ds,
Dulce
-Mensaje original-
De: psoly...@gmail.com [mailto:psoly...@gmail.com] En nombre de Peter
Solymos
Enviado el: jueves, 09 de julio de 2009 17:25
Para: Maria Dulce Subida
CC: r-sig-ecology@r-project.org
Asunto: Re: [R-sig-eco] problem using reshape package
Hi,
something like this
Hi,
something like this might help:
## your toy data set
d <- data.frame(SITE=rep(c("I","II"), each=3),
SPECIES=rep(LETTERS[1:3], 2),
Replicate1=c(1,2,1,4,1,6),
Replicate2=c(3,5,0,2,0,3),
Replicate3=c(0,1,2,0,0,3))
## required for functions inflate, stcs and mefa
library(mefa)
#
On Thu, 2009-07-09 at 13:37 +0200, Maria Dulce Subida wrote:
> Hello everyone!
> However, when I use the same code in my real data set which is considerably
> larger (73 sites and 7 replicates for site, resulting in a molten matrix of
> 14469 x 4), the cast function does some kind of aggregation
Hi Michael,
matrify() world work if I had only one column with abundances. In my
original data frame I have 1 sample.id column, 1 taxon column but 7
abundance columns (corresponding to 7 replicates taken within each sample).
I am quite sure that the cast()function within the reshape package shou
Hi Dulce,
On Thu, Jul 9, 2009 at 7:37 AM, Maria Dulce
Subida wrote:
> Hello everyone!
>
> I'm having a problem in casting a data frame with the reshape package. I
> have an original data set of species abundances in replicate samples at
> certain sites, with the following form:
>
>
>
> SITE SPEC
Hello everyone!
I'm having a problem in casting a data frame with the reshape package. I
have an original data set of species abundances in replicate samples at
certain sites, with the following form:
SITE SPECIES Replicate1 Replicate2 Replicate3
I A 1
