Re: [R-SIG-Mac] Issues with rj (requirement for StatET) since Mojave/3.5.1 update

2018-11-29 Thread Adrian Dușa
On Sun, Nov 25, 2018 at 9:48 PM Jonathan Greenberg wrote: > > Ok, figured it out but it was non-trivial. I found the solution here: > https://github.com/velocyto-team/velocyto.R/issues/2#issuecomment-352584213 > > TLDR you need to use homebrew (https://brew.sh/): > 1) Install homebrew as linked

Re: [R-SIG-Mac] Issues with rj (requirement for StatET) since Mojave/3.5.1 update

2018-11-29 Thread Adrian Dușa
On Thu, Nov 29, 2018 at 4:06 PM Simon Urbanek wrote: > > For posterity: both recommendations are plain wrong so don't use (obviously, the settings didn't match the installed compilers). They are not supported in the CRAN version of R which is compiled by the clang 6.0 compiler in

Re: [R-SIG-Mac] Issues with rj (requirement for StatET) since Mojave/3.5.1 update

2018-11-29 Thread Simon Urbanek
For posterity: both recommendations are plain wrong so don't use (obviously, the settings didn't match the installed compilers). They are not supported in the CRAN version of R which is compiled by the clang 6.0 compiler in /usr/local/clang6 that we supply on CRAN. You can compile your own R or

Re: [R-SIG-Mac] How to suppress message in system()

2018-11-29 Thread Simon Urbanek
See ?system in particular ignore.stdout and ignore.stderr parameters. Those are not messages and thus have nothing to do with suppressMessages(). Cheers, Simon > On Nov 29, 2018, at 9:50 AM, Christofer Bogaso > wrote: > > Hi, > > There is a function called system() with which one can run

[R-SIG-Mac] How to suppress message in system()

2018-11-29 Thread Christofer Bogaso
Hi, There is a function called system() with which one can run system code within R. But I am wondering if there is any way to suppress any message when invoking system(). For example let run 'df_dummy' through system() [yes, this is just dummy command which would throw error while invoking] >