Re: [R-pkg-devel] package CatDataAnalysis

2020-06-28 Thread Charles Geyer
life. As a user of packages I agree with the CRAN that > package documention should be usable on its own. > > On June 28, 2020 10:58:15 AM PDT, Charles Geyer > wrote: > >CRAN did not just ask for an expanded Description field. They > >instructed > >"Tell the u

Re: [R-pkg-devel] package CatDataAnalysis

2020-06-28 Thread Charles Geyer
in violation of law. On Sun, Jun 28, 2020 at 1:08 PM Ivan Krylov wrote: > On Sun, 28 Jun 2020 11:07:46 -0500 > Charles Geyer wrote: > > >Please note that I made Alan Agresti (with his acquiescence) the > >author of the package > > Sorry to derail this, but is it p

Re: [R-pkg-devel] package CatDataAnalysis

2020-06-28 Thread Charles Geyer
t; Max Turgeon > Assistant Professor > Department of Statistics > Department of Computer Science > University of Manitoba > maxturgeon.ca > > > -- > *From:* Charles Geyer > *Sent:* June 28, 2020 12:48:06 PM > *To:* Max Turgeon > *Cc:* R Pa

Re: [R-pkg-devel] package CatDataAnalysis

2020-06-28 Thread Charles Geyer
> Max Turgeon > Assistant Professor > Department of Statistics > Department of Computer Science > University of Manitoba > maxturgeon.ca > > > > > -- > *From:* R-package-devel on behalf

Re: [R-pkg-devel] package CatDataAnalysis

2020-06-28 Thread Charles Geyer
s that’s fine in which case you have permission, or he doesn’t and you > dodge a bullet. > > > On Mon, 29 Jun 2020 at 2:45 am, Charles Geyer > wrote: > >> Actually the wooldridge package does not seem to satisfy any of the >> specific requests CRAN asked me for. I have

Re: [R-pkg-devel] package CatDataAnalysis

2020-06-28 Thread Charles Geyer
st, > > Neal > > On Sun, Jun 28, 2020 at 9:08 AM Charles Geyer > wrote: > > > > I have a package that has the datasets for Categorical Data Analysis by > > Agresti that do not appear in the book. The whole package is a github > repo > > https:/

[R-pkg-devel] package CatDataAnalysis

2020-06-28 Thread Charles Geyer
e book is used for many courses. So this package would be very helpful as is to many students and teachers. So what to do? Is there any way to get this package on CRAN? -- Charles Geyer Professor, School of Statistics Resident Fellow, Minnesota Center for Philosophy of Science Uni

Re: [R-pkg-devel] check --as-cran error on Rd file

2020-03-13 Thread Charles Geyer
t; head(alberta) ind pa ma [1,] 58 11 12 [2,] 100 39 40 [3,] 101 39 40 [4,] 103 39 40 [5,] 107 39 100 [6,] 113 17 18 Oh. I see. I need to change "alberta" (with no "data") to "data(alberta)" in the usage section and in the examples section. Then the probl

[R-pkg-devel] check --as-cran error on Rd file

2020-03-11 Thread Charles Geyer
is AFAICS what Section 2.1.2 of Writing R Extensions (R-devel version) says it should be. So what is this warning about? -- Charles Geyer Professor, School of Statistics Resident Fellow, Minnesota Center for Philosophy of Science University of Minnesota char...@stat.umn.edu [[altern

Re: [R-pkg-devel] registering native routines

2019-02-17 Thread Charles Geyer
don't (except for the aforementioned fooRegister) and I was suddenly worried about them. On Sat, Feb 16, 2019 at 9:41 PM Avraham Adler wrote: > > https://stat.ethz.ch/pipermail/r-devel/2017-February/073755.html > > On Sat, Feb 16, 2019 at 3:22 PM Charles Geyer wrote: > > &g

[R-pkg-devel] registering native routines

2019-02-16 Thread Charles Geyer
confusing and don't want to provide erroneous info. These packages are toy packages to introduce the class to R packages. I don't actually want to put them on CRAN. -- Charles Geyer Professor, School of Statistics Resident Fellow, Minnesota Center for Philosophy of Science University of

Re: [R-pkg-devel] R_registerRoutines, R_useDynamicSymbols

2018-08-13 Thread Charles Geyer
There are several other things to do. You might find the toy package fooRegister I use for teaching helpful. https://github.com/cjgeyer/foo/tree/master/package/fooRegister -- Charles Geyer Professor, School of Statistics Resident Fellow, Minnesota Center for Philosophy of Science University of

Re: [R-pkg-devel] Determine subset from glm object

2018-07-08 Thread Charles Geyer
t would have NA's removed or whatever na.action says to do. But that seems redundant. On Sun, Jul 8, 2018, 1:04 PM Charles Geyer wrote: > > I think your second option sounds better because this is all happening inside > one function I'm writing so users won't be able mess

Re: [R-pkg-devel] Determine subset from glm object

2018-07-08 Thread Charles Geyer
I think your second option sounds better because this is all happening inside one function I'm writing so users won't be able mess with the glm object. Many thanks. On Sun, Jul 8, 2018, 12:10 PM Duncan Murdoch wrote: > On 08/07/2018 11:48 AM, Charles Geyer wrote: > > I need

[R-pkg-devel] Determine subset from glm object

2018-07-08 Thread Charles Geyer
r way? One more guaranteed to be correct in the future? -- Charles Geyer Professor, School of Statistics Resident Fellow, Minnesota Center for Philosophy of Science University of Minnesota char...@stat.umn.edu [[alternative HTML version de

Re: [R-pkg-devel] CRAN upload and prechecking confusion (Johannes Graumann)

2017-08-25 Thread Charles Geyer
You can precompute long running things in vignettes. See CRAN package mcmc for examples that do this reproducibly. -- Charles Geyer Professor, School of Statistics Resident Fellow, Minnesota Center for Philosophy of Science University of Minnesota char...@stat.umn.edu

Re: [R-pkg-devel] Problems with Notes for Package IncDTW

2017-06-23 Thread Charles Geyer
I modified a toy package I use for teaching to do the registration right (to serve as an example). See https://github.com/cjgeyer/foo/tree/master/package where packages foo and fooRegister do the same thing except for registration. Diffing them shows what is needed. -- Charles Geyer Professor

Re: [R-pkg-devel] R CMD check crash for Ubuntu 14.04 R-3.2.1 only

2015-07-04 Thread Charles Geyer
Agreed on divide-and-conquer. There is no other way. Valgridn et al may > move > some code to registers for subtle changes. > > On 4 July 2015 at 10:20, Charles Geyer wrote: > | I should add a more direct question. When a crash occurs ONLY when > running R > | CMD check, how do

Re: [R-pkg-devel] R CMD check crash for Ubuntu 14.04 R-3.2.1 only

2015-07-04 Thread Charles Geyer
Sat, Jul 4, 2015 at 10:15 AM, Charles Geyer wrote: > The diff for bar.Rout is OK. The solution is the same (the two matrices > have the same rows and so determine the same convex polyhedron). Why it > picks different orders of rows on different machines, I have no idea. > > I als

Re: [R-pkg-devel] R CMD check crash for Ubuntu 14.04 R-3.2.1 only

2015-07-04 Thread Charles Geyer
seem to > have a Heisenbug (https://en.wikipedia.org/wiki/Heisenbug) > > Sorry I cannot offer more help. > > Dirk > > -- > http://dirk.eddelbuettel.com | @eddelbuettel | e...@debian.org > -- Charles Geyer Professor, School of Statistics University of Minnesota char...@stat.umn.edu [[alternative HTML version deleted]] __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel

Re: [R-pkg-devel] R CMD check crash for Ubuntu 14.04 R-3.2.1 only

2015-07-03 Thread Charles Geyer
valgrind reports no errors On Fri, Jul 3, 2015 at 4:44 PM, Gábor Csárdi wrote: > On Fri, Jul 3, 2015 at 11:40 PM, Charles Geyer > wrote: > [...] > >> * run the file that causes the crash with R CMD check by itself, >> it works, no crash >> * run R CMD

[R-pkg-devel] R CMD check crash for Ubuntu 14.04 R-3.2.1 only

2015-07-03 Thread Charles Geyer
no debugging info. What do I do now? If it helps the tarball in question is http://users.stat.umn.edu/~geyer/rcdd_1.1-9.tar.gz -- Charles Geyer Professor, School of Statistics University of Minnesota char...@stat.umn.edu [[alternative HTML version deleted

Re: [R-pkg-devel] Managing RNG in C code

2015-06-05 Thread Charles Geyer
om R to C and back? > > Alternatively, is there a hack to get access by force to the private RNG > in R from C and set its seed? This way, I could call the C code only 1 time > and run the 1000 trajectories within C, updating the seed in R for each new > trajectory (this is what I did