Re: [R-sig-eco] error message with function rda of package vegan

2012-06-11 Thread Simpson, Gavin
Feel free to send your data to me, off list. I'll take a look at what might be going on inside vegan. Gavin Sent from my HTC - Reply message - From: "Duarte Viana" Date: Mon, Jun 11, 2012 20:47 Subject: [R-sig-eco] error message with function rda of package vegan To: "Sarah Goslee" Cc

[R-sig-eco] error message with function rda of package vegan

2012-06-11 Thread Duarte Viana
Hi, Thank you for your reply. It's not easy to give you a reproducible example, because this is a very specific case (something in my data , I believe). The only way is to send the data and try yourself. If someone is willing to do that, I would be grateful. I can send the response matrix and the

Re: [R-sig-eco] error message with function rda of package vegan

2012-06-11 Thread Sarah Goslee
Hi, On Mon, Jun 11, 2012 at 12:35 PM, Duarte Viana wrote: > Hello all, > > Apologies for cross postings. > > I am running the function "rda" of the vegan library, like I did many > times without having troubles, and I get the following error message: > "Error in if (rank) { : argument is not inte

[R-sig-eco] error message with function rda of package vegan

2012-06-11 Thread Duarte Viana
Hello all, Apologies for cross postings. I am running the function "rda" of the vegan library, like I did many times without having troubles, and I get the following error message: "Error in if (rank) { : argument is not interpretable as logical". I am just testing a response matrix against a si

[R-sig-eco] cozigam

2012-06-11 Thread Mahnaz Rabbaniha
hi i try to find regression between clupeidae,with temperature,salinity and depth. the response variable is inclued many zero ( 86 from 133 observed) therefore i used this code : res <- cozigam(Clupeidae~s(temperature,salinity)+s(depth), constraint = "proportional", family = gaussian) the res