Thank you
Bartjoosen schrieb:
Take a look at the EBImage package at bioconductor:
http://bioconductor.org/packages/2.0/bioc/html/EBImage.html
Bart
mimo-2 wrote:
Hi,
Are there more sophisticated means to access R-images via Rserve than:
Rconnection c=new Rconnection(127.0.0.1);
Take a look at the EBImage package at bioconductor:
http://bioconductor.org/packages/2.0/bioc/html/EBImage.html
Bart
mimo-2 wrote:
Hi,
Are there more sophisticated means to access R-images via Rserve than:
Rconnection c=new Rconnection(127.0.0.1);
REXP
yoo wrote:
Yea, I found the shutdown function in the java interface as well.. but is
there a way I can send a shutdown command through linux shell? (something
that I can cron?)
Write a minimal java program that sends the shutdown command, then run
that from your shell...
/obvious
Hi all, is there a way to properly terminate Rserve instead of killing the
process? I run Rserve in a linux box that serves my Java client.. I have a
cronjob that runs Rserve every morning. However, I'm killing it at night
manually for the moment. Is there a way, given host/port, I can run an R
On 11 August 2007 at 11:00, yoo wrote:
| Hi all, is there a way to properly terminate Rserve instead of killing the
| process? I run Rserve in a linux box that serves my Java client.. I have a
| cronjob that runs Rserve every morning. However, I'm killing it at night
| manually for the
Yea, I found the shutdown function in the java interface as well.. but is
there a way I can send a shutdown command through linux shell? (something
that I can cron?)
Thanks!!
- yoo
Dirk Eddelbuettel wrote:
On 11 August 2007 at 11:00, yoo wrote:
| Hi all, is there a way to
hi, R-ers
Can anybody tell why
--
String cmd = new
String(scan(\tes.txt\,skip=1,nlines=1));
double[] d = (double[]) c.eval(cmd).getContent();
--
fail
while
--
double[] d = (double[])
c.eval(rnorm(100)).getContent();
--
succeed?
Seems the only difference is the first command has
Hi, I have also tried to install the Rserve package on my machine. I am able
to load with with library(Rserve), but when I trype Rserve() to start the
server, I get the following message:
Rserve()
Stating Rserve...
C:/PROGRA~1/R/R-25~1.0/library/Rserve/Rserve.exeWarning message:
'Sys.putenv'
On 4/11/07, AJ Rossini [EMAIL PROTECTED] wrote:
On Tuesday 10 April 2007 23:17, Ramon Diaz-Uriarte wrote:
Of course, you are right there. I think that might still be the case.
At the time we made our decision, and decided to go for MPI, MPI 2 was
already out, and MPI seemed more like the
On Monday 09 April 2007 23:02, Ramon Diaz-Uriarte wrote:
(Yes, maybe I should check snowFT, but it uses PVM, and I recall a
while back there was a reason why we decided to go with MPI instead of
PVM).
There is no reason that you can't run both MPI and PVM on the same cluster.
There is a
On 4/10/07, AJ Rossini [EMAIL PROTECTED] wrote:
On Monday 09 April 2007 23:02, Ramon Diaz-Uriarte wrote:
(Yes, maybe I should check snowFT, but it uses PVM, and I recall a
while back there was a reason why we decided to go with MPI instead of
PVM).
There is no reason that you can't run
On Tuesday 10 April 2007 23:17, Ramon Diaz-Uriarte wrote:
Of course, you are right there. I think that might still be the case.
At the time we made our decision, and decided to go for MPI, MPI 2 was
already out, and MPI seemed more like the current/future standard
than PVM.
That's always
Hi Ramon,
I've been interested in responses to your question. I have what I
think is a similar issue - I have a very large simulation script and
would like to be able to modularize it by having a main script that
calls lots of subscripts - but I haven't done that yet because the
only way I could
On Apr 7, 2007, at 10:56 AM, Ramon Diaz-Uriarte wrote:
Dear All,
The clients.txt file of the latest Rserve package, by Simon
Urbanek, says, regarding its R client,
(...) a simple R client, i.e. it allows you to connect to Rserve
from R itself. It is very simple and limited, because
Matthew Keller wrote:
Hi Ramon,
I've been interested in responses to your question. I have what I
think is a similar issue - I have a very large simulation script and
would like to be able to modularize it by having a main script that
calls lots of subscripts -
For simulations you need to
Hi Paul,
Thanks for your message, but I'm not 100% clear on your meaning. Could
you unpack your logic a bit? Is this because two (+) sub-processes
that are begun at precisely the same time will both have the same
set.seed value (by default) for any RNG?
Matt
On 4/9/07, Paul Gilbert [EMAIL
You may find it easier to use NetWorkSpaces for R (see http://nws-
r.sourceforge.net/), which provides a simple mechanism for sending
tasks to worker R processes and collect the results back when done.
-G
On Apr 9, 2007, at 12:08PM , Matthew Keller wrote:
Hi Ramon,
I've been interested
Matthew Keller wrote:
Hi Paul,
Thanks for your message, but I'm not 100% clear on your meaning. Could
you unpack your logic a bit? Is this because two (+) sub-processes
that are begun at precisely the same time will both have the same
set.seed value (by default) for any RNG?
That seems a bit
On 4/9/07, Simon Urbanek [EMAIL PROTECTED] wrote:
On Apr 7, 2007, at 10:56 AM, Ramon Diaz-Uriarte wrote:
Dear All,
The clients.txt file of the latest Rserve package, by Simon
Urbanek, says, regarding its R client,
(...) a simple R client, i.e. it allows you to connect to Rserve
On 4/9/07, Paul Gilbert [EMAIL PROTECTED] wrote:
Matthew Keller wrote:
Hi Ramon,
I've been interested in responses to your question. I have what I
think is a similar issue - I have a very large simulation script and
would like to be able to modularize it by having a main script that
Dear Matthew,
On 4/9/07, Matthew Keller [EMAIL PROTECTED] wrote:
Hi Ramon,
I've been interested in responses to your question. I have what I
think is a similar issue - I have a very large simulation script and
would like to be able to modularize it by having a main script that
calls lots of
On 4/9/07, Gregory Warnes [EMAIL PROTECTED] wrote:
You may find it easier to use NetWorkSpaces for R (see http://nws-
r.sourceforge.net/), which provides a simple mechanism for sending
tasks to worker R processes and collect the results back when done.
-G
Thanks, Greg. Yes, I am actually
Dear All,
The clients.txt file of the latest Rserve package, by Simon Urbanek,
says, regarding its R client,
(...) a simple R client, i.e. it allows you to connect to Rserve from
R itself. It is very simple and limited, because Rserve was not
primarily meant for R-to-R communication (there are
Hi
I am using Rserve for R2.3.1.
every time after I load Biobase library, a new Graphics window frame pops
up. Could any onw know how can avoid it.
Best
Saeede
class testReserve {
public static void main(String[] args) {
RServeConnection rsCon = null;
Has anyone done anything on a Python client for Rserve?
Simon Urbanek (Rserve dev) tells me he heard of some people working on
it a couple of years ago but nothing came of it. If anyone has done
anything, or might find it interesting, please get in touch with me.
I know there's also the
I have successfully installed Rserv (http://stats.math.uni-augsburg.de/Rserve)
on Mac OS, but I have trouble on two different linux platforms.
R CMD INSTALL Rserve_0.3-10.tar.gz
fails with this message
** libs
gcc -g -O2 -I/usr/local/include -L/usr/local/lib Rserv.c -o Rserve \
Need to install R with the shared libraries (it's a config option).
Paul Shannon [EMAIL PROTECTED] writes:
I have successfully installed Rserv (http://stats.math.uni-augsburg.de/Rserve)
on Mac OS, but I have trouble on two different linux platforms.
R CMD INSTALL Rserve_0.3-10.tar.gz
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