Re: [R] t.test

2007-07-06 Thread Peter Dalgaard
matthew wrote: Hi, how can I solve a problem without the function t.test??? for example: x-(1,3,5,7) y-(2,4,6) t.test(x,y,alternative=less,paired=FALSE,var.equal=TRUE,conf.level=0.95) Homework? Hints: Take out your statistics textbook and look up the formulas for the two-sample t.

Re: [R] t.test

2007-07-06 Thread Bartjoosen
and do read the R-manual about how to make a vector matthew wrote: Hi, how can I solve a problem without the function t.test??? for example: x-(1,3,5,7) y-(2,4,6) t.test(x,y,alternative=less,paired=FALSE,var.equal=TRUE,conf.level=0.95) -- View this message in context:

Re: [R] t.test()

2006-11-24 Thread Robin Hankin
On 23 Nov 2006, at 13:46, Peter Dalgaard wrote: Robin Hankin [EMAIL PROTECTED] writes: Hi I have a vector x of length n. I am interested in x[1] being different from the other observations (ie x[-1]). [snip] What arguments do I need to send to t.test() to test my null? [snip]

Re: [R] t.test()

2006-11-23 Thread ONKELINX, Thierry
There is no such thing as an unpaired t-test. A t-test can be a paired, one sample or two sample t-test. Since you want to compare the sample against a given mean, you need a one sample t-test. You tried to do a two sample test. That didn't work because you need at least two observations in each

Re: [R] t.test()

2006-11-23 Thread Robin Hankin
Hello everybody thanks for your advice here. I think I'm getting tangled up. If I use Thierry's test on iid Gaussian data, the returned p-value should be uniform(0,1), right? OK, R f - function(x){t.test(x=x[-1],mu=x[1])$p.value} R hist(replicate(1000,f(rnorm(5 This is very skewed

Re: [R] t.test()

2006-11-23 Thread Peter Dalgaard
ONKELINX, Thierry [EMAIL PROTECTED] writes: There is no such thing as an unpaired t-test. A t-test can be a paired, one sample or two sample t-test. Since you want to compare the sample against a given mean, you need a one sample t-test. You tried to do a two sample test. That didn't work

Re: [R] t.test()

2006-11-23 Thread Peter Dalgaard
Robin Hankin [EMAIL PROTECTED] writes: Hi I have a vector x of length n. I am interested in x[1] being different from the other observations (ie x[-1]). My null hypothesis is that x[1] is drawn from a Gaussian distribution of the same mean as observations x[-1], which are assumed to

Re: [R] t.test()

2006-11-23 Thread Prof Brian Ripley
On Thu, 23 Nov 2006, ONKELINX, Thierry wrote: There is no such thing as an unpaired t-test. A t-test can be a paired, one sample or two sample t-test. Since you want to compare the sample against a given mean, you need a one sample t-test. You tried to do a two sample test. That didn't work

Re: [R] t.test()

2006-11-23 Thread Prof Brian Ripley
On Thu, 23 Nov 2006, Peter Dalgaard wrote: Robin Hankin [EMAIL PROTECTED] writes: Hi I have a vector x of length n. I am interested in x[1] being different from the other observations (ie x[-1]). My null hypothesis is that x[1] is drawn from a Gaussian distribution of the same mean

Re: [R] t.test()

2006-11-23 Thread Antonio, Fabio Di Narzo
23 Nov 2006 14:48:31 +0100, Peter Dalgaard [EMAIL PROTECTED]: ONKELINX, Thierry [EMAIL PROTECTED] writes: There is no such thing as an unpaired t-test. A t-test can be a paired, one sample or two sample t-test. Since you want to compare the sample against a given mean, you need a one

Re: [R] t.test()

2006-11-23 Thread Thilo Kellermann
Hi, seems as if you want to test if a single subject is a member of a population from which you have drawn a sample. This question has been addressed by Payne Jones and Crawford and collaborators. You should have a look at their articles in case that I interpreted your null-hypothesis and

Re: [R] t.test question

2006-03-06 Thread James W. MacDonald
Roth, Richard wrote: Hi, I have a data matrix of gene expression data from two groups that I would like to compare using the t-test. The data has been processed using RMA and transformed using log2. I would like to compare the two groups for each gene (N=10,000 genes) and have a result that

Re: [R] t.test using RSPerl

2005-06-14 Thread Henrik Bengtsson
This has nothing to do with RSPerl, instead it has to do what kind of object you obtain and how these are print():ed. Typing the name of an object, say, 'res', at R prompt and pressing ENTER; res is equivalent as typing print(res) This is for convenience to the user. Basically, this is

Re: [R] t.test formatting question

2004-04-16 Thread Tony Plate
as.numeric() (and its siblings) strip the names from vectors, e.g.: as.numeric(t.test(rnorm(1001))$statistic) [1] -0.6320304 hth, Tony Plate At Friday 05:14 PM 4/16/2004, christopher ciotti wrote: -BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Hello all - I'm trying to format some data where

Re: [R] t.test formatting question

2004-04-16 Thread christopher ciotti
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Tony Plate wrote: as.numeric() (and its siblings) strip the names from vectors, e.g.: as.numeric(t.test(rnorm(1001))$statistic) [1] -0.6320304 hth, Tony Plate Thanks for the quick response. - -- chris ciotti ([EMAIL PROTECTED]) PGP ID:

Re: [R] t.test formatting question

2004-04-16 Thread Chuck Cleland
How about this? t.test(x)[[1]] The result of t.test(x) is a list and statistic is the first component of that list. christopher ciotti wrote: ... I'm trying to format some data where I only need one of the values returned from a test, say a t-test in this instance. I have the following:

Re: [R] t.test formatting question

2004-04-16 Thread Chuck Cleland
Sorry, I should have checked that more closely. I see that t.test(rnorm(12))[[1]] retains the t. christopher ciotti wrote: ... I'm trying to format some data where I only need one of the values returned from a test, say a t-test in this instance. I have the following: R.version.string

Re: [R] t.test formatting question

2004-04-16 Thread Robert W. Baer, Ph.D.
How about: as.numeric(t.test(rnorm(12))[[1]]) - Original Message - From: Chuck Cleland [EMAIL PROTECTED] To: christopher ciotti [EMAIL PROTECTED] Cc: [EMAIL PROTECTED] Sent: Friday, April 16, 2004 6:25 PM Subject: Re: [R] t.test formatting question Sorry, I should have checked