Re: [R-pkg-devel] Compilation used the "non-portable flag"

That definitely makes it easy. Thanks. -Original Message- From: R-package-devel On Behalf Of Ralf Stubner Sent: Friday, May 10, 2019 4:41 PM To: r-package-devel@r-project.org Subject: Re: [R-pkg-devel] Compilation used the "non-portable flag" On 10.05.19 22:32, Goldfeld, Keith wrote: >

Re: [R-pkg-devel] Compilation used the "non-portable flag"

On 10 May 2019 at 20:32, Goldfeld, Keith wrote: | Good afternoon – | | I am submitting an update to my package ‘simstudy’, and the ran the rhub checks. I received a note from one of the four platforms (the other three passed). The Ubuntu Linux 16.04 objected to the compilation flags: | | *

Re: [R-pkg-devel] Compilation used the "non-portable flag"

On 10.05.19 22:32, Goldfeld, Keith wrote: > I am submitting an update to my package ‘simstudy’, and the ran the rhub > checks. I received a note from one of the four platforms (the other three > passed). The Ubuntu Linux 16.04 objected to the compilation flags: > > * checking compilation flags

[R-pkg-devel] Compilation used the "non-portable flag"

Good afternoon – I am submitting an update to my package ‘simstudy’, and the ran the rhub checks. I received a note from one of the four platforms (the other three passed). The Ubuntu Linux 16.04 objected to the compilation flags: * checking compilation flags used ... NOTE Compilation used the

Re: [R-pkg-devel] How to obtain intercept of intercept-only glm in Fortran?

Thanks Ivan for the tip. Are there any examples or links for me to follow through more closely? Thanks, Zhu -Original Message- From: Ivan Krylov Sent: Monday, May 6, 2019 4:14 AM To: Wang, Zhu Cc: R-package-devel@r-project.org Subject: Re: [R-pkg-devel] How to obtain intercept of

Re: [R-pkg-devel] Problem with using parallel runtime system with R

On Fri, 10 May 2019 at 17:38, Sameh M. Abdulah wrote: > > I will try to talk to my team to fork it for more investigation from your > side. Disclaimer: I'm not saying that I'll have time to have a look. Just that somebody might help if you provide more information, especially the actual code,

Re: [R-pkg-devel] Problem with using parallel runtime system with R

I meant for anyone who can help :). —Sameh Get Outlook for iOS On Fri, May 10, 2019 at 6:48 PM +0300, "Iñaki Ucar" mailto:iu...@fedoraproject.org>> wrote: On Fri, 10 May 2019 at 17:38, Sameh M. Abdulah wrote: > > I will try to talk to my team to fork it for more

Re: [R-pkg-devel] Problem with using parallel runtime system with R

I will try to talk to my team to fork it for more investigation from your side. However, this is the story. We have a C package which uses a STARPU runtime system (http://starpu.gforge.inria.fr/doc/starpu.pdf) to facility the parallelization through a set of task-based parallel algorithms.

Re: [R-pkg-devel] R CMD check ERROR (strange to me)

On Fri, 10 May 2019 at 17:30, Dirk Eddelbuettel wrote: > > > On 10 May 2019 at 16:49, Iñaki Ucar wrote: > | On Fri, 10 May 2019 at 15:42, Wang, Zhu wrote: > | > > | > 00install.out > | > > | > ** testing if installed package can be loaded from temporary location > | > ** checking absolute paths

Re: [R-pkg-devel] R CMD check ERROR (strange to me)

On 10 May 2019 at 16:49, Iñaki Ucar wrote: | On Fri, 10 May 2019 at 15:42, Wang, Zhu wrote: | > | > 00install.out | > | > ** testing if installed package can be loaded from temporary location | > ** checking absolute paths in shared objects and dynamic libraries | > mv: cannot move

Re: [R-pkg-devel] R CMD check ERROR (strange to me)

Thanks Iñaki for the tip that helps! Best, Zhu -Original Message- From: Iñaki Ucar Sent: Friday, May 10, 2019 9:50 AM To: Wang, Zhu Cc: Ivan Krylov ; R-package-devel@r-project.org Subject: Re: [R-pkg-devel] R CMD check ERROR (strange to me) On Fri, 10 May 2019 at 15:42, Wang, Zhu

Re: [R-pkg-devel] Problem with using parallel runtime system with R

On Fri, 10 May 2019 at 17:06, Sameh M. Abdulah wrote: > > Actually not yet. It is on Github but in a private repo. If it helps I can > fork it for public access for now. Providing the code always improves your chances of getting help. Otherwise, the information is probably too limited. Iñaki

Re: [R-pkg-devel] Problem with using parallel runtime system with R

Actually not yet. It is on Github but in a private repo. If it helps I can fork it for public access for now. Sameh Get Outlook for iOS On Fri, May 10, 2019 at 5:55 PM +0300, "Iñaki Ucar" mailto:iu...@fedoraproject.org>> wrote: On Fri, 10 May 2019 at 13:48, Sameh

Re: [R-pkg-devel] Problem with using parallel runtime system with R

On Fri, 10 May 2019 at 13:48, Sameh M. Abdulah wrote: > Hi, > > I have a C package which includes the usage of the StarPU runtime system to > allow running my code on different HW architectures. I included this to an > R-package and I found that R is using only one core and all the thread >

Re: [R-pkg-devel] "unable to verify current time" in R CMD check

On Fri, 10 May 2019 at 13:22, Juhee Lee wrote: > > Hi, I'm checking my package for CRAN. > > In fact, I already complete checking CMD in 3.5.3ver. > but for the latest ver., 3.6.0, I get '1 note' when checking CMD. > > I wonder how I can solve this note. > > > checking for future file timestamps

Re: [R-pkg-devel] Change in normal random numbers between R 3.5.3 and R 3.6.0

On 10/05/2019 8:55 a.m., Martin Maechler wrote: Ulrike Grömping on Fri, 10 May 2019 06:39:39 +0200 writes: > Mark, > I used > if (getRversion()>="3.6.0") RNGkind(sample.kind="Rounding") > And that works. Actually, using rnorm afterwards also > yields the same

Re: [R-pkg-devel] R CMD check ERROR (strange to me)

00install.out ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries mv: cannot move '/media/sf_Documents/Zwang/Rpkg/cts.Rcheck/00LOCK-cts/00new/cts' to '/media/sf_Documents/Zwang/Rpkg/cts.Rcheck/cts': File

Re: [R-pkg-devel] Change in normal random numbers between R 3.5.3 and R 3.6.0

> Ulrike Grömping > on Fri, 10 May 2019 06:39:39 +0200 writes: > Mark, > I used > if (getRversion()>="3.6.0") RNGkind(sample.kind="Rounding") > And that works. Actually, using rnorm afterwards also > yields the same random numbers. Yes, "of course",

Re: [R-pkg-devel] Change in normal random numbers between R 3.5.3 and R 3.6.0

Ulrike, RNGkind() worked on 3.4.1 and 3.6.0 but generated a warning on R 3.5.3. The message follows: checking whether package ‘nprcmanager’ can be installed ... WARNING Found the following significant warnings: Note: possible error in 'RNGkind(sample.kind = "Rounding")': unused argument

[R-pkg-devel] Problem with using parallel runtime system with R

Hi, I have a C package which includes the usage of the StarPU runtime system to allow running my code on different HW architectures. I included this to an R-package and I found that R is using only one core and all the thread initiated by the runtime system is assigned to a single core which

[R-pkg-devel] "unable to verify current time" in R CMD check

Hi, I'm checking my package for CRAN. In fact, I already complete checking CMD in 3.5.3ver. but for the latest ver., 3.6.0, I get '1 note' when checking CMD. I wonder how I can solve this note. > checking for future file timestamps ... NOTE unable to verify current time Waiting your reply,

Re: [R-pkg-devel] R CMD check ERROR (strange to me)

On Thu, 9 May 2019 23:19:46 + "Wang, Zhu" wrote: > I have encountered some strange error (see 00install.out). It seems to have been stripped by the attachment filter, and there are no compilation errors on my system. Can you include the relevant lines from 00install.out inline? -- Best