Re: [R] Hershey fonts for musical notation?
Hi, Atte De : [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] De la part de Atte Tenkanen Envoyé : mercredi 3 janvier 2007 09:17 Hi, I'd like to know if it is possible to use Hershey vector fonts to create very primitive musical notation. [...] There is an example of a music score produced with R and the Hershey fonts in the book 'R Graphics', by Paul Murrell (Chapman Hall/CRC, 2005), page 15. The R Code is on the web page for the book: http://www.stat.auckland.ac.nz/~paul/RGraphics/examples-stevemiller.R BTW, I do a lot of things with R but for music scores I use the ABC language (http://www.walshaw.plus.com/abc/). You can output PostScript from it with Jef Moine's abcm2ps (http://moinejf.free.fr/). Happy new year! Christophe -- Christophe Declercq, MD Observatoire régional de la santé Nord-Pas-de-Calais 235, avenue de la recherche BP 86 F-59373 LOOS CEDEX Phone +33 3 20 15 49 24 Fax + 33 3 20 15 10 46 E-mail [EMAIL PROTECTED] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] quantile() with weights
De : [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] De la part de Wouter Envoyé : vendredi 9 juin 2006 19:15 Hi list, I'm looking for a way to calculate quantiles (such as in quantile()), but with the ability to assign a different weight to each member of the sample vector. [...] See 'wtd.quantile' in the 'Hmisc' package. Christophe -- Christophe Declercq, MD Observatoire régional de la santé Nord-Pas-de-Calais 235, avenue de la recherche BP 86 F-59373 LOOS CEDEX Phone +33 3 20 15 49 24 Fax + 33 3 20 15 10 46 E-mail [EMAIL PROTECTED] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
Re: [R] measurement unit
Adrian, -Message d'origine- De : [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] la part de Adrian DUSA Envoye : vendredi 9 septembre 2005 09:54 Dear R-list, Could anybody tell me where to find information about changing the measurement unit from inch to centimeters? I read the help from X11, I read R-intro and I did some searhing in the R archives, but I couldn't find the answer. For example, I would like to produce a plot of a certain width and height: X11(width=10, height=5) and I would like these to be centimeters, rather than inches. Thank you, Adrian 1 inch = 2.54 cm So you could try what I do for that X11(width=10/2.54, height=5/2.54) Or cm2in-function(x) x/2.54 X11(width=cm2in(10), height=cm2in(5)) HTH Christophe -- Christophe Declercq, MD Observatoire regional de la sante Nord-Pas-de-Calais 13, rue Faidherbe F-59046 LILLE Cedex Phone 33 3 20 15 49 24 Fax 33 3 20 55 92 30 E-mail [EMAIL PROTECTED] -- Adrian Dusa Romanian Social Data Archive 1, Schitu Magureanu Bd 050025 Bucharest Romania Tel./Fax: +40 21 3126618 \ +40 21 3120210 / int.101 __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
RE: [R] Decimal point as a comma in postcript and pdf graphics
De : [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] la part de Peter Dalgaard Envoye : mercredi 9 mars 2005 15:19 Ronny Klein [EMAIL PROTECTED] writes: [...] I would like to have a comma instead of a point as the decimal point in my graphics, i.e. postscript and pdf files, for I write my thesis in German. My [...] We don't have a way of formatting numbers according to LC_NUMERIC, as far as I know. This leaves it to you to set up axes etc. to your liking, e.g. x - rnorm(100,,.2) p - pretty(x) hist(x,xaxt=n) axis(1, at=p, labels=sub(\\., ,, p)) (and possibly throw in xlim=range(p) on the hist() call. Or use axTicks(), which is probably a better idea.) When I need that, I use something like Peter but with the 'format' function, for example: x - rnorm(100,,.2) p - pretty(x) hist(x,xaxt=n) axis(1, at=p, labels=format(pretty(x), decimal.mark=,)) Hope it helps. Christophe -- Christophe Declercq, MD Observatoire regional de la sante Nord-Pas-de-Calais 13, rue Faidherbe F-59046 LILLE Cedex Phone 33 3 20 15 49 24 Fax 33 3 20 55 92 30 E-mail [EMAIL PROTECTED] Ronny PS: The problem of displaying the German umlauts, I have already solved: I have to use the WinAnsi.enc as the default encoding file. Which is odd in my opinion. This should improve in 2.1.0 (or at least be broken in new and interesting ways) due to support for UTF-8 encodings. -- O__ Peter Dalgaard Blegdamsvej 3 c/ /'_ --- Dept. of Biostatistics 2200 Cph. N (*) \(*) -- University of Copenhagen Denmark Ph: (+45) 35327918 ~~ - ([EMAIL PROTECTED]) FAX: (+45) 35327907 __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
RE: [R] how to produce disease maps
Oarabile == Oarabile Ruth Molaodi [EMAIL PROTECTED] on Thu, 24 Feb 2005 17:06:40 + writes: Oarabile how to do disease maps in R? I want to produce Oarabile disease maps (A map which shows distribution of a Oarabile disease in areas of a city , country e.t.c) for Oarabile the spatial geographical data I have and I'm Oarabile wondering if this can be done in R. I realise that Oarabile there is maps package ,mapdata and e.tc. but these Oarabile do not show how. Please study the two vignettes in the 'spdep' package. They should put you on the right track. Christophe -- Christophe Declercq, MD Observatoire regional de la sante Nord-Pas-de-Calais 13, rue Faidherbe F-59046 LILLE Cedex Phone 33 3 20 15 49 24 Fax 33 3 20 55 92 30 E-mail [EMAIL PROTECTED] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
RE: [R] Using sweave
De : [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] la part de
Matthieu Cornec
Envoye : vendredi 18 fevrier 2005 17:40
hello,
Suppose in Rnw file, I compute a numeric of name x
containing the value 1.
In my tex file, I want to write
Let x= the real value of x
so that I can see in my dvi file : Let x = 1,
with 1, the actual value of x written in a math
environnement for example.
Try the \Sexpr{} command in LaTeX (see the Sweave manual). It's OK for
a scalar.
For example, something like this in the body of your LaTeX file should
do what you want:
=
x-1
@
Let $x=\Sexpr{x}$
Christophe
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RE: [R] S latex listings
De : [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] la part de Josep Perarnau Envoye : mardi 28 septembre 2004 10:38 A : [EMAIL PROTECTED] Objet : [R] S latex listings Hello, I would like to insert S code to my latex document. I was looking for a listings package that supports S. In www.r-project.or in the software/other section there is an item with a link to latex package listings, but it seems that the link is broken. Does anybody know an alternative to get the package? [...] Try the TeX catalogue online: http://www.tug.org/tex-archive/help/Catalogue/brief.html You will find that you can get the 'listings' package at: http://www.tug.org/tex-archive/macros/latex/contrib/listings/ Christophe -- Christophe Declercq, MD Observatoire regional de la sante Nord-Pas-de-Calais 13, rue Faidherbe F-59046 LILLE Cedex Phone 33 3 20 15 49 24 Fax 33 3 20 55 92 30 E-mail [EMAIL PROTECTED] __ [EMAIL PROTECTED] mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
Re: [R] Hawaii in map() function
From: Michelle Bell [EMAIL PROTECTED] To: [EMAIL PROTECTED] Sent: Sunday, September 05, 2004 9:08 PM Subject: [R] Hawaii in map() function I would like to use the map function for the continental US plus Hawaii, but can only find the library files for the continental US. Suggestions? You can find Hawaii in the world map database You could try: library(map) map(world, c(USA, Hawaii)) which has perhaps more than what you want, or try something like: map(usa, xlim=c(-170,-60), ylim=c(15,55)) map(world, Hawaii, add=TRUE) Christophe __ [EMAIL PROTECTED] mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
Re: [R] image() with color key?
Hi, Michael Did you try 'image.plot' in the 'fields' package? Christophe - Original Message - From: Michael Jerosch-Herold [EMAIL PROTECTED] To: [EMAIL PROTECTED] Sent: Friday, September 03, 2004 9:42 PM Subject: [R] image() with color key? Is there an easy way to plot a color key next to a color image (with image() in graphics package)? The color key should also include a numerical scale, so that the colors can be cross-referenced with image intensity values. I see that levelplot has a facility for color keys, but with image it seems less straightforward, i.e. generating a color key is not an option in image(). Thank you! Michael Jerosch-Herold __ [EMAIL PROTECTED] mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html __ [EMAIL PROTECTED] mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
RE: [R] Problem with par(usr)
Bonjour, Nicolas
par('usr') is read-only (see '?par')
That makes sense: user coordinates come from what you have plotted.
Would you show us an example of what exactly you want to do?
Christophe
--
Christophe Declercq, MD
Observatoire régional de la santé Nord-Pas-de-Calais
13, rue Faidherbe
F-59046 LILLE Cédex
Phone 33 3 20 15 49 24
Fax 33 3 20 55 92 30
E-mail [EMAIL PROTECTED]
-Message d'origine-
De : [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] la part de Nicolas STRANSKY
Envoyé : jeudi 3 juin 2004 11:36
À : [EMAIL PROTECTED]
Objet : [R] Problem with par(usr)
Hi,
I'm trying to use the usr argument but I see no effect of this option
on my plots. For example:
par(usr=c(0,4,0,4))
plot(1,1)
This plots one point fine, but the coordinates of the plotting region
are not those that I specified using par()...
I can check this with
par(usr)
[1] 0.568 1.432 0.568 1.432
What can I change in order to have this usr argument working ?
The aim of all this is to be able to superpose two plots where xlim and
ylim arguments are not sufficient for having the same scalings...
Thanks for your help.
--
Nicolas STRANSKY
Équipe Oncologie Moléculaire
Institut Curie - UMR 144 - CNRS Tel : +33 1 42 34 63 40
26, rue d'Ulm - 75248 Paris Cedex 5 - FRANCEFax : +33 1 42 34 63 49
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RE: [R] Isotopic notation in plots
Try:
plot(1:10,xlab=expression(phantom(0)^{14}*C))
Christophe
--
Christophe Declercq, MD
Observatoire regional de la sante Nord-Pas-de-Calais
13, rue Faidherbe
F-59046 LILLE Cedex
Phone 33 3 20 15 49 24
Fax 33 3 20 55 92 30
E-mail [EMAIL PROTECTED]
-Message d'origine-
De : [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] la part de Andersson, Henrik
Envoye : mardi 18 mai 2004 11:00
A : [EMAIL PROTECTED]
Objet : [R] Isotopic notation in plots
I really like to use R for all my graphs, and as I work with stable
isotopes I want to have a proper chemical notation in my plots
I have looked at ?plotmath, but didn't find the answer and also searched
the R website.
--
plot(1:10,xlab=expression(^{14}*C)) # I want to have a superscript with
nothing in front, but it doesn't work
plot(1:10,xlab=expresssion(.^{14}*C)) # this works, but is not
beautiful
Any ideas ?
-
Henrik Andersson
Netherlands Institute of Ecology -
Centre for Estuarine and Marine Ecology
P.O. Box 140
4400 AC Yerseke
Phone: +31 113 577473
[EMAIL PROTECTED]
http://www.nioo.knaw.nl/ppages/handersson
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RE: [R] years from as.POSIXlt
As I understand it, there is perhaps something bad with 1970-01-01 00:00, not in R, but in (at least some versions of) MS-Windows (e.g. http://finzi.psych.upenn.edu/R/Rhelp02a/archive/26357.html). version _ platform i386-pc-mingw32 arch i386 os mingw32 system i386, mingw32 status major1 minor8.1 year 2003 month11 day 21 language R Sys.info()[c(1:3,5)] sysname release Windows NT 5.1 version machine (build 2600) Service Pack 1 x86 Sys.getlocale(LC_TIME) [1] French_France.1252 as.POSIXct(1970-01-01 01:00:00) [1] 1970-01-01 01:00:00 Paris, Madrid as.POSIXct(1970-01-01 00:00:00) Error in fromchar(x) : character string is not in a standard unambiguous format julian(.leap.seconds) Error in fromchar(x) : character string is not in a standard unambiguous format but, of course, 'julian' is OK with another origin julian(.leap.seconds, origin=ISOdate(1900,1,1)) Time differences of 26478.5, 26662.5, 27027.5, 27392 [truncated] Christophe -- Christophe Declercq, MD Observatoire regional de la sante Nord-Pas-de-Calais 13, rue Faidherbe F-59046 LILLE Cedex Phone 33 3 20 15 49 24 Fax 33 3 20 55 92 30 E-mail [EMAIL PROTECTED] -Message d'origine- De : [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] la part de Prof Brian Ripley Envoye : mercredi 10 mars 2004 08:22 A : Thomas Petzoldt Cc : [EMAIL PROTECTED] Objet : Re: [R] years from as.POSIXlt On Wed, 10 Mar 2004, Thomas Petzoldt wrote: (without copying me) Prof Brian Ripley wrote: See ?julian, which says Note: Other components such as the day of the month or the year are very easy to computes: just use 'as.POSIXlt' and extract the relevant component. Hello, unfortunately not all mentioned functions work on all machines. Where No function is mentioned in that note! months(.leap.seconds) works on all systems, a call to julian(leap.seconds) What is `leap.seconds'? julian(.leap.seconds) works on Windows XP, of course. workes perfectly only on Linux (R 1.8.0) but failed on two different XP Machines (German XP version): Error in fromchar(x) : character string is not in a standard unambiguous format What is `leap.seconds' on your machine? It is an object that as.POSIXct is failing on, I suspect (try traceback() to be sure). I've tested several things, several versions of msvcrt.dll, different PATH settings, locale set to German or USA, R 1.8.1 and R 1.7.1, but the problem remains. On the other hand as.numeric(format(x, f=%d)) works perfectly, so I do not understand what is wrong with julian() Do *read* the advice on how to get yday quoted above. -- Brian D. Ripley, [EMAIL PROTECTED] Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ University of Oxford, Tel: +44 1865 272861 (self) 1 South Parks Road, +44 1865 272866 (PA) Oxford OX1 3TG, UKFax: +44 1865 272595 __ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html __ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
Re: [R] adjacency matrix
- Original Message -
From: Orlando Zacarias [EMAIL PROTECTED]
To: [EMAIL PROTECTED]
Cc: [EMAIL PROTECTED]; [EMAIL PROTECTED]
Sent: Thursday, October 23, 2003 6:56 PM
Subject: RE: [R] adjacency matrix
Hi once again,
Now i have been trying to run the R changed example from Maptools
package manual, and errors occur underlined bellow. It is really
troublesome
Please assist,
Orlando.
---
shp - try(library(shapefiles))
Error in library(maptools) : There is no package called 'shapefiles'
The message is clear!
if (class(shp) != try-error) {
+ ShapeDir - system.file(shapes, package=maptools)[1]
+ try1 - read.shapefile(paste(ShapeDir, shapes, sep=/))
+ shppolys - shape2poly(try1, as.character(try1$dbf$dbf$NEIGNO))
+ plotpolys(shppolys)
+ title(main=Polygons for Vermani from shapefiles package)
+ }
try2 - read.shape(system.file(shapes/Vermani.shp,
+ package=maptools/man)[1])
Error: couldn't find function read.shape
mappolys - Map2poly(try2, as.character(try2$att.data$NEIGNO))
Error: couldn't find function Map2poly
plotpolys(mappolys)
Error: couldn't find function plotpolys
title(main=Polygons for Vermani from maptools package)
Error in title(main = Polygons for Vermani from maptools package) :
plot.new has not been called yet
if (class(shp) != try-error) {
+ plotpolys(shppolys)
+ plotpolys(mappolys, add=TRUE, border=red, lty=dotted)
+ title(main=Polygons for Vermani overplotted from both packages)
+ }
--
Did you forget:
library(maptools)
before that?
Christophe
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RE: [R] adjacency matrix
Your question is not really clear because: - I don't know what 'convert.r' do - I don't know where 'transf.cgm' is (BTW, 'cgm' is not the usual extension for shapefiles which is 'shp'). Check if it is really in your current directory. but, yes, if what you want is to import shapefiles in R, it's easy. Look at the 'maptools' package on CRAN (there is also a 'shapefiles' package). And if you want to build an adjacency matrix for a map of polygons (as I guess from the header of you mail), look at the 'spdep' package, too. It is then possible to write a text file with your data as a list readable by WinBUGS. (I send a copy of my answer to the the R-SIG-GEO mailing list which can be of interest to you). Hope it helps. Christophe -- Christophe DECLERCQ, MD Observatoire Régional de la Santé Nord-Pas-de-Calais 13, rue Faidherbe 59046 LILLE Cedex FRANCE Phone +33 3 20 15 49 24 Fax +33 3 20 55 92 30 E-mail [EMAIL PROTECTED] -Message d'origine- De : [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] la part de Orlando Zacarias Envoyé : mercredi 22 octobre 2003 11:58 À : [EMAIL PROTECTED] Objet : [R] adjacency matrix Dear R experts, I am new to the list and R software. I need to convert arcview file to Winbugs having R has middle package. Got from friends that it is possible following the steps: 1. Converting arcview shapefile to cgm clear text file 2. Downloading convert.r to into R 2.1 use source(convert.r) 2.2 convert(filename_cgm) without the extension. But that doesn't work, given the following errors: R : Copyright 2003, The R Development Core Team Version 1.8.0 (2003-10-08) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for a HTML browser interface to help. Type 'q()' to quit R. [Previously saved workspace restored] source(convert.r) convert(transf) Error in file(file, r) : unable to open connection In addition: Warning message: cannot open file `transf.cgm' --- Have i done some mistakes?Or i am missing some files? Please assist. Rgs, Orlando. [[alternative HTML version deleted]] __ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help __ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help
RE: [R] report generator a la epiinfo
Hi, Lucas
You should try Sweave in the 'tools' package (see
http://www.ci.tuwien.ac.at/~leisch/Sweave/).
You will have to get a TeX/LaTeX distribution and learn a little of LaTeX
but it is worth the effort.
I frequently use R with Sweave on EpiData files (http://www.epidata.dk/)
with great success.
Hope it helps.
Christophe
--
Christophe DECLERCQ, MD
Observatoire Régional de la Santé Nord-Pas-de-Calais
13, rue Faidherbe 59046 LILLE Cedex FRANCE
Phone +33 3 20 15 49 24
Fax +33 3 20 55 92 30
E-mail [EMAIL PROTECTED]
-Message d'origine-
De : [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] la part de Lucas Gonzalez
Santa Cruz
Envoyé : mardi 21 octobre 2003 11:55
À : [EMAIL PROTECTED]
Objet : [R] report generator a la epiinfo
Hi
I'd like to use R in epidemiology and disease surveillance.
In EpiInfo you can have a script (.pgm) which calls a predefined report
(.rpt), where a table is calculated and values picked from that table
and placed where the author of the report wants them, with text around
those values. (Please see example below.)
I've looked at manuals, faq, mail-search and google. The closest is an
R Report Generator email that looked as if it wasn't followed after a
couple of years.
##The script might have something like this:
read.epiinfo(oswego.rec)
report(oswego.rpt, output=oswego.txt)
##The predefined report might have this:
#{ill}
Exactly {YES} people fell ill, and {NO} people didn't.
We don't know about the remaining [({}-{YES}-{NO})*100/{}] percent.
#{icecream ill}
We are specifically interested in the number of people who chose vanilla
and didn't fall ill (all {VANILLA, YES} of them).
Is there anyway to do this with R? Any direction I should look into?
Thanks in advance.
Lucas
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Re: [R] ungrouping grouped data
Something like that? galton2-galton[rep(1:nrow(galton), galton$frequency), 1:2] Christophe - Original Message - From: Michael Friendly [EMAIL PROTECTED] To: r-help [EMAIL PROTECTED] Sent: Thursday, September 25, 2003 7:14 PM Subject: [R] ungrouping grouped data I'm sure this is probably simple, but I can't find an answer... I have a data frame (Galton's data on heights of parents and children), in grouped form, parent child frequency 73.5 72.2 1 73.5 73.2 3 72.5 68.2 1 72.5 69.2 2 72.5 70.2 1 72.5 71.2 2 72.5 72.2 7 72.5 73.2 2 72.5 74.2 4 71.5 65.2 1 71.5 66.2 3 71.5 67.2 4 71.5 68.2 3 71.5 69.2 5 71.5 70.2 10 ... and need the ungrouped equivalent, where each input observation appears the number of times represented by its frequency. In SAS this would be data galton2; set galton; do i=1 to frequency; output; end; I can replicate this in R, but surely there must be an easier way. (In APL2 it would be frequency\[1]galton) thanks, -Michael -- Michael Friendly Email: [EMAIL PROTECTED] Professor, Psychology Dept. York University Voice: 416 736-5115 x66249 Fax: 416 736-5814 4700 Keele Streethttp://www.math.yorku.ca/SCS/friendly.html Toronto, ONT M3J 1P3 CANADA __ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help __ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help
RE: [R] Sweave: pass scale parameter to includegraphics?
Peter,
To set the width of included graphics in your LaTeX document, see the Sweave
manual: http://www.ci.tuwien.ac.at/~leisch/Sweave/Sweave-manual-20030624.pdf
'It also sets the default LATEX figure width (which is
independent of the size of the generated EPS and PDF files).
The current default is \setkeys{Gin}{width=0.8\textwidth} if
you want to use another width for the figures that are
automatically generated and included by Sweave, simply add a
line similar to the one above after \begin{document}.'
Hope it helps.
Christophe
--
Christophe DECLERCQ, MD
Observatoire Régional de la Santé Nord-Pas-de-Calais
13, rue Faidherbe 59046 LILLE Cedex FRANCE
Phone +33 3 20 15 49 24
Fax +33 3 20 55 92 30
E-mail [EMAIL PROTECTED]
De : [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] la part de Peter Dunn
Envoyé : mardi 29 juillet 2003 07:24
À : R mailing list
Objet : [R] Sweave: pass scale parameter to includegraphics?
Hi all
I'm using Sweave and find it a treat. But one
question:
I use Sweave to create my pictures which are
automatically included into LaTeX. For example,
in the file test.Snw, I may have:
% LaTeX stuff
\begin{figure}
fig=true,width=5,height=5=
x1 - seq(1,5, length=10)
x2 - sin(x1)
plot(x1,x2)
@
\caption{Plot}
\end{figure}
% More LaTeX
This produces the LaTeX file test.tex with the
(example) chuck:
% LaTeX stuff
\begin{figure}
\includegraphics{test-001}
\caption{Plot}
\end{figure}
% More LaTeX stuff
But what if I want the chunk to be, for example,
\includegraphics[scale=0.6]{test-001}
rather than the standard, no frills \includegraphics
command? (Why? Because I create a picture that I
want small! Changing width and height within the
= only changes the appearance of the picture--it
alters the x11 window the plot is produced in, not
the final size in my document.)
How can I inform Sweave to create this in the
LaTeX code (not universally, but in the occasional
picture)? More generally, how can I inform Sweave
to pass these types of parameters to the
\includegraphics command?
I have searched archives and all the (obvious to me)
places, but haven't found the solution.
Thanks again,
P.
--
Dr Peter Dunn (USQ CRICOS No. 00244B)
Web:http://www.sci.usq.edu.au/staff/dunn
Email: dunn @ usq.edu.au
Opinions expressed are mine, not those of USQ. Obviously...
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RE: [R] curves with shaded areas?
De : [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] la part de Johannes Fuernkranz [...] I want to make a plot with abline where the area below or above the curve is shaded. I can't find any documentation on that. Can anybody help me with that? [...] You have to play with par(usr). See the toy example below, perhaps a little naive, but it seems to do what you want. ## tmp-rnorm(100) mydf-data.frame(x=tmp, y=0.5*tmp+rnorm(100)) plot(y~x, mydf) myreg-lm(y~x, mydf) abline(myreg) x1-par(usr)[1:2] y1-par(usr)[3] myxy-rbind( cbind(x1, predict(myreg, data.frame(x=x1))), cbind(rev(x1), rep(y1,2)) ) polygon(myxy, col=grey) ## I hope it helps. Christophe -- Christophe DECLERCQ, MD Observatoire Régional de la Santé Nord-Pas-de-Calais 13, rue Faidherbe 59046 LILLE Cedex FRANCE Phone +33 3 20 15 49 24 Fax +33 3 20 55 92 30 E-mail [EMAIL PROTECTED] __ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help
RE: [R] french map
Nathalie, You could have a look at the web site of the Institut Géographique National (http://www.ign.fr) where you can download a free SHAPEFILE with polygon data for the French départements. You can choose one of two projections: LAMBERT II étendu or LAMBERT 93 (http://www.ign.fr/affiche_rubrique.asp?rbr_id=810lng_id=FR). In the associated DBF file, you get the name and the x,y coordinates for the préfecture of each département. You could use these data in R with one of the packages which read shapefiles (for example, 'shapefiles' which is on CRAN or the draft package 'maptools'- see http://spatial.nhh.no/R/ - which is already very useful as it is). I hope it helps. Christophe -- Christophe DECLERCQ, MD Observatoire Régional de la Santé Nord-Pas-de-Calais 13, rue Faidherbe 59046 LILLE Cedex FRANCE Phone +33 3 20 15 49 24 Fax +33 3 20 55 92 30 E-mail [EMAIL PROTECTED] -Message d'origine- De : [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] la part de Peyrard Nathalie Envoyé : lundi 30 juin 2003 15:21 À : [EMAIL PROTECTED] Objet : [R] french map Hello, I would like to know if (as the usa map with Splus), it is possible with R to plot the french map and to add points (representing towns for instance) on the figure in the appropriate (x,y) system. Thank you. Nathalie Peyrard __ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help __ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help
RE: [R] VIM Syntax Highlighting
De : [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] la part de Luke Whitaker Envoyé : mardi 11 mars 2003 12:08 À : [EMAIL PROTECTED] Cc : [EMAIL PROTECTED] Objet : Re: [R] VIM Syntax Highlighting [...] Version 5.6.70 of vim comes with a syntax file for S-lang as standard. Either pick S-lang from the Syntax menu or do :cal SetSyn(slang) on the vim command line. Not surprisingly, this works perfectly well with either S or R. S-lang (see http://www.s-lang.org/) is not R/S... As already said, you should use the 'r.vim' syntax file in recent versions of vim. Christophe -- Christophe DECLERCQ, MD Observatoire Régional de la Santé Nord-Pas-de-Calais 13, rue Faidherbe 59046 LILLE Cedex FRANCE Phone +33 3 20 15 49 24 Fax +33 3 20 55 92 30 E-mail [EMAIL PROTECTED] __ [EMAIL PROTECTED] mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help
RE: [R] VIM Syntax Highlighting
Hi, Fernando
-Message d'origine-
De : [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] la part de Fernando Henrique
Ferraz Pereira da Rosa
Envoyé : lundi 10 mars 2003 01:52
À : [EMAIL PROTECTED]
Objet : [R] VIM Syntax Highlighting
Has anyone got vim to have syntax highlighting with R
function codes? I
know there's something similar that works with emacs (ESS or
something like
that), but I was wondering if anyone knew an equivalent that
worked with vim.
I use the MS-WINDOWS port of vim version 6, which has a syntax file for R by
Tom Payne (see http://linux.clare.cam.ac.uk/~twp20/vim/syntax/r.vim).
You can also use both TeX and R syntax in Sweave files. Below is what I use
in my 'noweb.vim' file:
syntax clear
runtime! syntax/tex.vim
syntax include @nowebR syntax/r.vim
syntax region nowebChunk start=^.*= end=^@ [EMAIL PROTECTED]
syntax region Sexpr start=\\Sexpr{ end=} keepend
hi Sexpr gui=bold guifg=chocolate2
Hope it helps.
Christophe
--
Christophe DECLERCQ, MD
Observatoire Régional de la Santé Nord-Pas-de-Calais
13, rue Faidherbe 59046 LILLE Cedex FRANCE
Phone +33 3 20 15 49 24
Fax +33 3 20 55 92 30
E-mail [EMAIL PROTECTED]
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