Dear all,
As I want to switch for my multivariate data analyses from PRIMER/PERMANOVA
to R, I am comparing all tests I am doing in the former with those
performed in the latter program, to see whether results agree.
I performed a test for the homogeneity of multivariate dispersions in both
g-ecology [mailto:r-sig-ecology-boun...@r-project.org] On
> Behalf Of Cade, Brian
> Sent: Friday, November 18, 2016 8:51 AM
> To: Ellen Pape <ellen.p...@gmail.com>
> Cc: <r-sig-ecology@r-project.org> <r-sig-ecology@r-project.org>
> Subject: Re: [R-sig-eco] Ho
Dear all,
I have recently decided to switch from Permanova/Primer to R, because the
latter is freeware (and I don't know for how long I will still have a
license). However, if I cannot seem to resolve my problem (see below), I
might have to go back to using Primer/Permanova.
If I run pairwise
Hi all,
I don't know whether this is the correct mailing group to address this
question:
I would like to perform a 2-way permanova analysis in R (using adonis in
vegan). By default you are performing sequential tests (by="terms"), so
when you have 2 or more factors, the order of these factors
iesdataset~ A *+* B,
by="margin") . Is this "allowed"?
Thanks,
Ellen
On Tue, 16 Oct 2018 at 12:01, Marcelino De La Cruz Rot <
marcelino.delac...@urjc.es> wrote:
> El 16/10/2018 a las 11:51, Ellen Pape escribió:
> > Hi all,
> >
> Maybe adonis2(specie
t;margin") would test the interaction
> alone. ~A*B unfolds to ~A+B+A:B
>
> On Tue, 16 Oct 2018 at 11:51, Ellen Pape wrote:
>
>> Hi all,
>>
>> I don't know whether this is the correct mailing group to address this
>> question:
>>
>> I would lik
what ever these mean with
> adonis) which may be something you are looking for. I haven’t checked how
> these tests were implemented, but you may do that in your leisure if you
> think this is what you want to have.
>
> Cheers, Jari Oksanen
>
> > On 16 Oct 2018, at 14:53
Hi, see my answer concerning the adonis.II below
On Wed, 24 Oct 2018 at 10:58, Marcelino De La Cruz Rot <
marcelino.delac...@urjc.es> wrote:
> El 24/10/2018 a las 10:29, Ellen Pape escribió:
> > Hello,
> >
> > Yes, but is there no way of t
e III tests..
best wishes to all,
Ellen
On Tue, 16 Oct 2018 at 12:24, Marcelino De La Cruz Rot <
marcelino.delac...@urjc.es> wrote:
> El 16/10/2018 a las 12:09, Ellen Pape escribió:
> > Hi,
> >
> > Yes, but is there no way of testing for the main effects and
> > interac
s) which may be something you are looking for. I haven’t checked how
> these tests were implemented, but you may do that in your leisure if you
> think this is what you want to have.
>
> Cheers, Jari Oksanen
>
> > On 16 Oct 2018, at 14:53 pm, Ellen Pape wrote:
> >
&g
x: +1 402 472 2946
> email: aty...@unl.edu
> http://snr.unl.edu/tyre
> http://drewtyre.rbind.io
> The point is that our true nature is not some ideal that we have to
> live up to. It’s who we are right now, and that’s what we can make friends
> with and celebrate.
> Excerpt
Hi all,
As I use ggplot2 for all my graphs, I would like to use ggplot2 to
construct rarefaction curves as well (I also want to combine 2 rarefaction
curves in 1 plot using cowplot which also vows for using ggplot2).
I made these rarefaction curves using the rarecurve function in vegan, but
I
Hi,
check out the R package "iNEXT". There's a good introduction to the
package:
https://cran.r-project.org/web/packages/iNEXT/vignettes/Introduction.html.
best wishes,
Ellen
On Mon, 23 Mar 2020 at 07:48, Luis Fernando García
wrote:
> Dear all,
>
> I hope all of you are well with the current
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