Re: [R-sig-eco] measure of segregation

2013-03-11 Thread Marcelino de la Cruz
Hello, in adddtition to what Alex points, I would also recomend function K1K2 in the package ecespa: it implements differences of uivariate and bivariate Ripley's K-functions (based on spatstat) to test for aggregation and segregation of point patterns in the way suggested by Dixon (2002,

Re: [R-sig-eco] measure of segregation

2013-03-11 Thread Allen Aven
Could also take a look at the dbmss package and related publications. I recently used their M(r) function for something similar to what you describe. Marcon, E., Puech, F. Traissac, S. (2012b). Characterizing the relative spatial structure of point patterns. International Journal of Ecology,

[R-sig-eco] measure of segregation

2013-03-10 Thread Ross Ahmed
The code below shows a sample of point locations of Brent Goose on mudflats. The black points are the subspecies Dark-bellied Brent Goose, and white points the subspecies Light-bellied Brent Goose: geese - data.frame(lightLat=c(55.66735, 55.66735, 55.67341, 55.66735, 55.66735),

Re: [R-sig-eco] measure of segregation

2013-03-10 Thread Alexandre Villers
Hello, This looks like a job for point pattern statistics. Have a look at the spatstat package and the related docs. There are functions (pcfcross e.g.) to compare the spatial distribution of marked point patterns (in your case the marks will be species name). Make sure that point pattern