Re: [R-pkg-devel] Whack-a-mole base::assign(".ptime", proc.time(), pos = "CheckExEnv")

2019-04-30 Thread Mark Hogue
Thank you very much Peter. Your advice helped me find the error. I had not previously known where to find the package's -Ex.R file, and I didn't even realize that this was a timeout error. (The -Ex.R file was in my working directory, not the package directory.) One function did have some long

Re: [R-pkg-devel] Need help for Debian check error

2019-04-30 Thread Ivan Krylov
On Tue, 30 Apr 2019 19:53:49 + "Zhang, Lixiang" wrote: > I don't know why is that happening and how should I fix it. Thanks a > lot for your help. The e-mail from CRAN also said, >> More details are given in the directory: followed by a link scrambled by your e-mail software. When you

Re: [R-pkg-devel] Need help for Debian check error

2019-04-30 Thread Duncan Murdoch
On 30/04/2019 3:53 p.m., Zhang, Lixiang wrote: Sorry to interrupt, but I have some problems that I don't understand about the check result. It shows that it passes the check using R CMD check --as-cran. But when I submit to cran, it shows me an error on Debian: * checking whether package

Re: [R-pkg-devel] Need help for Debian check error

2019-04-30 Thread Iñaki Ucar
On Tue, 30 Apr 2019 at 22:06, Zhang, Lixiang wrote: > > Sorry to interrupt, but I have some problems that I don't understand about > the check result. It shows that it passes the check using R CMD check > --as-cran. But when I submit to cran, it shows me an error on Debian: > > * checking

[R-pkg-devel] Need help for Debian check error

2019-04-30 Thread Zhang, Lixiang
Sorry to interrupt, but I have some problems that I don't understand about the check result. It shows that it passes the check using R CMD check --as-cran. But when I submit to cran, it shows me an error on Debian: * checking whether package ‘cps’ can be installed ... [8s/8s] ERROR Installation

Re: [R-pkg-devel] parallel computing slower than sequential computing

2019-04-30 Thread Wang, Zhu
-Original Message- From: Ivan Krylov Sent: Tuesday, April 30, 2019 10:17 AM To: Wang, Zhu Cc: R-package-devel@r-project.org Subject: Re: [R-pkg-devel] parallel computing slower than sequential computing On Mon, 29 Apr 2019 23:44:42 + "Wang, Zhu" wrote: > sessionInfo() > R version

Re: [R-pkg-devel] parallel computing slower than sequential computing

2019-04-30 Thread Ivan Krylov
On Mon, 29 Apr 2019 23:44:42 + "Wang, Zhu" wrote: > sessionInfo() > R version 3.5.2 (2018-12-20) > Platform: x86_64-pc-linux-gnu (64-bit) > Running under: Ubuntu 18.04.2 LTS Which BLAS implementation do you use? One popular implementation, OpenBLAS, spawns multiple threads to do some

Re: [R-pkg-devel] Whack-a-mole base::assign(".ptime", proc.time(), pos = "CheckExEnv")

2019-04-30 Thread peter dalgaard
That line is a generic part of the timing (it records current time so that at the end you can do what amounts to "Time used:" proc.time() - .ptime). It is not likely to contain the actual error -- notice that the message just gives you a best guess of the error location and that may fail. You