[R-pkg-devel] CMD check: Examples vs DEPENDS pkg

2023-10-17 Thread Leonard Mada via R-package-devel
Dear List members, Package Rpdf depends on package rgl. Multiple examples will call internally the rgl package to visualize the pdb molecule. When performing the CMD check: 1) Is the rgl package loaded each time anew for any of those examples? 2) If this is the case: Is it possible to load

[R-pkg-devel] 2 Return values for 2 Functions

2023-09-26 Thread Leonard Mada via R-package-devel
Dear Members, How should the return values be documented, when the help page covers 2 related functions: 1.) Variant 1: fails the checks \value{ \code{cryst1} returns a list of class \sQuote{cryst1} with the following components: \describe{ \item{abc}{a numeric vector of length 3

[R-pkg-devel] Discrepancy between R CMD check results and usethis::use_cran_comments

2023-09-26 Thread Leonard Mada via R-package-devel
Dear List-Members, There are no errors/warnings/notes when I run the check: ── R CMD check results Rpdb 2.3.3 Duration: 2m 50.1s 0 errors ✔ | 0 warnings ✔ | 0 notes ✔ However, there is a discrepancy when I run:

Re: [R-pkg-devel] Spelling of PDB in Package Description

2023-09-14 Thread Leonard Mada via R-package-devel
/R-exts.html#Marking-text Avi Sent from my iPhone On Sep 14, 2023, at 3:40 PM, Leonard Mada via R-package-devel wrote: Dear List Members, After resubmitting the updated version of the Rpdb package (2.3.1), the following Notes were generated: 1.) Spelling PDB https://win-builder.r-project.

[R-pkg-devel] Spelling of PDB in Package Description

2023-09-14 Thread Leonard Mada via R-package-devel
Dear List Members, After resubmitting the updated version of the Rpdb package (2.3.1), the following Notes were generated: 1.) Spelling PDB https://win-builder.r-project.org/incoming_pretest/Rpdb_2.3.1_20230914_173458/Windows/00check.log

Re: [R-pkg-devel] How to fix Archived Package Rpdb?

2023-09-13 Thread Leonard Mada via R-package-devel
work on my own on the package (maybe I'll have some time next month); Sincerely, Leonard On 9/12/2023 4:02 PM, Uwe Ligges wrote: On 09.09.2023 20:15, Leonard Mada via R-package-devel wrote: Thank you very much for this help. 1.) I am a little bit unsure about the LICENSE file - see below

Re: [R-pkg-devel] How to fix Archived Package Rpdb?

2023-09-10 Thread Leonard Mada via R-package-devel
' failed, running with 'rgl.useNULL = TRUE'. Googling the web was not very informative either: it mentions something about quartz device - but I am uncertain what to do. On 9/8/2023 6:59 PM, Hadley Wickham wrote: > On Fri, Sep 8, 2023 at 6:02 AM Leonard Mada via R-package-devel > wrote: &

[R-pkg-devel] How to fix Archived Package Rpdb?

2023-09-08 Thread Leonard Mada via R-package-devel
Dear Members, I would like to reanimate the archived package Rpdb: https://cran.r-project.org/web/packages/Rpdb/index.html 1.) I have tried to contact the original author by email, but got no response. 2.) New Repository on GitHub I have copied the existing code to a new repository on