Re: [R] R-help Digest, Vol 54, Issue 30

2007-08-31 Thread David Duffy
Ron Crump wrote: Hi, I have a dataframe that contains pedigree information; that is individual, sire and dam identities as separate columns. It also has date of birth. These identifiers are not numeric, or not sequential. Obviously, an identifier can appear in one or two columns,

[R] R Help

2007-08-28 Thread Ola Asteman
I got the Warning message below when I tried to load Locfit. What is wrong? Regards Ola Asteman -- R version 2.4.0 (2006-10-03) Copyright (C) 2006 The R Foundation for Statistical Computing

Re: [R] R Help

2007-08-28 Thread Henrique Dallazuanna
You don't have installed the akima pakage. install.packages(akima, dep=T) -- Henrique Dallazuanna Curitiba-Paraná-Brasil 25° 25' 40 S 49° 16' 22 O On 28/08/07, Ola Asteman [EMAIL PROTECTED] wrote: I got the Warning message below when I tried to load Locfit. What is wrong? Regards Ola

Re: [R] R Help

2007-08-28 Thread Petr PIKAL
[EMAIL PROTECTED] napsal dne 28.08.2007 13:33:13: You don't have installed the akima pakage. install.packages(akima, dep=T) And wait about two months and update your R version to 2.6.0. Or update now to 2.5.1 Regards Petr -- Henrique Dallazuanna Curitiba-Paraná-Brasil 25° 25' 40

Re: [R] R help

2007-06-07 Thread Jim Lemon
scott flemming wrote: Hi, I wonder whether R can finish the following project: I want to make a chart to represent 10 genes. Each gene has orientation and length. Therefore, a gene can be represented by arrows. Can R be used to draw 10 arrows in one line ? Hi Scott, Maybe the

[R] R help

2007-06-06 Thread scott flemming
Hi, I wonder whether R can finish the following project: I want to make a chart to represent 10 genes. Each gene has orientation and length. Therefore, a gene can be represented by arrows. Can R be used to draw 10 arrows in one line ? scott -

Re: [R] R help

2007-06-06 Thread Sarah Goslee
On 6/5/07, scott flemming [EMAIL PROTECTED] wrote: Can R be used to draw 10 arrows in one line ? Um, sure. Assuming you actually also want to know how to do it, why don't you take a look at the help for arrows(). Sarah -- Sarah Goslee http://www.functionaldiversity.org

Re: [R] R help

2007-06-06 Thread michael watson \(IAH-C\)
Yes, but you need to be a bit more specific... When it comes to graphs and drawing lines, there isn't much R can't do... -Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of scott flemming Sent: 06 June 2007 04:49 To: r-help@stat.math.ethz.ch Subject: [R] R

Re: [R] R help

2007-06-06 Thread John Kane
--- scott flemming [EMAIL PROTECTED] wrote: Hi, I wonder whether R can finish the following project: I want to make a chart to represent 10 genes. Each gene has orientation and length. Therefore, a gene can be represented by arrows. Can R be used to draw 10 arrows in one line ?

[R] R-help with apply and ccf

2007-05-22 Thread Michael Andric
Dear R gurus, I would like to use the ccf function on two matrices that are each 196000 x 12. Ideally, I want to be able to go row by row for the two matrices using apply for the ccf function and get one 196000 X 1 array output. The apply function though wants only one array, no? Basically, is

Re: [R] R-help with apply and ccf

2007-05-22 Thread ONKELINX, Thierry
of uncertainties, a surgery of suppositions. ~M.J.Moroney -Oorspronkelijk bericht- Van: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] Namens Michael Andric Verzonden: dinsdag 22 mei 2007 17:35 Aan: r-help@stat.math.ethz.ch Onderwerp: [R] R-help with apply and ccf Dear R gurus, I would like

Re: [R] R-help with apply and ccf

2007-05-22 Thread Bert Gunter
(a[i,],b[i,])) ## Note: value is a vector, not an array Bert Gunter Genentech Nonclinical Statistics -Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Michael Andric Sent: Tuesday, May 22, 2007 8:35 AM To: r-help@stat.math.ethz.ch Subject: [R] R-help

[R] R help- getting same results with different data

2007-04-20 Thread Tina Robles
I am calculating batting averages using the attached code (dye.02_R_code.doc and giambi.03_R_code.doc) and the attached data. I've run this code for several players' data but always get the same results (see attached MLB R CONSOLE.doc). It's obvious that the results wouldn't be exactly the

[R] r-help@stat.math.ethz.ch

2007-02-18 Thread Ivan Baxter
doh-trying again- this time remember text only. Hello all- I am having trouble with the cell sizes that heatmap defaults too. I have a matrix of 160 rows and 5 columns that I am trying to display with heatmap(). When I do this, the cells default to really wide and very short. This makes the

Re: [R] R-help Digest, Vol 46, Issue 27

2006-12-27 Thread Grant Izmirlian
On Wednesday 27 December 2006 06:00, [EMAIL PROTECTED] wrote: jingjiangyan I agree, you can use 'assign'. To be more explicit, you could use the following function. jingjiangyan - function(formula, data) { m - match.call() %,% - function(x,y)paste(x,y,sep=) d.nm - as.character(m$data)

[R] R-Help

2006-12-06 Thread amna khan
Respected Sir I am a very new user of R. I want to ask a question about the nortest package. In this package how we can write the code of ad.test, cvm.test, ks.test for other distributions like GEV, GPA etc. I request you to please guide to me. Kind Regards AMNA -- AMINA SHAHZADI Department of

Re: [R] R-Help

2006-12-06 Thread Uwe Ligges
You might want to contact the nortest maintainer, Juergen Gross (CCing), who is not listening to the traffic on this list. Uwe Ligges amna khan wrote: Respected Sir I am a very new user of R. I want to ask a question about the nortest package. In this package how we can write the code of

[R] R-Help : Warning messages using plot(cox.zph)

2006-11-14 Thread Kathy-Andrée Laplante-Albert
Hi, I get a warning message when I plot cox.zph objects with the transform km and rank, but not with id and log with the same data set. Here's the command: example is a coxph object rk - cox.zph(example, transform='rank') rk plot(rk) and here's the warning message: Warning messages: 1:

[R] R Help

2006-11-11 Thread amna khan
Respected Sir I request you to please fill the following read.table function and read.csvfor my understanding by assuming my data attached with this maiL, because I am fail to run these functions using manual guidlines. read.table(file, header = FALSE, sep = , quote = \', dec = .,

Re: [R] R Help

2006-11-11 Thread David Barron
d - read.table(lahore.txt, header=TRUE) On 11/11/06, amna khan [EMAIL PROTECTED] wrote: Respected Sir I request you to please fill the following read.table function and read.csvfor my understanding by assuming my data attached with this maiL, because I am fail to run these functions using

Re: [R] R Help

2006-11-11 Thread Benilton Carvalho
data = read.delim(lahore.txt) is enough for what you want to do. b On Nov 11, 2006, at 2:11 PM, amna khan wrote: Respected Sir I request you to please fill the following read.table function and read.csvfor my understanding by assuming my data attached with this maiL, because I am fail to

Re: [R] R Help

2006-11-11 Thread Nicolas Mazziotta
Not sure of what you ask... Does it help? $ read.table(Desktop/lahore.txt, header=T) Years lrmax n1 n2 n3 n4 arranged 1 1980 207.6 25 24 23 22 29.4 2 1981 92.7 24 23 22 21 49.4 3 1982 67.5 23 22 21 20 55.1 4 1983 93.8 22 21 20 19 58.0 5 1984 60.6 21 20 19 18

Re: [R] R Help

2006-11-11 Thread Jeffrey Robert Spies
If you were trying to use the sep=\t argument, you might have encountered an error, as there are three tabs one of the two blank lines at the end of your data file. The default for read.table and read.delim (as has been suggested by David and Benilton) is whitespace, which consumes the

[R] R Help

2006-11-09 Thread amna khan
Respected Sir I am very new user of R language. Sir i am facing problems in learning R language reading manuals. Sir is there any possibility of learning it by some tutor online? Sir my research work is going to be late because of not having understanding of R. After a long struggle, I am just

Re: [R] R-help in Newsreader?

2006-11-06 Thread Jens Scheidtmann
Matthias Voigt [EMAIL PROTECTED] writes: Dear list, I am new to this all and therefore have following Newbie question: How can I receive and read R-help mailings in a newsreader like thunderbird? Use gmane.comp.lang.r.general on gmane.org HTH, Jens

[R] R help

2006-11-06 Thread amna khan
*I am a very new user of R. I've spent several hours trying to import data, I am successful in importing data from Excel. After having the data on R console, I am not understanding how to make a file for imported data,so I feel okay asking the list for help. * *I have used save workspace option

[R] R-help in Newsreader?

2006-11-03 Thread Matthias Voigt
Dear list, I am new to this all and therefore have following Newbie question: How can I receive and read R-help mailings in a newsreader like thunderbird? Thanks Matthias _ __

Re: [R] R-help in Newsreader?

2006-11-03 Thread Marc Schwartz
On Fri, 2006-11-03 at 17:36 +0100, Matthias Voigt wrote: Dear list, I am new to this all and therefore have following Newbie question: How can I receive and read R-help mailings in a newsreader like thunderbird? Thanks Matthias If you go to the main R web site

[R] R-help in a newsgroup

2006-07-18 Thread Darren Weber
Hi, I find a lot of the R-help email traffic overloads my inbox. My IT managers are not really happy for me to be subscribed to several high-traffic email lists. I don't want to lose my contact with the R-help emails, so I'm having to consider various ways of handling the traffic. Anyhow, I'm

Re: [R] R-help in a newsgroup

2006-07-18 Thread Marc Schwartz (via MN)
On Tue, 2006-07-18 at 11:30 -0700, Darren Weber wrote: Hi, I find a lot of the R-help email traffic overloads my inbox. My IT managers are not really happy for me to be subscribed to several high-traffic email lists. I don't want to lose my contact with the R-help emails, so I'm having to

Re: [R] R-help in a newsgroup

2006-07-18 Thread Duncan Murdoch
On 7/18/2006 2:30 PM, Darren Weber wrote: Hi, I find a lot of the R-help email traffic overloads my inbox. My IT managers are not really happy for me to be subscribed to several high-traffic email lists. I don't want to lose my contact with the R-help emails, so I'm having to consider

[R] r-help@stat.math.ethz.ch

2006-05-16 Thread Xin
Dear All: I tried to fit negative binomial distribution to data in terms of mean and mean is also a quadratic function of another variable. The likelihood function is: function (parameters, y1,x11) { p-parameters[1] alpha1-parameters[1] beta1-parameters[2] delta1-parameters[3]

Re: [R] r-help at stat.math.ethz.ch

2006-05-16 Thread Ben Bolker
Xin jasonshi510 at hotmail.com writes: Dear All: Then error messga there: initial value in 'vmmin' is not finite In addition: There were 38 warnings (use warnings() to see them). Could you give some advice please? Thanks a lot! Xin Shi [[alternative HTML version

Re: [R] R-help Digest, Vol 39, Issue 13

2006-05-13 Thread Alan Cobo-Lewis
r-help@stat.math.ethz.ch on Saturday, May 13, 2006 at 6:00 AM -0500 wrote: lme(biomass~age, random=~woods/age)? Jörn Consult Pinheiro and Bates (2000, Mixed-effects models in S and S-Plus, Springer, ISBN 0-387-98957-0 ref 7 at http://www.r-project.org/doc/bib/R-books.html ) for how to fit

Re: [R] R-help Digest, Vol 38, Issue 30

2006-04-30 Thread isaac . martin
Mi nueva dirección de correo es: [EMAIL PROTECTED] New e-mail address: [EMAIL PROTECTED] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html

[R] R help

2006-04-25 Thread Erez
Hello, I'm working with large matrix data and i would like to know if there is any way to reduce the size of it because even that I'm increasing the memory limit and that i have 1 gb memory the program throwing me out. There is any way to use a smaller size data (such as using bits or so) to

Re: [R] R help

2006-04-25 Thread Doran, Harold
AM To: r-help@stat.math.ethz.ch Subject: [R] R help Hello, I'm working with large matrix data and i would like to know if there is any way to reduce the size of it because even that I'm increasing the memory limit and that i have 1 gb memory the program throwing me out. There is any way to use

Re: [R] R help

2006-04-25 Thread Gabor Grothendieck
A similar question was just asked. See: http://tolstoy.newcastle.edu.au/R/help/06/04/25898.html On 4/25/06, Erez [EMAIL PROTECTED] wrote: Hello, I'm working with large matrix data and i would like to know if there is any way to reduce the size of it because even that I'm increasing the

[R] R help

2006-04-24 Thread Erez
Hello, I'm trying to create a large matrix and it's extends the limit boundaries. The matrix is 100,000x2874 and R is throwing me out, what shall i do? Thanks Erez __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help

Re: [R] R help

2006-04-24 Thread Petr Pikal
: Mon, 24 Apr 2006 13:06:12 +0200 From: Erez [EMAIL PROTECTED] To: r-help@stat.math.ethz.ch Subject:[R] R help Hello, I'm trying to create a large matrix and it's extends the limit boundaries. The matrix is 100,000x2874 and R is throwing me out

[R] R help

2006-04-24 Thread Erez
Hi, There is anyway to run R script on c++? Erez __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html

[R] R-Help

2006-04-20 Thread stat stat
Dear r-users, Suppose I have three datasets: Dataset-1: Date x y Jan-1,2005120 230 Jan-2,2005123 -125 Jan-3,2005-110 300 Jan-4,2005114 -21 Jan-7,200511299 Mar-5,2005200 311 Dataset-2: Date

Re: [R] R-Help

2006-04-20 Thread Gabor Grothendieck
Read them in as zoo objects (you can replace textConnection(Lines1) with the filename) and then merge them using all = FALSE to retain only common time points. Note that in my English locale I had to modify your Apl to Apr. Lines1 - Date x y Jan-1,2005120 230

Re: [R] R-Help

2006-04-20 Thread john seers \(IFR\)
www.foodandhealthnetwork.com -Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of stat stat Sent: 20 April 2006 09:17 To: r-help@stat.math.ethz.ch Subject: [R] R-Help Dear r-users, Suppose I have three datasets: Dataset-1: Date x y Jan-1,2005

Re: [R] R-help Digest, Vol 38, Issue 19

2006-04-19 Thread isaac . martin
Mi nueva dirección de correo es: [EMAIL PROTECTED] New e-mail address: [EMAIL PROTECTED] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html

Re: [R] R-help Digest, Vol 38, Issue 9

2006-04-09 Thread isaac . martin
Mi nueva dirección de correo es: [EMAIL PROTECTED] New e-mail address: [EMAIL PROTECTED] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html

[R] R-Help List

2006-03-30 Thread Sumanta Basak
Sumanta Basak. Analyst - Quantitative Services Direct Line: +91.80.4151 5842 Mobile : (080) 9886282470 Fax: +91.80.4151 5809 [EMAIL PROTECTED] mailto:[EMAIL PROTECTED] Amba Research India Pvt. Ltd. Second Floor, Block A. Diamond District. # 150, Airport Road. Bangalore -

Re: [R] R-help Digest, Vol 37, Issue 26

2006-03-26 Thread isaac . martin
Mi nueva dirección de correo es: [EMAIL PROTECTED] New e-mail address: [EMAIL PROTECTED] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html

Re: [R] R-help Digest, Vol 37, Issue 15

2006-03-15 Thread isaac . martin
Mi nueva dirección de correo es: [EMAIL PROTECTED] New e-mail address: [EMAIL PROTECTED] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html

Re: [R] R-help Digest, Vol 37, Issue 12

2006-03-12 Thread Ferran Carrascosa
Hi r-users, I would like to know if R have any solution to the Address standardization. The problem is to classify a database of addresses with the real addresses of a streets of Spain. Ideally, I would like to assign Postal code, census data and other geographic information. If this is not

Re: [R] R-help Digest, Vol 37, Issue 12

2006-03-12 Thread Liaw, Andy
From: Ferran Carrascosa Hi r-users, I would like to know if R have any solution to the Address standardization. The problem is to classify a database of addresses with the real addresses of a streets of Spain. Ideally, I would like to assign Postal code, census data and other

Re: [R] R-help list: temporary problem in local archives

2006-03-06 Thread Martin Maechler
Dimitri == Dimitri Szerman [EMAIL PROTECTED] on Mon, 6 Mar 2006 14:17:33 -0300 writes: Dimitri Hi, Dimitri It seems the list faced some problems during the Dimitri weekend, so I am re-sending this message. To be specific: The only problems it saw was that the local

Re: [R] R-help list: temporary problem in local archives

2006-03-06 Thread Martin Maechler
Martin == Martin Maechler [EMAIL PROTECTED] on Mon, 6 Mar 2006 18:37:06 +0100 writes: Dimitri == Dimitri Szerman [EMAIL PROTECTED] on Mon, 6 Mar 2006 14:17:33 -0300 writes: Dimitri Hi, Dimitri It seems the list faced some problems during the Dimitri weekend, so I am

Re: [R] R-help Digest, Vol 37, Issue 1

2006-03-01 Thread isaac . martin
Mi nueva dirección de correo es: [EMAIL PROTECTED] New e-mail address: [EMAIL PROTECTED] __ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html

Re: [R] R-help Digest, Vol 36, Issue 21

2006-02-21 Thread Evgeniy Kachalin
Hello, dear R users. I've already sent a question here, but I'm not sure that it had been read. I need to visualize classification of my numerical data based on 2-3 factors. As I suppose, the best way is a tree. With an orbitrary function at the ends (leaves), or at least with means of my data

Re: [R] R-help Digest, Vol 36, Issue 21

2006-02-21 Thread Evgeniy Kachalin
Evgeniy Kachalin wrote: Hello, dear R users. I've already sent a question here, but I'm not sure that it had been read. I need to visualize classification of my numerical data based on 2-3 factors. As I suppose, the best way is a tree. With an orbitrary function at the ends (leaves), or

[R] R-help, specifying the places to decimal

2006-02-13 Thread Subhabrata
Hello - R-experts, Is there any way with which we can specify the number after decimal point to take. Like I have a situation where the values are comming 0.160325923 but I only want 4 place to decimal say 0.1603. Is there any way for that. I am no expert in R- and this may sound simple to

Re: [R] R-help, specifying the places to decimal

2006-02-13 Thread Dimitris Rizopoulos
://www.student.kuleuven.be/~m0390867/dimitris.htm - Original Message - From: Subhabrata [EMAIL PROTECTED] To: r-help r-help@stat.math.ethz.ch Sent: Monday, February 13, 2006 9:33 AM Subject: [R] R-help, specifying the places to decimal Hello - R-experts, Is there any way with which we

Re: [R] R-help, specifying the places to decimal

2006-02-13 Thread Vivek Satsangi
(digits)-3), ...) (Begin quoted message) Date: Mon, 13 Feb 2006 14:03:55 +0530 From: Subhabrata [EMAIL PROTECTED] Subject: [R] R-help, specifying the places to decimal To: r-help r-help@stat.math.ethz.ch Message-ID: [EMAIL PROTECTED] Content-Type: text/plain; charset=iso-8859-1 Hello - R-experts

Re: [R] R-help Digest, Vol 35, Issue 24

2006-01-25 Thread Ted Harding
I've been reluctant to step into this topic, but now feel that it may be helpful to make a certain point. On the internet, for the most part, the person behind the email is invisible and intangible. It is therefore possible, when someone puts their foot down, to stamp inadvertently on someone

Re: [R] R-help Digest, Vol 35, Issue 24

2006-01-25 Thread François Pinard
[Gabor Grothendieck] [...] this list is inhabited by some rather rude participants but everyone puts up with them in the hope that they do have some useful remarks. I've been witnessing this list for about one year, and also read *lots* of archived messages. While it is true that a few members

Re: [R] R-help Digest, Vol 35, Issue 24

2006-01-24 Thread Keith . Chamberlain
Dear Prof Ripley, First of all, unless you are an english professor, then I do not think you have any business policing language. I'm still very much a student, both in R, and regarding signal analysis. My competence on the subject as compared too your own level of expertise, or my spelling for

Re: [R] R-help Digest, Vol 35, Issue 24

2006-01-24 Thread Spencer Graves
Dear Mr. Chamberlain: You asked for free consulting, and as near as I can tell, you got pretty good advice. Now you complain that you don't like the packaging. If you can't stand the heat, get out of the kitchen. Professor Brian Ripley has an international reputation

Re: [R] R-help Digest, Vol 35, Issue 24

2006-01-24 Thread François Pinard
[EMAIL PROTECTED], addressing to Brian Ripley] First of all, unless you are an english professor, then I do not think you have any business policing language. We all do mistakes (English or otherwise). I'm very grateful that people forgive my own errors, and I try to be tolerant to others.

Re: [R] R-help Digest, Vol 35, Issue 24

2006-01-24 Thread Gabor Grothendieck
Its not really you. Its a fact of life that this list is inhabited by some rather rude participants but everyone puts up with them in the hope that they do have some useful remarks. This has been discussed repeatedly on the list and there is even a group of thought that feels it is a justifiable

Re: [R] R-help Digest, Vol 35, Issue 23

2006-01-23 Thread Dr. Herwig Meschke
summary.aov(aovRes, split=list(interval = list(i1 vs i2 = 1, i2 vs i3 = 2, i3 vs i4 = 3, i4 vs i5 = 4, i5 vs i6 = 5))) try class(aovRes) #- aovlist ! summary.aovlist(aovRes, spit=...) or simply summary(aovRes, spit=...) Hoping this helps, Herwig -- Dr. Herwig Meschke Wissenschaftliche

[R] r-help, how can i use my own distance matrix without using dist()

2006-01-18 Thread ucecgxu
Dear R-helpers, i am a beginner of R and i am using cluster package to do hierarchical clustering i am wondering if i can use my own distance matrix to do the hierarchical clustering without using dist() function. if i have my own distance matrix, how can i ask hclust() function to recongnize

Re: [R] r-help, how can i use my own distance matrix without usin g dist()

2006-01-18 Thread Liaw, Andy
Use something like hclust(as.dist(mydist), ...) ought to work. Andy -Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of [EMAIL PROTECTED] Sent: Wednesday, January 18, 2006 4:47 PM To: r-help@stat.math.ethz.ch Subject: [R] r-help, how can i use my own

Re: [R] r-help, how can i use my own distance matrix without using dist()

2006-01-18 Thread Marco Geraci
see ?dist there's an example x - matrix(rnorm(100), nrow=5) m - as.matrix(dist(x)) d - as.dist(m) 'as.dist' is what you're probably looking for regards, Marco [EMAIL PROTECTED] wrote: Dear R-helpers, i am a beginner of R and i am using cluster

Re: [R] R-help Digest, Vol 35, Issue 14

2006-01-16 Thread Achim Zeileis
On Sun, 15 Jan 2006, Werner Wernersen wrote: Dear all, Is anybody aware of a tutorial, introduction, overview or alike for cluster analysis with R? I have been searching for something like that but it seems there are only a few rather specialized articles around. As an overview (rather

Re: [R] R-help Digest, Vol 35, Issue 14

2006-01-14 Thread Werner Wernersen
Dear all, Is anybody aware of a tutorial, introduction, overview or alike for cluster analysis with R? I have been searching for something like that but it seems there are only a few rather specialized articles around. I would very much appreciate any hint. Thanks a million, Werner

Re: [R] R-help Digest, Vol 35, Issue 14

2006-01-14 Thread Prof Brian Ripley
On Sun, 15 Jan 2006, Werner Wernersen wrote: Is anybody aware of a tutorial, introduction, overview or alike for cluster analysis with R? I have been searching for something like that but it seems there are only a few rather specialized articles around. Chapter 11 of MASS (the book

Re: [R] R-help Digest, Vol 35, Issue 7

2006-01-08 Thread Evgeniy Kachalin
Uwe Ligges пишет: Evgeniy Kachalin wrote: Hello, dear participants! Could you tip me, is there any simple and nice way to build scatter-plot for three different types of data (, and o and * - signs, for example) with legend. Now i can guess only that way:

Re: [R] R-help Digest, Vol 35, Issue 7

2006-01-08 Thread Kyosti H Kurikka
Hi! Just use your factors for indexing c(15,16,17) and c(red,green,blue). So, with the iris data: with(iris, plot(Sepal.Length, Sepal.Width, pch=c(15,16,17)[as.integer(Species)], col=c(red,green,blue)[as.integer(Species)] )) Best regards, Kyosti Kurikka Evgeniy Kachalin wrote:

Re: [R] R-help Digest, Vol 35, Issue 7

2006-01-08 Thread Uwe Ligges
Evgeniy Kachalin wrote: Uwe Ligges пишет: Evgeniy Kachalin wrote: Hello, dear participants! Could you tip me, is there any simple and nice way to build scatter-plot for three different types of data (, and o and * - signs, for example) with legend. Now i can guess only that way:

Re: [R] R-help Digest, Vol 35, Issue 7

2006-01-07 Thread Evgeniy Kachalin
Hello, dear participants! Could you tip me, is there any simple and nice way to build scatter-plot for three different types of data (, and o and * - signs, for example) with legend. Now i can guess only that way: plot(x~y,data=subset(mydata,factor1=='1'), pch='.',col='blue')

Re: [R] R-help Digest, Vol 35, Issue 7

2006-01-07 Thread Uwe Ligges
Evgeniy Kachalin wrote: Hello, dear participants! Could you tip me, is there any simple and nice way to build scatter-plot for three different types of data (, and o and * - signs, for example) with legend. Now i can guess only that way: plot(x~y,data=subset(mydata,factor1=='1'),

Re: [R] R-help: gls with correlation=corARMA

2005-12-12 Thread gaffigan
Thank you for your extra efforts in pinpointing the source of my problem. That is a smart workaround, to reduce the parameters until invertibility conditions are satisfied. The concern in my case is what effect the constant will have on the covariance matrix and the resulting estimates for the

Re: [R] R-help Digest, Vol 34, Issue 14

2005-12-11 Thread Dominik Schaub
Guten Tag, Ich bin vom 12. bis 23. Dezember 2005 im Militär-WK. Ich werde die Mails somit nur verzögert beantworten können. Für dringende Fälle: Während diesen zwei Wochen bin ich via Natel (am besten per SMS) erreichbar unter der Nummer 079 438 27 68. Mit freundlichem Gruss Dominik Schaub

Re: [R] R-help: gls with correlation=corARMA

2005-12-11 Thread Spencer Graves
The error message is misleading. It should say something like, Error in corARMA(q = 25, value = -ma.coefs, fixed = T) : The moving average process specified is not invertible, having roots outside the unit circle. Instead it says, Error in corARMA(q = 25, value = -ma.coefs, fixed =

[R] R-help: gls with correlation=corARMA

2005-12-09 Thread gaffigan
Dear Madams/Sirs, Hello. I am using the gls function to specify an arma correlation during estimation in my model. The parameter values which I am sending the corARMA function are from a previous fit using arima. I have had some success with the method, however in other cases I get the

[R] R-help: gls with correlation=corARMA

2005-12-08 Thread gaffigan
Dear Madams/Sirs, Hello. I am using the gls function to specify an arma correlation during estimation in my model. The parameter values which I am sending the corARMA function are from a previous fit using arima. I have had some success with the method, however in other cases I get the

Re: [R] R-help Digest, Vol 33, Issue 27

2005-11-27 Thread A.J. Rossini
From: Duncan Murdoch [EMAIL PROTECTED] I'd recommend using the RWinEdt package instead for a different way to integrate winedit with R. winedit and winedt are two different editors, last I checked. best, -tony [EMAIL PROTECTED] Muttenz, Switzerland. Commit early,commit often, and commit in

[R] R-help: conversion of long decimal numbers into hexadecimal

2005-11-10 Thread Antje Döring
Hi there, could somebody help me to convert a decimal number into a hexadecimal number? I know that there is the function sprintf, but the numbers I want to convert consist of 20 or more numbers. Spintf is not able to convert these big numbers. Thanks for any help. Antje

[R] R-help: conversion of long decimal numbers into hexadecimal numbers

2005-11-10 Thread Antje Döring
Hi there, could somebody help me to convert a decimal number into a hexadecimal number? I know that there is the function sprintf, but the numbers I want to convert consist of 20 or more numbers. Spintf is not able to convert these big numbers. Thanks for any help. Antje Döring

Re: [R] R-help: conversion of long decimal numbers into hexadeci

2005-11-10 Thread Ted Harding
On 10-Nov-05 Antje Döring wrote: Hi there, could somebody help me to convert a decimal number into a hexadecimal number? I know that there is the function sprintf, but the numbers I want to convert consist of 20 or more numbers. Spintf is not able to convert these big numbers. If I

[R] R help

2005-11-05 Thread Yuying Shi
Dear Sir/Madam, My purpose is to write an R function to solve the quadratic equation ax2+bx+c=0. The input should be an array of a, b, and c from a data set a b c 1 4 3 1 4 5 0 2 5 0 0 6 The output with the possibility of complex roots and one root or no root should look like the following. A

Re: [R] R-help Digest, Vol 32, Issue 26

2005-10-26 Thread Alan Cobo-Lewis
r-help@stat.math.ethz.ch on Wednesday, October 26, 2005 at 6:00 AM -0500 wrote: Ronaldo, Try Harold's suggestion. The df still won't agree, because lmer (at least in its current version) just puts an upper bound on the df. But that should be OK, because all those t tests are approximations

Re: [R] R-help Digest, Vol 32, Issue 26

2005-10-26 Thread Doran, Harold
PROTECTED] On Behalf Of Alan Cobo-Lewis Sent: Wednesday, October 26, 2005 8:53 AM To: r-help@stat.math.ethz.ch Subject: Re: [R] R-help Digest, Vol 32, Issue 26 r-help@stat.math.ethz.ch on Wednesday, October 26, 2005 at 6:00 AM -0500 wrote: Ronaldo, Try Harold's suggestion. The df still won't agree

Re: [R] R-help Digest, Vol 31, Issue 30

2005-09-30 Thread John Maindonald
With lme4, use of mcmcsamp can be insightful. (Douglas Bates drew my attention to this function in a private exchange of emails.) The distributions of random effects are simulated on a log scale, where the distributions are much closer to symmetry than on the scale of the random effects

Re: [R] R-help Digest, Vol 31, Issue 9

2005-09-10 Thread Wuming Gong
?summary.lm and check the Value section. Wuming On 9/10/05, Ping Yao [EMAIL PROTECTED] wrote: Hi: I use lm (linear model) to analyze 47 variables , 8 responses So I use loop to finish it . I want the program to show the results that P-value is less than 0.05. How can I cite the P-valus from

Re: [R] R-help Digest, Vol 31, Issue 9

2005-09-10 Thread Wuming Gong
Hi Ping, You can use zz$coefficients[,4] to get the p values for each estimated coefficients in your context. Wuming On 9/11/05, Ping Yao [EMAIL PROTECTED] wrote: Wuming: Thanks for your help. I use the fuction: call(fstatistic,zz) call(p-value,zz) I can

Re: [R] R-help Digest, Vol 31, Issue 9

2005-09-09 Thread Ping Yao
Hi: I use lm (linear model) to analyze 47 variables , 8 responses So I use loop to finish it . I want the program to show the results that P-value is less than 0.05. How can I cite the P-valus from lm result ? Ping The code: #using LM to model general fati for (j in 48:52) { for (i in 3:46){

Re: [R] R-help Digest, Vol 30, Issue 26

2005-08-26 Thread Jean-Marc Ottorini
Dear R helpers, For me ( i.e. R 2.1.1 on Mac OS X), using trellis.device (postscript, onefile = F, etc ... with the lattice library within a R function works fine to obtain the desired graph as an EPS file , provided that : 1) the command dev.off() is not included in this function

Re: [R] R-help

2005-08-22 Thread Mike Waters
depends upon a lex (flex) library being available. Regards, Mike -Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of HM Diego Hernán Sent: 22 August 2005 18:47 To: r-help@stat.math.ethz.ch Subject: [R] R-help Hello I need help with the way to install

[R] R Help

2005-08-12 Thread Nikhil Shah
Hi, I have query regarding R Rserve. In Rserve, there is a way to capture Errors by RSrvException class, but is there any way to capture warning messages? I have found that there is warnings() command in R, which lists the last warning message, but I am not able to get the warning message

Re: [R] R-help Digest, Vol 30, Issue 6

2005-08-08 Thread David Duffy
On Fri, 5 Aug 2005 Julia Reid wrote: Subject: [R] GAP pointer I am trying to do a simple segregation analysis using the GAP package. I have the documentation for pointer but I desperately need an example so that I can see how to format the datfile and the jobfile. For each individual, I

Re: [R] R-help Digest, Vol 28, Issue 28

2005-06-28 Thread A. Mani
On Tuesday 28 June 2005 15:30, [EMAIL PROTECTED] wrote: Re : 37. Re: A. Mani : colours in Silhouette (Mulholland, Tom) Message: 37 Date: Tue, 28 Jun 2005 09:08:24 +0800 From: Mulholland, Tom [EMAIL PROTECTED] Subject: Re: [R] A. Mani : colours in Silhouette To: [EMAIL PROTECTED],

[R] r-help

2005-06-25 Thread Sotdikov Mansor
There is a function 'simMD()' in 'popgen' library which simulates a sample of genotype data as follows: library(popgen) x - simMD(20, 2, 2, p = NULL, c(0.09, 0.05), ac = 2, beta = 1) x , , 1 [,1] [,2] [1,]11 [2,]11 ... [37,]12 [38,]22 [39,]2

Re: [R] r-help

2005-06-25 Thread Uwe Ligges
Sotdikov Mansor wrote: There is a function 'simMD()' in 'popgen' library which package, not library. simulates a sample of genotype data as follows: library(popgen) x - simMD(20, 2, 2, p = NULL, c(0.09, 0.05), ac = 2, beta = 1) x , , 1 [,1] [,2] [1,]11 [2,]1

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