Dear All:
I have a question on using coxph for multiple genes:
I have written code to loop through all 22283 genes in the Hgu-133A and
apply coxph on survival data.
However, I don't know how to work with the result for each gene:
Sent: Tuesday, January 17, 2006 7:47 PM
Subject: [R] help with parsing multiple coxph() results
Dear All:
I have a question on using coxph for multiple genes:
I have written code to loop through all 22283 genes in the Hgu-133A
and
apply coxph on survival data.
However, I don't know how
Thanks for your reply, but I am not sure if I understand your reply right:
are you saying the geneid in your post is a vector of all 22283 genes? I
want to do cox fit to each and everyone of the 22283 genes and need a way to
summarize it -- to do that, I need to know how to parse the result for
data structure, like
vectors Java or Perl, etc.
Best
Hao
-Original Message-
From: Fredrik Lundgren [mailto:[EMAIL PROTECTED]
Sent: Tuesday, January 17, 2006 2:26 PM
To: Hao Liu
Cc: R-help
Subject: Re: [R] help with parsing multiple coxph() results
Hao,
I'm not sure but you have specified