Re: [R-sig-Geo] Help

2020-01-10 Thread Bakary Faty
Thank you very much for help,
The code works fine but when I add the shapefile of my watershed
I can not plot it.

Le ven. 10 janv. 2020 à 09:41, Micha Silver  a écrit :

>
> On 09/01/2020 21:02, Bakary Faty wrote:
> > Thank you for appreciated reply,
> >
> > I explane you exactly what I want to do with this R code attached.
> > I want to adapt this code to my data to build an isohyet map.
> > But i have some difficulties to adapt it to my case.
> > I will be very happy when you will help my to adapt this R code
> (attached)
> > to my case.
> > You can find attached the you R code and my data file.
> > Best regards
> >
>
>
> I made two small changes in your code, and it works fine:
>
>   * First I used the suggestion (earlier in this thread) to create your
> grid.
>   * Then, you had an error in your call to autoKrige.
>   * After getting that right, I created isohyetal lines with
> rasterToContour
>
> Here's my version
>
>
> library(automap)
> library(raster)
> library(rgdal)
>
> ## READ INPUT FILE
> rain_data <- read.csv(file="DATAFILE_FOR_ISOHYET.csv")
>
> point_coords <- rain_data[c("Lon","Lat")]
> coordinates(rain_data) <- point_coords
> p4str <- CRS("+init=epsg:4326")
> proj4string(rain_data) <- p4str
>
> ## CONVERTION TO UTM
> p4str_UTM <- CRS("+init=epsg:32633")
> rain_data_UTM <- spTransform(rain_data, p4str_UTM)
>
>
> bb <- bbox(rain_data_UTM)
> minx <- bb[1,1]
> maxx <- bb[1,2]
> miny <- bb[2,1]
> maxy <- bb[2,2]
>
> ## EACH PIXEL WILL BE 1000 METERS
> pixel <- 1000
> grd <- expand.grid(x=seq(minx, maxx, by=pixel), y=seq(miny, maxy,
> by=pixel))
> coordinates(grd) <- ~x+y
> gridded(grd) <- TRUE
> proj4string(grd) <- p4str_UTM
>
>
> ## KRIGING, USING AUTOKRIGE WHICH CREATES A BEST GUESS VARIOGRAM
> # OK_rain <- autoKrige(Rainfall_value ~ 1, rain_data_UTM, grd)
> # There is no variable "Rainfall_value" in your data,
> # It is called RAIN_DATA
> OK_rain = autoKrige(formula = RAIN_DATA ~1,
>  input_data = rain_data_UTM,
>  new_data = grd)
>
> ## TRASFORM TO RASTER
> rain_rast <- raster(OK_rain$krige_output)
>
> summary(rain_rast)
>
>
> # Minimumn is 540, max is 1735
> # So create isohyetal lines about every 100 mm and plot
>
> isohyets = rasterToContour(rain_rast, nlevels = 12)
> plot(rain_rast)
> lines(isohyets, add = TRUE)
>
>
> > Le jeu. 9 janv. 2020 à 18:41, Bakary Faty  > > a écrit :
> >
> > Thank you for appreciated reply,
> >
> > I explane you exactly what I want to do with this R code attached.
> > I want to adapt this code to my data to build an isohyet map.
> > But i have some difficulties to adapt it to my case.
> > I will be very happy when you will help my to adapt this R code
> > (attached)
> > to my case.
> > You can find attached the you R code, my data file and my sahefile
> > of watershed.
> >
> > Best regards
> >
> >
> > Le jeu. 9 janv. 2020 à 17:47, Ben Tupper  > > a écrit :
> >
> > Welcome to r-sig-geo!
> >
> > I don't think that you haven't provided us enough information
> > so that we can help.  On the other hand, does the example
> > below using expand.grid help?
> >
> > minx <- 20
> > maxx <- 25
> > miny <- 31
> > maxy <- 36
> > pixel <- 1
> > grd <- expand.grid(x = seq(minx, maxx, by=pixel), y =
> > seq(miny, maxy, by=pixel))
> >
> > Ben
> >
> > On Thu, Jan 9, 2020 at 11:41 AM Bakary Faty
> > mailto:bakaryf...@gmail.com>> wrote:
> >
> >
> > Dear,
> >
> > I'm writing to express my wish to join R-sig-geo list users.
> > I was doing a search on the net to know how to build an
> > isohyet map and I came across this R code.
> > However, I stumbled upon a problem from the line :
> > grd <- expand.grid(x=seq(minx, maxx, by=pixel),
> > y=seq(miny, maxy, by=pixel)),
> > I get the following error message:
> > default method not implemented for type 'S4'. I want to
> > know how resolve this error.
> >
> > Also, I would like to ask you only at the line level:
> > minx <- rain_data_UTM at bbox[1,1]
> > maxx <- rain_data_UTM at bbox[1,2]
> > miny <- rain_data_UTM at bbox[2,1]
> > maxy <- rain_data_UTM at bbox[2,2],
> > if I should limit myself to "rain_data_UTM" or write
> > completely:
> > rain_data_UTM at bbox[,].
> >  By the way, this is the pointfile I reconstructed.
> > You can find it attached to the mail.
> >
> > Thanks in advance
> >
> > Best regards
> >
> >
> >
> > Bakary
> > ___
> > R-sig-Geo mailing list
> > R-sig-Geo@r-project.org 
> >

Re: [R-sig-Geo] Help

2020-01-10 Thread Micha Silver



On 09/01/2020 21:02, Bakary Faty wrote:

Thank you for appreciated reply,

I explane you exactly what I want to do with this R code attached.
I want to adapt this code to my data to build an isohyet map.
But i have some difficulties to adapt it to my case.
I will be very happy when you will help my to adapt this R code (attached)
to my case.
You can find attached the you R code and my data file.
Best regards




I made two small changes in your code, and it works fine:

 * First I used the suggestion (earlier in this thread) to create your
   grid.
 * Then, you had an error in your call to autoKrige.
 * After getting that right, I created isohyetal lines with 
rasterToContour


Here's my version


library(automap)
library(raster)
library(rgdal)

## READ INPUT FILE
rain_data <- read.csv(file="DATAFILE_FOR_ISOHYET.csv")

point_coords <- rain_data[c("Lon","Lat")]
coordinates(rain_data) <- point_coords
p4str <- CRS("+init=epsg:4326")
proj4string(rain_data) <- p4str

## CONVERTION TO UTM
p4str_UTM <- CRS("+init=epsg:32633")
rain_data_UTM <- spTransform(rain_data, p4str_UTM)


bb <- bbox(rain_data_UTM)
minx <- bb[1,1]
maxx <- bb[1,2]
miny <- bb[2,1]
maxy <- bb[2,2]

## EACH PIXEL WILL BE 1000 METERS
pixel <- 1000
grd <- expand.grid(x=seq(minx, maxx, by=pixel), y=seq(miny, maxy, 
by=pixel))

coordinates(grd) <- ~x+y
gridded(grd) <- TRUE
proj4string(grd) <- p4str_UTM


## KRIGING, USING AUTOKRIGE WHICH CREATES A BEST GUESS VARIOGRAM
# OK_rain <- autoKrige(Rainfall_value ~ 1, rain_data_UTM, grd)
# There is no variable "Rainfall_value" in your data,
# It is called RAIN_DATA
OK_rain = autoKrige(formula = RAIN_DATA ~1,
    input_data = rain_data_UTM,
    new_data = grd)

## TRASFORM TO RASTER
rain_rast <- raster(OK_rain$krige_output)

summary(rain_rast)


# Minimumn is 540, max is 1735
# So create isohyetal lines about every 100 mm and plot

isohyets = rasterToContour(rain_rast, nlevels = 12)
plot(rain_rast)
lines(isohyets, add = TRUE)


Le jeu. 9 janv. 2020 à 18:41, Bakary Faty > a écrit :


Thank you for appreciated reply,

I explane you exactly what I want to do with this R code attached.
I want to adapt this code to my data to build an isohyet map.
But i have some difficulties to adapt it to my case.
I will be very happy when you will help my to adapt this R code
(attached)
to my case.
You can find attached the you R code, my data file and my sahefile
of watershed.

Best regards


Le jeu. 9 janv. 2020 à 17:47, Ben Tupper mailto:btup...@bigelow.org>> a écrit :

Welcome to r-sig-geo!

I don't think that you haven't provided us enough information
so that we can help.  On the other hand, does the example
below using expand.grid help?

minx <- 20
maxx <- 25
miny <- 31
maxy <- 36
pixel <- 1
grd <- expand.grid(x = seq(minx, maxx, by=pixel), y =
seq(miny, maxy, by=pixel))

Ben

On Thu, Jan 9, 2020 at 11:41 AM Bakary Faty
mailto:bakaryf...@gmail.com>> wrote:


Dear,

I'm writing to express my wish to join R-sig-geo list users.
I was doing a search on the net to know how to build an
isohyet map and I came across this R code.
However, I stumbled upon a problem from the line :
grd <- expand.grid(x=seq(minx, maxx, by=pixel),
y=seq(miny, maxy, by=pixel)),
I get the following error message:
default method not implemented for type 'S4'. I want to
know how resolve this error.

Also, I would like to ask you only at the line level:
minx <- rain_data_UTM at bbox[1,1]
maxx <- rain_data_UTM at bbox[1,2]
miny <- rain_data_UTM at bbox[2,1]
maxy <- rain_data_UTM at bbox[2,2],
if I should limit myself to "rain_data_UTM" or write
completely:
rain_data_UTM at bbox[,].
 By the way, this is the pointfile I reconstructed.
You can find it attached to the mail.

Thanks in advance

Best regards



Bakary
___
R-sig-Geo mailing list
R-sig-Geo@r-project.org 
https://stat.ethz.ch/mailman/listinfo/r-sig-geo



-- 
Ben Tupper

Bigelow Laboratory for Ocean Science
West Boothbay Harbor, Maine
http://www.bigelow.org/
https://eco.bigelow.org



-- 




Bakary



--



Bakary

___
R-sig-Geo mailing list
R-sig-Geo@r-project.org
https://stat.ethz.ch/mailman/listinfo/r-sig-geo


--
Micha Silver
Ben Gurion Univ.
Sde Boker, Remote Sensing Lab
cell: +972-523-665918
https://orcid.org/-0002-1128-1325

___