[R] R as a server on Linux

2007-04-24 Thread Markus Loecher
Hi,
I am trying to avid the somewhat costly startup overhead of launching 
a separate R executable for each client request on Linux.
My current architecture is such that My Java client explicitly calls 
R in batch mode and passes it certain parameters. The initital 
startup takes almost 10 seconds because R has to load a bunch of 
libraries as well as a moderately large, previously created workspace.
I am thinking that it would be so much more eficient to instead have 
R act as a server and fork off a thread for each client query. Is 
that possible at all ?

Thanks!
Markus

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Re: [R] R as a server on Linux

2007-04-24 Thread Dirk Eddelbuettel
On Tue, Apr 24, 2007 at 02:15:43PM -0400, Markus Loecher wrote:
 Hi,
 I am trying to avid the somewhat costly startup overhead of launching 
 a separate R executable for each client request on Linux.
 My current architecture is such that My Java client explicitly calls 
 R in batch mode and passes it certain parameters. The initital 
 startup takes almost 10 seconds because R has to load a bunch of 
 libraries as well as a moderately large, previously created workspace.
 I am thinking that it would be so much more eficient to instead have 
 R act as a server and fork off a thread for each client query. Is 
 that possible at all ?

Yes. Google for 

   RServe   -- headless R server, has Java interface
   RApache  -- R added to Apache
   
Hth, Dirk   
   
-- 
Hell, there are no rules here - we're trying to accomplish something. 
  -- Thomas A. Edison

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Re: [R] R as a server on Linux

2007-04-24 Thread Gregory Warnes

Hi Markus,

Take a look at RSOAP (http://rsoap.sf.net).  It was designed for  
handling concurrent client connections to R, and minimizes the per- 
connection startup time by pre-starting R and forking of processes as  
requests come in.  Each client can maintain a stateful connection, if  
desired.

-G



On Apr 24, 2007, at 2:15PM , Markus Loecher wrote:

 Hi,
 I am trying to avid the somewhat costly startup overhead of launching
 a separate R executable for each client request on Linux.
 My current architecture is such that My Java client explicitly calls
 R in batch mode and passes it certain parameters. The initital
 startup takes almost 10 seconds because R has to load a bunch of
 libraries as well as a moderately large, previously created workspace.
 I am thinking that it would be so much more eficient to instead have
 R act as a server and fork off a thread for each client query. Is
 that possible at all ?

 Thanks!
 Markus

 __
 R-help@stat.math.ethz.ch mailing list
 https://stat.ethz.ch/mailman/listinfo/r-help
 PLEASE do read the posting guide http://www.R-project.org/posting- 
 guide.html
 and provide commented, minimal, self-contained, reproducible code.

__
R-help@stat.math.ethz.ch mailing list
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


Re: [R] R as a server on Linux

2007-04-24 Thread Martin Morgan
RWebServices

http://wiki.fhcrc.org/caBioc/

offers a more structured approach to this -- map R functions and data
classes to their Java representation, expose Java as a web service,
service requests using persistent R workers.

Martin

Markus Loecher [EMAIL PROTECTED] writes:

 Hi,
 I am trying to avid the somewhat costly startup overhead of launching 
 a separate R executable for each client request on Linux.
 My current architecture is such that My Java client explicitly calls 
 R in batch mode and passes it certain parameters. The initital 
 startup takes almost 10 seconds because R has to load a bunch of 
 libraries as well as a moderately large, previously created workspace.
 I am thinking that it would be so much more eficient to instead have 
 R act as a server and fork off a thread for each client query. Is 
 that possible at all ?

 Thanks!
 Markus

 __
 R-help@stat.math.ethz.ch mailing list
 https://stat.ethz.ch/mailman/listinfo/r-help
 PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
 and provide commented, minimal, self-contained, reproducible code.

-- 
Martin Morgan
Bioconductor / Computational Biology
http://bioconductor.org

__
R-help@stat.math.ethz.ch mailing list
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.