[R-pkg-devel] Packages required but not available

2021-09-11 Thread Danielle Maeser via R-package-devel
Hello, I received the following output from my package, oncoPredict. However, I don't understand how to correct this error. I've tested the advice here: https://stackoverflow.com/questions/14358814/error-in-r-cmd-check-packages-required-but-not-available without success. Any thoughts as to how

Re: [R-pkg-devel] Packages required but not available

2021-09-11 Thread Danielle Maeser via R-package-devel
Hi David, Yes. I did recently upgrade R. On Sat, Sep 11, 2021 at 4:28 PM wrote: > Danielle: > > Did you recently upgrade to R 4.1.1? > > David > > > -Original Message- > From: R-package-devel On Behalf > Of Danielle Maeser via R-package-devel > Sent: Saturday, September 11, 2021 5:10

Re: [R-pkg-devel] Packages required but not available

2021-09-11 Thread dbosak01
Reminder that you have to re-install any packages that your oncoPredict package depends on for the new R version 4.1.1. Packages are downloaded/installed to a specific R version. If you switch to another version, everything needs to be reinstalled. I always get this error after upgrading or

Re: [R-pkg-devel] Packages required but not available

2021-09-11 Thread Jeff Newmiller
This advice would apply if the errors were being generated on a computer under the package developer's control... but this looks like it is from a repo submission. That said, if the developer has installed packages not currently in BioC for R4.1.1 they may need to wait for those packages to