Re: [R] A question on memory size

2006-05-16 Thread Uwe Ligges
Nancy Lo wrote: Hi, I am using a note book computer to do simulation. Even I added a commend line in the shortcut on my desktop for R. I still get a message saying reached total memory allocation of 502 Mb. Any suggestions will be welcome. Nancy Please specify more details, as the

[R] A question on memory size

2006-05-15 Thread Nancy Lo
Hi, I am using a note book computer to do simulation. Even I added a commend line in the shortcut on my desktop for R. I still get a message saying reached total memory allocation of 502 Mb. Any suggestions will be welcome. Nancy -- Nancy C.H. Lo, Ph.D Southwest Fisheries Science Center 8604

Re: [R] A question on memory size

2006-05-15 Thread Rense Nieuwenhuis
Hi Nancy, in contrast with some other statistical packages (such as SPSS) R puts all the data in active memory. In theory this should make R faster than SPSS, because SPSS reads the data-file of the harddisk when analysing it (this counts for large files). Disadvantage of this behavior

[R] A question about memory size

2004-08-19 Thread Stephanie Tsung
Hi I have a question about how to increase my memory size, could someone answer it for me?? I am using Bioconductor in R to calculate gene expression values with mas5, dchip, and mas4. I have only 18 samples, all from Affymetrix U133A Plus 2 arrays, which has ~54,000 genes. My machine

Re: [R] A question about memory size

2004-08-19 Thread Prof Brian Ripley
Please read the rw-FAQ, as the posting guide asks. The answer is there. On Thu, 19 Aug 2004, Stephanie Tsung wrote: I have a question about how to increase my memory size, could someone answer it for me?? I am using Bioconductor in R to calculate gene expression values with mas5, dchip,