Yes, I used LDheatmap just a moment... First you need to convert your
matrix (ej. your geno file) to snp.matrix usin the package "chopsticks",
web> https://bioconductor.org/packages/release/bioc/html/chopsticks.html.
This package is no in R library. You need use a sourse. Use this code>
## try
Have you looked here (found immediately by an internet search!)?
https://cran.r-project.org/web/packages/LDheatmap/vignettes/LDheatmap.pdf
Cheers,
Bert
Bert Gunter
"The trouble with having an open mind is that people keep coming along
and sticking things into it."
-- Opus (aka Berkeley
Thank you Bert,
Yes I looked a this one and I was looking for if any one has used it or not
before? My data set is different what they are showing in the paper
On Wed, Feb 3, 2016 at 4:00 PM, Bert Gunter wrote:
> Have you looked here (found immediately by an
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