[R] modifications to text.tree function

2005-05-12 Thread Alexander Sirotkin
, but could not - the original function uses some undocumented treeco function, which I can not find. Any ideas ? Thanks. -- Alexander Sirotkin __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read

[R] question about plot.acf

2005-03-31 Thread Alexander Sirotkin
Hi. I'm looking for a way to plot autocorrelation, but in a little bit different way than plot.acf does. Instead of plotting NxN graphs (assuming N is ht enumber of variables) like plot.acf does, I'd like to have one graph of sum of all autocorrelations vs. lag. Is there any function that

RE: [R] statistical significance test for cluster agreement

2004-03-24 Thread Alexander Sirotkin \[at Yahoo\]
with clustering? Just my $0.02... Andy From: Alexander Sirotkin [at Yahoo] I was wondering, whether there is a way to have statistical significance test for cluster agreement. I know that I can use classAgreement() function to get Rand index, which will give me some indication whether

RE: [R] statistical significance test for cluster agreement

2004-03-24 Thread Alexander Sirotkin \[at Yahoo\]
Christian, I think I understand your point, but I do not completely agree with you. I also did not describe my problem clear enough. If you see two clusterings on the same data, they are identical, if they are 100% identical, and if not, then not. What you are actually saying is that all

[R] statistical significance test for cluster agreement

2004-03-23 Thread Alexander Sirotkin \[at Yahoo\]
I was wondering, whether there is a way to have statistical significance test for cluster agreement. I know that I can use classAgreement() function to get Rand index, which will give me some indication whether the clusters agree or not, but it would be interesting to have a formal test. Thanks.

RE: [R] importing S-Plus data files

2004-02-27 Thread Alexander Sirotkin \[at Yahoo\]
S-Plus version is 6.1 (on both Linux and Windows), R is 1.8.1. It's Win2K, although I don't think it matters. Thanks. --- Liaw, Andy [EMAIL PROTECTED] wrote: You can help yourself to help us by at least telling us what versions of S-PLUS on Linux the data were created from, the version of

[R] problem with bagging

2004-02-06 Thread Alexander Sirotkin \[at Yahoo\]
I'm having the most weird problem with bagging function. For some unknown reason it does not improve the classification (compared to rpart), but instead gives much worse results ! Running rpart on my data gives error rate of about 0.3 and bagging, instead of improving this results, gives error

Re: [R] Difference between summary.lm() and summary.aov()

2003-12-16 Thread Alexander Sirotkin \[at Yahoo\]
models, correct me if I'm wrong. It is unclear to me, however, how it manages to do this F-test for interactions ? Thanks a lot. --- Peter Dalgaard [EMAIL PROTECTED] wrote: Alexander Sirotkin [at Yahoo] [EMAIL PROTECTED] writes: John, What you are saying is that any conclusion I can make

Re: [R] Difference between summary.lm() and summary.aov()

2003-12-07 Thread Alexander Sirotkin \[at Yahoo\]
here.) Regards, John At 09:17 AM 12/6/2003 -0800, Spencer Graves wrote: The square of a Student's t with df degrees of freedom is an F distribution with 1 and df degrees of freedom. hope this helps. spencer graves Alexander Sirotkin [at Yahoo] wrote: I have

[R] Difference between summary.lm() and summary.aov()

2003-12-06 Thread Alexander Sirotkin \[at Yahoo\]
I have a simple linear model (fitted with lm()) with 2 independant variables : one categorical and one integer. When I run summary.lm() on this model, I get a standard linear regression summary (in which one categorical variable has to be converted into many indicator variables) which looks like

Re: [R] R memory and CPU requirements

2003-10-17 Thread Alexander Sirotkin \[at Yahoo\]
lot of sense. I hope that this helps, John At 05:03 PM 10/16/2003 -0700, Alexander Sirotkin \[at Yahoo\] wrote: --- Deepayan Sarkar [EMAIL PROTECTED] wrote: On Thursday 16 October 2003 17:59, Alexander Sirotkin \[at Yahoo\] wrote: Thanks for all the help on my previous

Re: [R] R memory and CPU requirements

2003-10-17 Thread Alexander Sirotkin \[at Yahoo\]
--- Deepayan Sarkar [EMAIL PROTECTED] wrote: On Thursday 16 October 2003 19:03, Alexander Sirotkin \[at Yahoo\] wrote: Thanks for all the help on my previous questions. One more (hopefully last one) : I've been very surprised when I tried to fit a model (using aov

Re: [R] R memory and CPU requirements

2003-10-17 Thread Alexander Sirotkin \[at Yahoo\]
Alexander, At 01:29 AM 10/17/2003 -0700, Alexander Sirotkin \[at Yahoo\] wrote: I agree completely. In fact, I have about 5000 observations, which should be enough. I was using 200 samples because of RAM limitations and I'm afraid to think about what amount of RAM I'll need to fit

Re: [R] R memory and CPU requirements

2003-10-16 Thread Alexander Sirotkin \[at Yahoo\]
--- Deepayan Sarkar [EMAIL PROTECTED] wrote: On Thursday 16 October 2003 17:59, Alexander Sirotkin \[at Yahoo\] wrote: Thanks for all the help on my previous questions. One more (hopefully last one) : I've been very surprised when I tried to fit a model (using aov()) for a sample

[R] aov and non-categorical variables

2003-10-15 Thread Alexander Sirotkin \[at Yahoo\]
It is unclear to me how aov() handles non-categorical variables. I mean it works and produces results that I would expect, but I was under impression that ANOVA is only defined for categorical variables. In addition, help(aov) says that it call to 'lm' for each stratum, which I presume means

Re: [R] aov and non-categorical variables

2003-10-15 Thread Alexander Sirotkin \[at Yahoo\]
() I tried to find some explaination about it in R manuals, and did not find any. Do you know where the meaning of Error() in aov() is documented ? Thanks. --- [EMAIL PROTECTED] wrote: On 15 Oct 2003 at 9:32, Alexander Sirotkin [at Yahoo] wrote: It is unclear to me how aov() handles non