[R] Newbie problem ... Forest plot
Hello! I have some data stored into 2 separate csv file. 1 file (called A.csv) (12 results named Group1, Group2, Group3, etc...) odds ratios, 2 file (called B.csv) 12 corresponded errors. How to import that data into R and make forest plot like I saw inside help file Rmeta and meta with included different font colors and names trough X and Y axis. I know for meta libb ... out - metagen(name1,name2) plot(out,xlab=abcd) But I need for my data to look like this? (copy from help file rmeta) library(rmeta) op - par(lend=square, no.readonly=TRUE) data(catheter) a - meta.MH(n.trt, n.ctrl, col.trt, col.ctrl, data=catheter, names=Name, subset=c(13,6,5,3,7,12,4,11,1,8,10,2)) # angry fruit salad metaplot(a$logOR, a$selogOR, nn=a$selogOR^-2, a$names, summn=a$logMH, sumse=a$selogMH, sumnn=a$selogMH^-2, logeffect=TRUE, colors=meta.colors(box=magenta, lines=blue, zero=red, summary=orange, text=forestgreen)) par(op) # reset parameters Of course if someone have better idea to import data - not trough csv file no problem any format is OK - data frame or something else and to make forest plot ... no problem ... I need them on the forest plot. Greetings... Peter Boolton MCA adcc.. __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] Import csv file
Hello! I have some data stored into 2 separate csv file. 1 file (called A.csv) (12 results named Group1, Group2, Group3, etc...) odds ratios, 2 file (called B.csv) 12 corresponded errors. How to import that data into R and make forest plot like I saw inside help file Rmeta and meta with included different font colors and names trough X and Y axis. I know for meta libb ... out - metagen(name1,name2) plot(out,xlab=abcd) But I need for my data to look like this? library(rmeta) op - par(lend=square, no.readonly=TRUE) data(catheter) a - meta.MH(n.trt, n.ctrl, col.trt, col.ctrl, data=catheter, names=Name, subset=c(13,6,5,3,7,12,4,11,1,8,10,2)) # angry fruit salad metaplot(a$logOR, a$selogOR, nn=a$selogOR^-2, a$names, summn=a$logMH, sumse=a$selogMH, sumnn=a$selogMH^-2, logeffect=TRUE, colors=meta.colors(box=magenta, lines=blue, zero=red, summary=orange, text=forestgreen)) par(op) # reset parameters Of course if someone have better idea to import data - not trough csv file no problem any format is OK - data frame or something else and to make forest plot ... no problem ... I need them on the forest plot. Greetings... Peter Boolton MCA adcc.. __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
