On Sun, 2009-01-04 at 15:51 +0100, Peter Dalgaard wrote:
> Tom "spot" Callaway wrote:
> > On Sun, 2009-01-04 at 12:33 +0100, Peter Dalgaard wrote:
> >
> >> Finally got around to testing it (sorry, but it didn't reach testing
> >> till the 24th, and we have this thing call Christmas around here...
This looks like a change in the way the the R RPM is built, not a change
in R itself. The new RPM relies directly on external BLAS and LAPACK and
does not build its own. That is a legitimate choice, so the best course
of action is to inform RStudio.
Martyn
On Fri, 2014-05-23 at 01:19 +1000, Pet
This is a change in the way that the RPM is built. The RPM for R 3.1.0
does not build its own blas and lapack libraries, but links directly to
external blas and lapack provided by Fedora. This means that you can no
longer swap out libRblas.so by replacing it with a symbolic link to
openblas.
If y
o me, compared to 3.02 (and
> previous releases).
>
> May I suggest at some point to amend R standard docs to clarify that
> the option described is no longer viable with Linux / Fedora?
>
> Many thanks again.
>
> Enzo
>
> On 16 Jun 2014, at 11:49, Martyn Plummer wrot
On Mon, 2014-06-16 at 09:50 -0400, Tom Callaway wrote:
> On 06/16/2014 09:38 AM, Martyn Plummer wrote:
> > Something like the previous behaviour could be put in place by adding
> > the option --enable-BLAS-shlib when R is configured. Then libRblas.so
> > will be built as
Dear Tom,
The change in the Fedora RPM from using R's internal BLAS to external
BLAS means the Fedora R binary now fails one of R's regression tests,
specifically: tests/reg-BLAS.R. You can run this code by hand to verify
the issue.
As noted in the R administration and Installation Manual, "R rel
On Mon, 2014-07-07 at 10:09 -0400, Tom Callaway wrote:
> On 07/07/2014 08:15 AM, Martyn Plummer wrote:
> > Dear Tom,
> >
> > The change in the Fedora RPM from using R's internal BLAS to external
> > BLAS means the Fedora R binary now fails one of R's regressi
The primary source of RPMS for JAGS is the repository created by Lars Vilhuber:
http://download.opensuse.org/repositories/home:/cornell_vrdc/
It is true that Lars does not create RPMs for Fedora, presumably because they
do not use it at Cornell. I had not thought about this before. I do use Fedor
PM, Martyn Plummer wrote:
> > The primary source of RPMS for JAGS is the repository created by Lars
> > Vilhuber:
> > http://download.opensuse.org/repositories/home:/cornell_vrdc/
> >
> > It is true that Lars does not create RPMs for Fedora, presumably because
> > t
On Sun, 2014-12-14 at 12:56 -0800, Jeroen Ooms wrote:
> My CMD check server started failing after upgrading to Fedora 21:
>
> LaTeX errors when creating PDF version.
> This typically indicates Rd problems.
> LaTeX errors found:
> ! LaTeX Error: File `upquote.sty' not found.
>
> The problem
You don't say exactly what the problem is, but I can give you some
general advice.
The first thing to check on any RPM-based system is that you have the
appropriate development package installed, in this case gdal-devel.
I see that ELGIS does not support CentOS 7, so that might be your
problem. E
xit status
>
> The downloaded source packages are in
> ‘/tmp/Rtmpeaf9P4/downloaded_packages’
> >
>
> ---
>
> I tried to install gdal -dev and gdal but it is impossible.
>
> Regards,
> Manuel
>
>
>
>
> Martyn Plummer escr
We have had reports of the X11 device freezing. See the R bug
repository:
https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=16497
The fix will be included in the next major release of R. Tom's EPEL RPM
already contains a fix so you should perhaps try that.
Martyn
On Wed, 2016-02-17 at 11:24
On Wed, 2016-02-17 at 08:45 -0700, Steven Backus wrote:
> On Wed, 2016-02-17 at 11:24 +0900, ashutosh srivastava wrote:
>
> > > I have compiled R from source in local user account (at non default
> > > location). R seems to be working fine but issuing plot() command opens a
> > > window (supposedl
Virgo,
That message from "Ellen" is obviously spam and most likely a phishing
attempt. As list administrator there is nothing I can do about it since
they are not subscribed under that email address.
Anyway, to address your question I am on FC23 and have no problem with
the java JDK available fro
It works for me. For more information you need to download the source
package and install via
tar xfvz gmp_0.5-12.tar.gz
R CMD INSTALL gmp
Then view the contents of gmp/config.log for a more detailed error
message.
Martyn
On Wed, 2016-09-07 at 09:15 +0200, Eric J. Van der Velden wrote:
> Hello
On Thu, 2016-09-22 at 17:55 +0200, Jeroen Ooms wrote:
> On Wed, Sep 21, 2016 at 7:39 PM, Tom Callaway
> wrote:
> >
> >
> > On 09/16/2016 10:28 AM, Jeroen Ooms wrote:
> > >
> > > Where are the R docs located on EL6? It seems neither
> > > R.home("doc")
> > > nor Sys.getenv("R_DOC_DIR") exists?
>
On Wed, 2017-01-11 at 19:49 +, Weiner, Michael wrote:
> I have a Fedora linux 24 64bit workstation I am trying to install rgl
> on and I keep running into this error:
>
> trying URL 'https://cran.cnr.berkeley.edu/src/contrib/rgl_0.97.0.tar.
> gz'
> Content type 'application/x-gzip' length 2369
On Thu, 2017-01-12 at 12:29 +, Weiner, Michael wrote:
> Original Message-
> From: Martyn Plummer [mailto:plumm...@iarc.fr]
> Sent: Thursday, January 12, 2017 3:36 AM
> To: Weiner, Michael ; r-sig-fedora@r-project.org
> Subject: Re: [R-sig-Fedora] rgl
>
> >
On Thu, 2017-01-12 at 12:45 +, Weiner, Michael wrote:
> -Original Message-
> From: Martyn Plummer [mailto:plumm...@iarc.fr]
> Sent: Thursday, January 12, 2017 7:41 AM
> To: Weiner, Michael ; r-sig-fedora@r-project.org
> Subject: Re: [R-sig-Fedora] rgl
>
> >
On Tue, 2017-02-07 at 08:39 +, nw宁威 wrote:
> Hi, professors
>
> I'd like to install R-3.3.2 from .tar.gz on my linux
> system(CentOS 6.4). When installing, R told me that the version of
> zlib was too old.
Do you really need to install from source? The EPEL RPMs by Tom
Callaway from
rce.
Martyn
> Best Regards
>
> Wei Ning
> Ctrip, Shanghai
> -----邮件原件-
> 发件人: Martyn Plummer [mailto:plumm...@iarc.fr]
> 发送时间: 2017年2月7日 17:17
> 收件人: r-sig-fedora@r-project.org; nw宁威
> 主题: Re: [R-sig-Fedora] how can I know the version of my zlib checked
> by R
&g
Dear Tom,
I see that RPMS for R 3.4.0 are not successfully built on Fedora, nor
on RHEL 7.
https://koji.fedoraproject.org/koji/packageinfo?packageID=1230
When I build with mock on Fedora 25 I also get a build failure. R is
not able to establish the time zone inside the chroot and this triggers
a
On Fri, 2017-06-23 at 14:41 +, Hamidi, Bashir wrote:
> System: Red Hat Enterprise Linux Server release 6.5 (Santiago)
>
> I’m working on a RHEL6.5 cluster with no EPEL or root access to
> install EPEL.
Can't you talk to your system administrator?
> I have installed zlib 1.2.11 (and other nec
There is a binary incompatibility between FC25 and FC26 so this can
happen when you upgrade without reinstalling R
1) If you installed R from source before upgrading then rebuild and
reinstall it.
2) If you installed R from the rpmfusion repository then make sure you
have the FC26 version install
It is difficult to debug this without a reproducible example.
Do you have, in the file system that you are trying to list, files with
names that are not utf8-encoded?
Martyn
On Wed, 2017-08-23 at 13:12 +0200, Johannes Lips wrote:
> On 23.08.2017 12:02, Braun, Stefan wrote:
> > Dear list,
> >
>
I haven't upgraded yet but it looks like libgfortran.so.4 is gone in F28
[to be replaced by libgfortran.so.5].
Packages with Fortran code that you installed into your library before
upgrading will need to be reinstalled.
Martyn
On Tue, May 8, 2018 at 2:46 PM, Paul Smith wrote:
> Dear All,
>
>
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