date:20180204

Re: [R-pkg-devel] Fwd: Collaboration Request: h2o R Package Function Cheatsheet

2018-02-04 Thread Suzen, Mehmet

Dear Juan,

A good start. A suggestion for versioning, instead of versioning on
file names, maybe you can use git tags for release numbers. Github
will create a release bundle with you release tag.  RStudio has nice
templates for cheatsheets too [1], I think you use their template  and
possibly you could contribute there.

Best,
-m

[1] 
https://www.rstudio.com/resources/cheatsheets/how-to-contribute-a-cheatsheet/


Mehmet Süzen



On 3 February 2018 at 23:00, Juan Telleria Ruiz de Aguirre
 wrote:
> Dear R Package Developers,
>
> I have just started doing a cheatsheet for h2o R Package:
>
> https://cran.r-project.org/web/packages/h2o/index.html
>
> So if anyone is interested in contribution, I attach what I have done
> till now in Github:
>
> https://github.com/jtelleria/H2O-Cheatsheet
>
> A H2O.ai Statistical Algorithms Cheatsheet already exists, but the new
> one will be focused on R h2o package functions:
>
> https://github.com/h2oai/h2o-tutorials/blob/master/training/h2o_algos/h2o_algos_cheat_sheet_04_25_17.pdf
>
> Kind regards,
> Juan Telleria
>
> __
> R-package-devel@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-package-devel

__
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Re: [R-pkg-devel] Help with CRAN error

2018-02-04 Thread Dev Chakraborty

Thanks for your suggestion. I do a published book that describes what this
package does. Dev

On Sun, Feb 4, 2018 at 2:44 PM, Roy Mendelssohn - NOAA Federal <
roy.mendelss...@noaa.gov> wrote:

> Glad you found the solution.  I would add as an aside,  I have found a
> good vignette is worth the effort.  R docs tend to be like Unix docs,
> relatively short and terse and can be hard for someone not familiar with
> the package what all the options might do.  A good vignette allows you to
> lay out in detail how to use the package,  and to do so in context.
>
> -Roy
>
> > On Feb 4, 2018, at 11:32 AM, Dev Chakraborty 
> wrote:
> >
> > Roy,
> >
> > I don't use a knitR file, but my DESCRIPTION file had a field:
> >
> > VignetteBuilder: knitr
> >
> > Deleting this field solved the problem (i.e., got rid of that message in
> my original email)
> >
> > Thanks for all your help.
> >
> > Dev
> >
> >
> >
> > On Sun, Feb 4, 2018 at 2:05 PM, Roy Mendelssohn - NOAA Federal <
> roy.mendelss...@noaa.gov> wrote:
> > If you can't find the solution yourself,  posting the top matter of your
> vignette file would also help.
> >
> > -Roy
> >
> > > On Feb 4, 2018, at 10:54 AM, Joshua Ulrich 
> wrote:
> > >
> > > On Sun, Feb 4, 2018 at 12:47 PM, Dev Chakraborty 
> wrote:
> > >> Dear All,
> > >>
> > >> I get the following message on running R CMD check -- as - cran:
> > >>
> > >> Package has a VignetteBuilder field but no prebuilt vignette index.
> > >>
> > >> I do not know how to fix this. Any help will be appreciated.
> > >>
> > > I don't know how to fix it either.  That said, often a great first
> > > step is to search for the error.  A Google search for, "Package has a
> > > VignetteBuilder field but no prebuilt vignette index.", which points
> > > to: https://stackoverflow.com/q/30976308.
> > >
> > > And a Google search "VignetteBuilder" has several promising "how to"
> > > results, and there is a "Non-Sweave Vignettes" section of Writing R
> > > Extensions:
> > > https://cran.r-project.org/doc/manuals/r-release/R-exts.
> html#Non_002dSweave-vignettes.
> > >
> > > It will be easier for others to help you if you can do some
> > > investigation on your own and come back with more specifics.
> > >
> > >> Sincerely,
> > >>
> > >> Dev
> > >>
> > >>
> > >> --
> > >> Dev Chakraborty, PhD
> > >> Professor of Radiology retired
> > >>
> > >>[[alternative HTML version deleted]]
> > >>
> > >> __
> > >> R-package-devel@r-project.org mailing list
> > >> https://stat.ethz.ch/mailman/listinfo/r-package-devel
> > >
> > >
> > >
> > > --
> > > Joshua Ulrich  |  about.me/joshuaulrich
> > > FOSS Trading  |  www.fosstrading.com
> > > R/Finance 2018 | www.rinfinance.com
> > >
> > > __
> > > R-package-devel@r-project.org mailing list
> > > https://stat.ethz.ch/mailman/listinfo/r-package-devel
> >
> > **
> > "The contents of this message do not reflect any position of the U.S.
> Government or NOAA."
> > **
> > Roy Mendelssohn
> > Supervisory Operations Research Analyst
> > NOAA/NMFS
> > Environmental Research Division
> > Southwest Fisheries Science Center
> > ***Note new street address***
> > 110 McAllister Way
> > Santa Cruz, CA 95060
> > Phone: (831)-420-3666
> > Fax: (831) 420-3980
> > e-mail: roy.mendelss...@noaa.gov www: http://www.pfeg.noaa.gov/
> >
> > "Old age and treachery will overcome youth and skill."
> > "From those who have been given much, much will be expected"
> > "the arc of the moral universe is long, but it bends toward justice"
> -MLK Jr.
> >
> >
> >
> >
> > --
> > Dev Chakraborty, PhD
> > Professor of Radiology retired
> > CEO, ExpertCAD Analytics LLC
> > 412-480-7318 (cell)
> > ‭(412) 427-5085‬ (alt. cell)
> > 412-349-5305 (land line)
> >
> > Book website:
> > https://www.crcpress.com/9781482214840
> > Online supplementary material website:
> > https://bitbucket.org/dpc10ster/onlinebookk21778
> > CAD Project website:
> > www.expertcadanalytics.com
> > JAFROC website
> > www.devchakraborty.com
>
> **
> "The contents of this message do not reflect any position of the U.S.
> Government or NOAA."
> **
> Roy Mendelssohn
> Supervisory Operations Research Analyst
> NOAA/NMFS
> Environmental Research Division
> Southwest Fisheries Science Center
> ***Note new street address***
> 110 McAllister Way
> Santa Cruz, CA 95060
> Phone: (831)-420-3666
> Fax: (831) 420-3980
> e-mail: roy.mendelss...@noaa.gov www: http://www.pfeg.noaa.gov/
>
> "Old age and treachery will overcome youth and skill."
> "From those who have been given much, much will be expected"
> "the arc of the moral universe is long, but it bends toward justice" -MLK
> Jr.
>
>


-- 
Dev Chakraborty, PhD
Professor of Radiology retired
CEO, ExpertCAD Analytics LLC
412-480-7318 (cell)
‭(412) 427-5085‬ (alt. cell)
412-349-5305 (land line)

*Book

Re: [R-pkg-devel] Help with CRAN error

2018-02-04 Thread Roy Mendelssohn - NOAA Federal

Glad you found the solution.  I would add as an aside,  I have found a good 
vignette is worth the effort.  R docs tend to be like Unix docs,  relatively 
short and terse and can be hard for someone not familiar with the package what 
all the options might do.  A good vignette allows you to lay out in detail how 
to use the package,  and to do so in context. 

-Roy

> On Feb 4, 2018, at 11:32 AM, Dev Chakraborty  wrote:
> 
> Roy,
> 
> I don't use a knitR file, but my DESCRIPTION file had a field:
> 
> VignetteBuilder: knitr
> 
> Deleting this field solved the problem (i.e., got rid of that message in my 
> original email)
> 
> Thanks for all your help.
> 
> Dev
> 
>  
> 
> On Sun, Feb 4, 2018 at 2:05 PM, Roy Mendelssohn - NOAA Federal 
>  wrote:
> If you can't find the solution yourself,  posting the top matter of your 
> vignette file would also help.
> 
> -Roy
> 
> > On Feb 4, 2018, at 10:54 AM, Joshua Ulrich  wrote:
> >
> > On Sun, Feb 4, 2018 at 12:47 PM, Dev Chakraborty  
> > wrote:
> >> Dear All,
> >>
> >> I get the following message on running R CMD check -- as - cran:
> >>
> >> Package has a VignetteBuilder field but no prebuilt vignette index.
> >>
> >> I do not know how to fix this. Any help will be appreciated.
> >>
> > I don't know how to fix it either.  That said, often a great first
> > step is to search for the error.  A Google search for, "Package has a
> > VignetteBuilder field but no prebuilt vignette index.", which points
> > to: https://stackoverflow.com/q/30976308.
> >
> > And a Google search "VignetteBuilder" has several promising "how to"
> > results, and there is a "Non-Sweave Vignettes" section of Writing R
> > Extensions:
> > https://cran.r-project.org/doc/manuals/r-release/R-exts.html#Non_002dSweave-vignettes.
> >
> > It will be easier for others to help you if you can do some
> > investigation on your own and come back with more specifics.
> >
> >> Sincerely,
> >>
> >> Dev
> >>
> >>
> >> --
> >> Dev Chakraborty, PhD
> >> Professor of Radiology retired
> >>
> >>[[alternative HTML version deleted]]
> >>
> >> __
> >> R-package-devel@r-project.org mailing list
> >> https://stat.ethz.ch/mailman/listinfo/r-package-devel
> >
> >
> >
> > --
> > Joshua Ulrich  |  about.me/joshuaulrich
> > FOSS Trading  |  www.fosstrading.com
> > R/Finance 2018 | www.rinfinance.com
> >
> > __
> > R-package-devel@r-project.org mailing list
> > https://stat.ethz.ch/mailman/listinfo/r-package-devel
> 
> **
> "The contents of this message do not reflect any position of the U.S. 
> Government or NOAA."
> **
> Roy Mendelssohn
> Supervisory Operations Research Analyst
> NOAA/NMFS
> Environmental Research Division
> Southwest Fisheries Science Center
> ***Note new street address***
> 110 McAllister Way
> Santa Cruz, CA 95060
> Phone: (831)-420-3666
> Fax: (831) 420-3980
> e-mail: roy.mendelss...@noaa.gov www: http://www.pfeg.noaa.gov/
> 
> "Old age and treachery will overcome youth and skill."
> "From those who have been given much, much will be expected"
> "the arc of the moral universe is long, but it bends toward justice" -MLK Jr.
> 
> 
> 
> 
> -- 
> Dev Chakraborty, PhD
> Professor of Radiology retired
> CEO, ExpertCAD Analytics LLC
> 412-480-7318 (cell)
> ‭(412) 427-5085‬ (alt. cell)
> 412-349-5305 (land line)
> 
> Book website:
> https://www.crcpress.com/9781482214840
> Online supplementary material website:
> https://bitbucket.org/dpc10ster/onlinebookk21778
> CAD Project website:
> www.expertcadanalytics.com
> JAFROC website
> www.devchakraborty.com

**
"The contents of this message do not reflect any position of the U.S. 
Government or NOAA."
**
Roy Mendelssohn
Supervisory Operations Research Analyst
NOAA/NMFS
Environmental Research Division
Southwest Fisheries Science Center
***Note new street address***
110 McAllister Way
Santa Cruz, CA 95060
Phone: (831)-420-3666
Fax: (831) 420-3980
e-mail: roy.mendelss...@noaa.gov www: http://www.pfeg.noaa.gov/

"Old age and treachery will overcome youth and skill."
"From those who have been given much, much will be expected" 
"the arc of the moral universe is long, but it bends toward justice" -MLK Jr.

__
R-package-devel@r-project.org mailing list
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Re: [R-pkg-devel] Help with CRAN error

2018-02-04 Thread Dev Chakraborty

Roy,

I don't use a knitR file, but my DESCRIPTION file had a field:

VignetteBuilder: knitr

Deleting this field solved the problem (i.e., got rid of that message in my
original email)

Thanks for all your help.

Dev



On Sun, Feb 4, 2018 at 2:05 PM, Roy Mendelssohn - NOAA Federal <
roy.mendelss...@noaa.gov> wrote:

> If you can't find the solution yourself,  posting the top matter of your
> vignette file would also help.
>
> -Roy
>
> > On Feb 4, 2018, at 10:54 AM, Joshua Ulrich 
> wrote:
> >
> > On Sun, Feb 4, 2018 at 12:47 PM, Dev Chakraborty 
> wrote:
> >> Dear All,
> >>
> >> I get the following message on running R CMD check -- as - cran:
> >>
> >> Package has a VignetteBuilder field but no prebuilt vignette index.
> >>
> >> I do not know how to fix this. Any help will be appreciated.
> >>
> > I don't know how to fix it either.  That said, often a great first
> > step is to search for the error.  A Google search for, "Package has a
> > VignetteBuilder field but no prebuilt vignette index.", which points
> > to: https://stackoverflow.com/q/30976308.
> >
> > And a Google search "VignetteBuilder" has several promising "how to"
> > results, and there is a "Non-Sweave Vignettes" section of Writing R
> > Extensions:
> > https://cran.r-project.org/doc/manuals/r-release/R-exts.
> html#Non_002dSweave-vignettes.
> >
> > It will be easier for others to help you if you can do some
> > investigation on your own and come back with more specifics.
> >
> >> Sincerely,
> >>
> >> Dev
> >>
> >>
> >> --
> >> Dev Chakraborty, PhD
> >> Professor of Radiology retired
> >>
> >>[[alternative HTML version deleted]]
> >>
> >> __
> >> R-package-devel@r-project.org mailing list
> >> https://stat.ethz.ch/mailman/listinfo/r-package-devel
> >
> >
> >
> > --
> > Joshua Ulrich  |  about.me/joshuaulrich
> > FOSS Trading  |  www.fosstrading.com
> > R/Finance 2018 | www.rinfinance.com
> >
> > __
> > R-package-devel@r-project.org mailing list
> > https://stat.ethz.ch/mailman/listinfo/r-package-devel
>
> **
> "The contents of this message do not reflect any position of the U.S.
> Government or NOAA."
> **
> Roy Mendelssohn
> Supervisory Operations Research Analyst
> NOAA/NMFS
> Environmental Research Division
> Southwest Fisheries Science Center
> ***Note new street address***
> 110 McAllister Way
> Santa Cruz, CA 95060
> Phone: (831)-420-3666
> Fax: (831) 420-3980
> e-mail: roy.mendelss...@noaa.gov www: http://www.pfeg.noaa.gov/
>
> "Old age and treachery will overcome youth and skill."
> "From those who have been given much, much will be expected"
> "the arc of the moral universe is long, but it bends toward justice" -MLK
> Jr.
>
>


-- 
Dev Chakraborty, PhD
Professor of Radiology retired
CEO, ExpertCAD Analytics LLC
412-480-7318 (cell)
‭(412) 427-5085‬ (alt. cell)
412-349-5305 (land line)

*Book website:*
https://www.crcpress.com/9781482214840
*Online supplementary material website:*
https://bitbucket.org/dpc10ster/onlinebookk21778

*CAD Project website:*
www.expertcadanalytics.com
*JAFROC website*
www.devchakraborty.com

[[alternative HTML version deleted]]

__
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Re: [R-pkg-devel] Help with CRAN error

2018-02-04 Thread Roy Mendelssohn - NOAA Federal

If you can't find the solution yourself,  posting the top matter of your 
vignette file would also help.

-Roy

> On Feb 4, 2018, at 10:54 AM, Joshua Ulrich  wrote:
> 
> On Sun, Feb 4, 2018 at 12:47 PM, Dev Chakraborty  wrote:
>> Dear All,
>> 
>> I get the following message on running R CMD check -- as - cran:
>> 
>> Package has a VignetteBuilder field but no prebuilt vignette index.
>> 
>> I do not know how to fix this. Any help will be appreciated.
>> 
> I don't know how to fix it either.  That said, often a great first
> step is to search for the error.  A Google search for, "Package has a
> VignetteBuilder field but no prebuilt vignette index.", which points
> to: https://stackoverflow.com/q/30976308.
> 
> And a Google search "VignetteBuilder" has several promising "how to"
> results, and there is a "Non-Sweave Vignettes" section of Writing R
> Extensions:
> https://cran.r-project.org/doc/manuals/r-release/R-exts.html#Non_002dSweave-vignettes.
> 
> It will be easier for others to help you if you can do some
> investigation on your own and come back with more specifics.
> 
>> Sincerely,
>> 
>> Dev
>> 
>> 
>> --
>> Dev Chakraborty, PhD
>> Professor of Radiology retired
>> 
>>[[alternative HTML version deleted]]
>> 
>> __
>> R-package-devel@r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/r-package-devel
> 
> 
> 
> -- 
> Joshua Ulrich  |  about.me/joshuaulrich
> FOSS Trading  |  www.fosstrading.com
> R/Finance 2018 | www.rinfinance.com
> 
> __
> R-package-devel@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-package-devel

**
"The contents of this message do not reflect any position of the U.S. 
Government or NOAA."
**
Roy Mendelssohn
Supervisory Operations Research Analyst
NOAA/NMFS
Environmental Research Division
Southwest Fisheries Science Center
***Note new street address***
110 McAllister Way
Santa Cruz, CA 95060
Phone: (831)-420-3666
Fax: (831) 420-3980
e-mail: roy.mendelss...@noaa.gov www: http://www.pfeg.noaa.gov/

"Old age and treachery will overcome youth and skill."
"From those who have been given much, much will be expected" 
"the arc of the moral universe is long, but it bends toward justice" -MLK Jr.

__
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Re: [R-pkg-devel] Help with CRAN error

2018-02-04 Thread Joshua Ulrich

On Sun, Feb 4, 2018 at 12:47 PM, Dev Chakraborty  wrote:
> Dear All,
>
> I get the following message on running R CMD check -- as - cran:
>
> Package has a VignetteBuilder field but no prebuilt vignette index.
>
> I do not know how to fix this. Any help will be appreciated.
>
I don't know how to fix it either.  That said, often a great first
step is to search for the error.  A Google search for, "Package has a
VignetteBuilder field but no prebuilt vignette index.", which points
to: https://stackoverflow.com/q/30976308.

And a Google search "VignetteBuilder" has several promising "how to"
results, and there is a "Non-Sweave Vignettes" section of Writing R
Extensions:
https://cran.r-project.org/doc/manuals/r-release/R-exts.html#Non_002dSweave-vignettes.

It will be easier for others to help you if you can do some
investigation on your own and come back with more specifics.

> Sincerely,
>
> Dev
>
>
> --
> Dev Chakraborty, PhD
> Professor of Radiology retired
>
> [[alternative HTML version deleted]]
>
> __
> R-package-devel@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-package-devel



-- 
Joshua Ulrich  |  about.me/joshuaulrich
FOSS Trading  |  www.fosstrading.com
R/Finance 2018 | www.rinfinance.com

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[R-pkg-devel] Help with CRAN error

2018-02-04 Thread Dev Chakraborty

Dear All,

I get the following message on running R CMD check -- as - cran:

Package has a VignetteBuilder field but no prebuilt vignette index.

I do not know how to fix this. Any help will be appreciated.

Sincerely,

Dev


-- 
Dev Chakraborty, PhD
Professor of Radiology retired

[[alternative HTML version deleted]]

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Re: [R-pkg-devel] fftw linking

2018-02-04 Thread Dirk Eddelbuettel


On 4 February 2018 at 15:38, Denis Rastegaev wrote:
| I try to upload my package on CRAN but the package
| does not pass the incoming checks. How to link external
| compiler with fftw?

CRAN is a treasure trove with over 12k packages. Learn to search it.

For example, package fftwtools has this line in its src/Makevars.win:
   PKG_LIBS= -lfftw3 -lm  
See https://github.com/cran/fftwtools/blob/master/src/Makevars.win#L12
It appears to be producing Windows binaries based on its CRAN page.

For example package fftw has a 'SystemRequirements: fftw3' but also provides
Windows binaries.  Its src/Makrvars.win has
   PKG_LIBS=-L$(LIB_FFTW)/lib -l fftw3
so it seems to use the (documented !!) facility of using a _predefined set_
of external libraries via an environment variable.  For what it is worth, I
do the same for the GSL.

Dirk

-- 
http://dirk.eddelbuettel.com | @eddelbuettel | e...@debian.org

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[R-pkg-devel] fftw linking

2018-02-04 Thread Denis Rastegaev

Hello everyone!
I try to upload my package on CRAN but the package
does not pass the incoming checks. How to link external
compiler with fftw? My package on github:
https://github.com/drastega/specklestar

Installation log:

* installing *source* package 'specklestar' ...
** libs

*** arch - i386
d:/Compiler/gcc-4.9.3/mingw_32/bin/g++
-I"D:/RCompile/recent/R/include" -DNDEBUG
-I"d:/RCompile/CRANpkg/lib/3.5/Rcpp/include"
-I"d:/Compiler/gcc-4.9.3/local330/include" -pedantic -O2 -Wall
-mtune=core2 -c RcppExports.cpp -o RcppExports.o
d:/Compiler/gcc-4.9.3/mingw_32/bin/g++
-I"D:/RCompile/recent/R/include" -DNDEBUG
-I"d:/RCompile/CRANpkg/lib/3.5/Rcpp/include"
-I"d:/Compiler/gcc-4.9.3/local330/include" -pedantic -O2 -Wall
-mtune=core2 -c image_helper.cpp -o image_helper.o
d:/Compiler/gcc-4.9.3/mingw_32/bin/g++
-I"D:/RCompile/recent/R/include" -DNDEBUG
-I"d:/RCompile/CRANpkg/lib/3.5/Rcpp/include"
-I"d:/Compiler/gcc-4.9.3/local330/include" -pedantic -O2 -Wall
-mtune=core2 -c middle_frame.cpp -o middle_frame.o
d:/Compiler/gcc-4.9.3/mingw_32/bin/g++
-I"D:/RCompile/recent/R/include" -DNDEBUG
-I"d:/RCompile/CRANpkg/lib/3.5/Rcpp/include"
-I"d:/Compiler/gcc-4.9.3/local330/include" -pedantic -O2 -Wall
-mtune=core2 -c ps.cpp -o ps.o
d:/Compiler/gcc-4.9.3/mingw_32/bin/g++
-I"D:/RCompile/recent/R/include" -DNDEBUG
-I"d:/RCompile/CRANpkg/lib/3.5/Rcpp/include"
-I"d:/Compiler/gcc-4.9.3/local330/include" -pedantic -O2 -Wall
-mtune=core2 -c ps_diff.cpp -o ps_diff.o
d:/Compiler/gcc-4.9.3/mingw_32/bin/g++
-I"D:/RCompile/recent/R/include" -DNDEBUG
-I"d:/RCompile/CRANpkg/lib/3.5/Rcpp/include"
-I"d:/Compiler/gcc-4.9.3/local330/include" -pedantic -O2 -Wall
-mtune=core2 -c speckle_acf.cpp -o speckle_acf.o
d:/Compiler/gcc-4.9.3/mingw_32/bin/g++
-I"D:/RCompile/recent/R/include" -DNDEBUG
-I"d:/RCompile/CRANpkg/lib/3.5/Rcpp/include"
-I"d:/Compiler/gcc-4.9.3/local330/include" -pedantic -O2 -Wall
-mtune=core2 -c speckle_generator.cpp -o speckle_generator.o
d:/Compiler/gcc-4.9.3/mingw_32/bin/g++
-I"D:/RCompile/recent/R/include" -DNDEBUG
-I"d:/RCompile/CRANpkg/lib/3.5/Rcpp/include"
-I"d:/Compiler/gcc-4.9.3/local330/include" -pedantic -O2 -Wall
-mtune=core2 -c speckle_stat.cpp -o speckle_stat.o
d:/Compiler/gcc-4.9.3/mingw_32/bin/g++ -shared -s -static-libgcc -o
specklestar.dll tmp.def RcppExports.o image_helper.o middle_frame.o
ps.o ps_diff.o speckle_acf.o speckle_generator.o speckle_stat.o
-Ld:/Compiler/gcc-4.9.3/local330/lib/i386
-Ld:/Compiler/gcc-4.9.3/local330/lib -LD:/RCompile/recent/R/bin/i386
-lR
ps.o:ps.cpp:(.text+0x669): undefined reference to `fftw_malloc'
ps.o:ps.cpp:(.text+0x77d): undefined reference to `fftw_plan_dft_r2c_2d'
ps.o:ps.cpp:(.text+0x787): undefined reference to `fftw_execute'
ps.o:ps.cpp:(.text+0x78f): undefined reference to `fftw_destroy_plan'
ps.o:ps.cpp:(.text+0x7de): undefined reference to `fftw_free'
ps_diff.o:ps_diff.cpp:(.text+0x699): undefined reference to `fftw_malloc'
ps_diff.o:ps_diff.cpp:(.text+0xd27): undefined reference to
`fftw_plan_dft_r2c_2d'
ps_diff.o:ps_diff.cpp:(.text+0xd31): undefined reference to `fftw_execute'
ps_diff.o:ps_diff.cpp:(.text+0xd39): undefined reference to `fftw_destroy_plan'
ps_diff.o:ps_diff.cpp:(.text+0xda0): undefined reference to `fftw_free'
speckle_acf.o:speckle_acf.cpp:(.text+0x323): undefined reference to
`fftw_malloc'
speckle_acf.o:speckle_acf.cpp:(.text+0x349): undefined reference to
`fftw_plan_dft_c2r_2d'
speckle_acf.o:speckle_acf.cpp:(.text+0x354): undefined reference to
`fftw_execute'
speckle_acf.o:speckle_acf.cpp:(.text+0x35f): undefined reference to
`fftw_destroy_plan'
speckle_acf.o:speckle_acf.cpp:(.text+0x384): undefined reference to `fftw_free'
collect2.exe: error: ld returned 1 exit status
no DLL was created
ERROR: compilation failed for package 'specklestar'
* removing 'd:/RCompile/CRANincoming/R-devel/lib/specklestar'
In R CMD INSTALL

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