Re: [R-pkg-devel] checking for detritus in the temp directory ... NOTE 'RtmpvRaBK1_copy'

2021-01-14 Thread Joseph Thorley 
Thanks Duncan

Yes the problem was that a dir was being created in the sims.Rmd vignette that 
was not being removed.

Thanks for helping identify the issue so quickly

Joe

> On Jan 14, 2021, at 07:28, Duncan Murdoch  wrote:
> 
> On 14/01/2021 10:22 a.m., Joseph Thorley wrote:
>> Hi All
>> I’m getting the following Note for CRAN r-devel-linux-x86_64-debian-gcc
>> * checking for detritus in the temp directory ... NOTE
>> Found the following files/directories:
>>   ‘RtmpvRaBK1_copy’
>>  but not on R-hub or any of of the other versions/operating systems tested:
>>  • OSX (local) - release
>>  • OSX (actions) - release
>>  • Ubuntu (actions) - 3.6, oldrel, release and devel
>>  • Windows (actions) - release
>>  • Windows (winbuilder) - devel
>> The package is https://github.com/poissonconsulting/sims
>> The file names in other posts discussing similar issues are different in 
>> structure suggesting different mechanisms
>> https://www.mail-archive.com/r-package-devel@r-project.org/msg06089.html
>> https://stackoverflow.com/questions/62456137/r-cran-check-detritus-in-temp-directory
>> Any help on how to debug appreciated
> 
> I did a search for "_copy" on your Github source, and I see a dir containing 
> that being created in a test (but apparently removed afterwards), and also 
> being created in the sims.Rmd vignette without being removed (though a file 
> in the directory is removed).
> 
> No idea why you see the NOTE only on some platforms.
> 
> Duncan Murdoch
> 
> 
>> Thanks
>> Joe
>> Joe Thorley PhD, RPBio
>> Computational Biologist
>> Poisson Consulting Ltd.
>> 4216 Shasheen Road
>> Nelson, BC
>> V1L 6X1, Canada
>> Tel: +1 250 551 2194
>> Email: j...@poissonconsulting.ca
>> Web: www.poissonconsulting.ca
>>  [[alternative HTML version deleted]]
>> __
>> R-package-devel@r-project.org  mailing 
>> list
>> https://stat.ethz.ch/mailman/listinfo/r-package-devel 
>> 

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Re: [R-pkg-devel] checking for detritus in the temp directory ... NOTE 'RtmpvRaBK1_copy'

2021-01-14 Thread Duncan Murdoch 

On 14/01/2021 10:22 a.m., Joseph Thorley wrote:

Hi All

I’m getting the following Note for CRAN r-devel-linux-x86_64-debian-gcc
* checking for detritus in the temp directory ... NOTE
Found the following files/directories:
   ‘RtmpvRaBK1_copy’
  but not on R-hub or any of of the other versions/operating systems tested:

• OSX (local) - release
• OSX (actions) - release
• Ubuntu (actions) - 3.6, oldrel, release and devel
• Windows (actions) - release
• Windows (winbuilder) - devel


The package is https://github.com/poissonconsulting/sims

The file names in other posts discussing similar issues are different in 
structure suggesting different mechanisms

https://www.mail-archive.com/r-package-devel@r-project.org/msg06089.html

https://stackoverflow.com/questions/62456137/r-cran-check-detritus-in-temp-directory

Any help on how to debug appreciated


I did a search for "_copy" on your Github source, and I see a dir 
containing that being created in a test (but apparently removed 
afterwards), and also being created in the sims.Rmd vignette without 
being removed (though a file in the directory is removed).


No idea why you see the NOTE only on some platforms.

Duncan Murdoch




Thanks

Joe

Joe Thorley PhD, RPBio
Computational Biologist
Poisson Consulting Ltd.
4216 Shasheen Road
Nelson, BC
V1L 6X1, Canada
Tel: +1 250 551 2194
Email: j...@poissonconsulting.ca
Web: www.poissonconsulting.ca





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[R-pkg-devel] checking for detritus in the temp directory ... NOTE 'RtmpvRaBK1_copy'

2021-01-14 Thread Joseph Thorley 
Hi All

I’m getting the following Note for CRAN r-devel-linux-x86_64-debian-gcc
* checking for detritus in the temp directory ... NOTE
Found the following files/directories:
  ‘RtmpvRaBK1_copy’
 but not on R-hub or any of of the other versions/operating systems tested:

• OSX (local) - release
• OSX (actions) - release
• Ubuntu (actions) - 3.6, oldrel, release and devel
• Windows (actions) - release
• Windows (winbuilder) - devel


The package is https://github.com/poissonconsulting/sims

The file names in other posts discussing similar issues are different in 
structure suggesting different mechanisms

https://www.mail-archive.com/r-package-devel@r-project.org/msg06089.html

https://stackoverflow.com/questions/62456137/r-cran-check-detritus-in-temp-directory

Any help on how to debug appreciated

Thanks

Joe

Joe Thorley PhD, RPBio
Computational Biologist
Poisson Consulting Ltd.
4216 Shasheen Road
Nelson, BC
V1L 6X1, Canada
Tel: +1 250 551 2194
Email: j...@poissonconsulting.ca
Web: www.poissonconsulting.ca





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