[R-sig-eco] PCNM function

2013-08-21 Thread Valerie Mucciarelli
Hello,   I am doing some spatial analysis and am attempting to use the PCNM function from the PCNM package.  I am using the most recent version of R and have loaded the packages packfor and AEM.  When I try to run the PCNM function as below: xy.d1 - dist(loc) spe.PCNM.auto - PCNM(xy.d1) I

Re: [R-sig-eco] PCNM function

2013-08-21 Thread Valerie Mucciarelli
: r-sig-ecology@r-project.org On Wed, Aug 21, 2013 at 9:19 PM, Valerie Mucciarelli soccerm...@hotmail.com wrote: ... I receive this error: Error in moran.I.uni(eigenvector.mat[, i], mat.W, scaled = scaled, normalize = normalize, : could not find function boot Timing stopped at: 0 0 0.04

[R-sig-eco] Heat Map for species - code from Numerical Ecology with R‏

2013-07-23 Thread Valerie Mucciarelli
Hello, I am relatively new to R and I am working through the code that is provided in the book Numerical Ecology with R:http://xa.yimg.com/kq/groups/19243105/1919134110/name/Numerical.pdf (pg 79)  and I have run across an error message that I can't seem to figure out.  I am using the vegan,