I saw in some forum some considerations about this topic.
Maybe I propose a brutal (perhaps incorrect?) solution; given more than two 
groups in a model subjected to permutation in adonis.....and if the global 
model is significant....
if one contrasts pairwise all possible pair comparisons between groups in a 
subset containing just those two groups one could use that as a posthoc?

Of course some p-value correction can be applied ex-post using p.adjust().

thankyou in advance for any advice
best
paolo
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