c(1,2,3,6,7,8,9)?
setdiff(a, b)
Uwe Ligges
Best regards,
Kalle
?seq
Uwe Ligges
Thanks
tom
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* included in *package* eda.
Uwe Ligges
Thanks.
Stephen.
- Original Message -
From: Luis Ridao Cruz [EMAIL PROTECTED]
Date: Tuesday, September 13, 2005 1:32 pm
Subject: Re: [R] How to erase objects
?rm
[EMAIL PROTECTED] 13/09/2005 12:08:55
Hi, I admit that I rather
follow Andy and use .Platform, and in particular nothing
else for programming!
It is *not* guaranteed that on Windows version$os == mingw32.
Uwe Ligges
Andy
HTH,
--sundar
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Jan-Paul Roodbol wrote:
Does anyone know if randomForest in R can handle
dataset with missings?
See ?randomForest, you can omit observations including NAs by specifying
na.action=na.omit
Please do not cross-post!
Please specify a sensible subject!
Uwe Ligges
Thank you
Kind regards
it working.
See ?sink how to handle messages such as warnings.
Uwe Ligges
Thanks in advance, Alex
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Gallagher Dionysus Polyn wrote:
I'm next at installing packages. I seem to have successfully installed
evir, but I can't use it. I'm wondering if I need to specify the
installation to match my working directory, or something else.
Load the package at first:
library(evir)
Uwe Ligges
thx
James Wettenhall wrote:
Hi,
I'm trying to debug an R interface to a Fortran subroutine from Windows.
(Yes, I know I should try Unix/Linux as well, but a quick attempt
suggested that the (MinGW g77) Fortran compiler I have installed on my
Windows laptop works better on this Fortran code.)
...
For further report, please set
LANGUAGE=en
before a sample-run you want to include in a question to R-help, because
not everybody understands italian.
Uwe Ligges
Thanks a lot,
best,
Sonia
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much space or some special characters in your
variables that cause problems when printing ...
Hence you have to debug your data yourself.
Uwe Ligges
Does anyone know what is going on?
Tusen tak in advance, in fact 1254 tak in advance!
Murray Jorgensen
(function(x)
abs(strwidth(Hello World, cex=x)-8),
interval=c(1, 10))$minimum
text(5,5, Hello World, cex=cex)
Uwe Ligges
=
Salang
[EMAIL PROTECTED]
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Shanghai
of R and try again.
Uwe Ligges
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to say
./configure
make
make install
is it?
Looks like you have to look for some other software than R.
Uwe Ligges
b) You do NOT want to do numerical computations on software available in
Java byte code.
You do not want to do heavy numerical computations with R either. Most
://stat.bell-labs.com/RS-DBI/download/index.html
for the binary package provided by David James and read the comments.
Uwe Ligges
L. Tessier
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://www.R-project.org/posting-guide.html
Yes, PLEASE do read the posting guide!
http://www.R-project.org/posting-guide.html
Uwe Ligges
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-only when executed?
So you want to modify a file *while* it is executed?
Sounds dangerous to me, you may want to explain further...
BTW: Which OS are we talking about?
Uwe Ligges
Best regards
Vidar
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like using CPU optimized
linear algebra systems such as ATLAS or Goto's BLAS.
Uwe Ligges
Many thanks, Peter
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!
The *value* is either NULL *or* a vector of mode integer.
It is always NULL for any vector without dim attribute (also for
character vectors!):
x - a
dim(x) # NULL
dim(x) - 1
dim(x) # 1
Uwe Ligges
Uwe Ligges wrote:
Christian Prinoth wrote:
Hi, if I do
Z-rnorm(50)
Followed
) modules. R will be more useful if it is not only a language
There are some packages availabe with tools for DOE, please check CRAN.
Further contributions from users who like to do DOE (like you!) are
welocme, of course!
Uwe Ligges
and environment for statistical computing and graphics
is true, but less general than
It is NULL or a vector of mode integer.
hence the latter is surely preferred.
Z, in fact, it is not true:
x - integer(1)
dim(x) - 1
typeof(x) # integer
dim(x)# 1
Best,
Uwe
Z
NOTE: for not or in the second sentence.
Uwe Ligges wrote:
Christian
to fix their packages.
Uwe Ligges
Cheers,
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0.0 0.0
ci.h
[1] 633.50323 426.10093 45.12493 344.85453 196.19980 198.17632 208.96365
[8] 76.49691 0.0 0.0
xrow
[1] 468.8 314.3 20.1 204.0 96.0 96.0 115.0 36.0 0.0 0.0
barplot2(xrow,plot.ci=TRUE,ci.l=ci.l,ci.h=ci.h)
It is called ci.u, not ci.h!
Uwe Ligges
[EMAIL PROTECTED] wrote:
hy all,
When i plot under R it generates a 440x440px image, is it possible to modify
and increase this ?
What device are we talking about?
See the corresponding help file, maybe starting at ?Devices
Uwe Ligges
thks all
guillaume
() and
specify the line where to add the text as in:
par(mar = c(1, 4, 0, 0) + 0.1)
plot(c(1,2,2,3,3,3), type=p, pch=20, ylab=Y Label,
xlab=, xaxt=n)
title(xlab=X Label, line=0)
Uwe Ligges
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