Re: [R-sig-eco] logistic regression and spatial autocorrelation

2011-08-26 Thread Nicholas Lewin-Koh
-- Message: 8 Date: Thu, 25 Aug 2011 23:22:34 +0200 From: Aitor Gast?n aitor.gas...@upm.es To: r-sig-ecology@r-project.org Subject: Re: [R-sig-eco] logistic regression and spatial autocorrelation Message-ID: 76265B51921941D6ACF52B30985497BB@botanica1 Content-Type

Re: [R-sig-eco] logistic regression and spatial autocorrelation

2011-08-26 Thread Aitor Gastón
-- From: Nicholas Lewin-Koh ni...@hailmail.net Sent: Friday, August 26, 2011 7:01 PM To: r-sig-ecology@r-project.org Subject: Re: [R-sig-eco] logistic regression and spatial autocorrelation Hi, to weigh in on this: @Aitor, Harrell's rules of thumb

Re: [R-sig-eco] logistic regression and spatial autocorrelation

2011-08-25 Thread Dunbar, Michael J.
Hi Tim You haven't really explained where your group variable in the glmm has come from. Moving from glm to glmm you've changed two things, adding the grouping and the autocorrelation as well. You have to be very careful when using the autocorrelation function. As it stands the model will

Re: [R-sig-eco] logistic regression and spatial autocorrelation

2011-08-25 Thread Tim Seipel
Thank you for the replies. To clarify, the points are generally ordered by geogrpahic distance and increasing elevation (they are a converted GPS track- spaced evenly every 200 m), though there are some ups and downs in elevation. The order of points become more difficult at high elevation.

Re: [R-sig-eco] logistic regression and spatial autocorrelation

2011-08-25 Thread Dunbar, Michael J.
-ecology@r-project.org Subject: Re: [R-sig-eco] logistic regression and spatial autocorrelation Thank you for the replies. To clarify, the points are generally ordered by geogrpahic distance and increasing elevation (they are a converted GPS track- spaced evenly every 200 m), though

Re: [R-sig-eco] logistic regression and spatial autocorrelation

2011-08-25 Thread cpar...@pdx.edu
Tim pointed put that he has only 132 samples out of 2800 with a species present and I am curious what people think about how well we can model that with logistic regression. -Chris On Aug 25, 2011, at 10:36 AM, Pedro Lima Pequeno pacol...@gmail.com wrote: Hi Tim, there are several ways

Re: [R-sig-eco] logistic regression and spatial autocorrelation

2011-08-25 Thread Aitor Gastón
-- From: cpar...@pdx.edu Sent: Thursday, August 25, 2011 8:08 PM To: Pedro Lima Pequeno pacol...@gmail.com Cc: r-sig-ecology@r-project.org; Tim Seipel t.sei...@env.ethz.ch Subject: Re: [R-sig-eco] logistic regression and spatial autocorrelation Tim pointed put that he