Re: [R] Hmisc/Design and problem with cgroup

2005-05-24 Thread Uwe Ligges 

Frank E Harrell Jr wrote:


Uwe Ligges wrote:


Aric Gregson wrote:


On 5/17/05 21:44 Frank E Harrell Jr sent the following:



Aric Gregson wrote:


Hello,

I am trying to use the following to output a table to latex:

cohortbyagesummary - by(data.frame(age,ethnicity), cohort, summary)
w - latex.default(cohortbyagesummary,caption=Five Number Age 
Summaries by Cohort,

   label=agesummarybycohort,cgroup=c('hello','goodbye','hello'),
   colheads=c(Age,Ethnicity),
   extracolheads=c('hello','goodbye'),greek=TRUE,
   ctable=TRUE)
   I am not able to get the major column headings of cgroup to work. I
receive the error:
   Object cline not found



See if a modified version at
http://biostat.mc.vanderbilt.edu/cgi-bin/cvsweb.cgi/Hmisc/R/latex.s
fixes your problem.





Dr. Harrell,

Thanks for your help. I have downloaded latex.s, but am unable to figure
out where it should go. How do I ensure that it is called when I load
Hmisc? Do I patch it against R/Hmisc?

I have a local directory structure in ~/Library/R/library/Hmisc/:

-rw-r--r--  1 user  user  594 12 May 19:20 CITATION
-rw-r--r--  1 user  user  989 12 May 19:20 DESCRIPTION
drwxr-xr-x  3 user  user  102 12 May 19:20 Meta/package.rds
drwxr-xr-x  3 user  user  102 12 May 19:20 R/Hmisc
drwxr-xr-x  3 user  user  102 12 May 19:20 libs/Hmisc.so

Thanks for your patience.





Your directory structure is from an installed binary package. You need 
to replace the file in the *source* package and *install* the source 
package after that.


Uwe Ligges



A better approach is just to source( ) in the new version after 
library(Hmisc) is issued.  You can put latex.s anywhere, just put that 
path in the source( ).  A new version of Hmisc will include the fix.


Please note that this does now work generally if a NAMESPACE is involved 
(which seems not to be the case here).


Uwe



Frank




aric

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Re: [R] Hmisc/Design and problem with cgroup

2005-05-22 Thread Aric Gregson 
On 5/17/05 21:44 Frank E Harrell Jr sent the following:

Aric Gregson wrote:
 Hello,
 
 I am trying to use the following to output a table to latex:
 
 cohortbyagesummary - by(data.frame(age,ethnicity), cohort, summary) 
 
 w - latex.default(cohortbyagesummary, 
 caption=Five Number Age Summaries by Cohort,
 label=agesummarybycohort, 
 cgroup=c('hello','goodbye','hello'),
 colheads=c(Age,Ethnicity),
 extracolheads=c('hello','goodbye'), 
 greek=TRUE,
 ctable=TRUE)
 
 I am not able to get the major column headings of cgroup to work. I
 receive the error:
 Object cline not found
 
See if a modified version at
http://biostat.mc.vanderbilt.edu/cgi-bin/cvsweb.cgi/Hmisc/R/latex.s
fixes your problem.

Dr. Harrell,

Thanks for your help. I have downloaded latex.s, but am unable to figure
out where it should go. How do I ensure that it is called when I load
Hmisc? Do I patch it against R/Hmisc?

I have a local directory structure in ~/Library/R/library/Hmisc/:

-rw-r--r--  1 user  user  594 12 May 19:20 CITATION
-rw-r--r--  1 user  user  989 12 May 19:20 DESCRIPTION
drwxr-xr-x  3 user  user  102 12 May 19:20 Meta/package.rds
drwxr-xr-x  3 user  user  102 12 May 19:20 R/Hmisc
drwxr-xr-x  3 user  user  102 12 May 19:20 libs/Hmisc.so

Thanks for your patience.

aric

__
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https://stat.ethz.ch/mailman/listinfo/r-help
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Re: [R] Hmisc/Design and problem with cgroup

2005-05-22 Thread Frank E Harrell Jr 

Uwe Ligges wrote:

Aric Gregson wrote:


On 5/17/05 21:44 Frank E Harrell Jr sent the following:



Aric Gregson wrote:


Hello,

I am trying to use the following to output a table to latex:

cohortbyagesummary - by(data.frame(age,ethnicity), cohort, summary)
w - latex.default(cohortbyagesummary,caption=Five Number Age 
Summaries by Cohort,

   label=agesummarybycohort,cgroup=c('hello','goodbye','hello'),
   colheads=c(Age,Ethnicity),
   extracolheads=c('hello','goodbye'),greek=TRUE,
   ctable=TRUE)
   I am not able to get the major column headings of cgroup to work. I
receive the error:
   Object cline not found



See if a modified version at
http://biostat.mc.vanderbilt.edu/cgi-bin/cvsweb.cgi/Hmisc/R/latex.s
fixes your problem.




Dr. Harrell,

Thanks for your help. I have downloaded latex.s, but am unable to figure
out where it should go. How do I ensure that it is called when I load
Hmisc? Do I patch it against R/Hmisc?

I have a local directory structure in ~/Library/R/library/Hmisc/:

-rw-r--r--  1 user  user  594 12 May 19:20 CITATION
-rw-r--r--  1 user  user  989 12 May 19:20 DESCRIPTION
drwxr-xr-x  3 user  user  102 12 May 19:20 Meta/package.rds
drwxr-xr-x  3 user  user  102 12 May 19:20 R/Hmisc
drwxr-xr-x  3 user  user  102 12 May 19:20 libs/Hmisc.so

Thanks for your patience.




Your directory structure is from an installed binary package. You need 
to replace the file in the *source* package and *install* the source 
package after that.


Uwe Ligges


A better approach is just to source( ) in the new version after 
library(Hmisc) is issued.  You can put latex.s anywhere, just put that 
path in the source( ).  A new version of Hmisc will include the fix.


Frank




aric

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http://www.R-project.org/posting-guide.html



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--
Frank E Harrell Jr   Professor and Chair   School of Medicine
 Department of Biostatistics   Vanderbilt University

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[R] Hmisc/Design and problem with cgroup

2005-05-17 Thread Aric Gregson 
Hello,

I am trying to use the following to output a table to latex:

cohortbyagesummary - by(data.frame(age,ethnicity), cohort, summary) 

w - latex.default(cohortbyagesummary, 
caption=Five Number Age Summaries by Cohort,
label=agesummarybycohort, 
cgroup=c('hello','goodbye','hello'),
colheads=c(Age,Ethnicity),
extracolheads=c('hello','goodbye'), # demonstration of subheadings
greek=TRUE,
ctable=TRUE)

I am not able to get the major column headings of cgroup to work. I
receive the error:
Object cline not found

I do not see in the examples or documentation that you must specify
cline or anything. 

Any suggestions? Thanks very much,

aric

R 2.0.1
Design 2.0-11
Hmisc  3.0-5
OS X 10.3.9

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