[R-SIG-Mac] OpenFile Dialog hangs

2014-12-21 Thread Carl Witthoft
This just started out of the blue:  If I select, say, Open Recent and 
pick a file from the list, the file opens just fine.


But if I select Open,  then the dialog box opens, but the file list 
never gets filled in, I get the spinning beach ball, and never recover.


I took the precaution of turning off DefaultFolder; same problem.

I can execute SaveAs without any problem.

I am running Yosemite 10.10.1, R 3.1.2, and as I said up until 2 hours 
ago all was just fine.I even rebooted the machine and reinstalled R; 
no change.


The entire hang file (from /Library/Logs/DiagnosticReports) is huge so 
here's the top portion. PLease let me know if there is some specific 
section that could help diagnose this problem . -- or if someone would 
like me to email the zipped file.


thanks
Carl




Date/Time:   2014-12-21 13:07:11 -0500
OS Version:  10.10.1 (Build 14B25)
Architecture:x86_64
Report Version:  21

Command: R
Path:/Applications/R.app/Contents/MacOS/R
Version: R 3.1.2 GUI 1.65 Mavericks build (6833)
Parent:  launchd [1]
PID: 1010

Event:   hang
Duration:1.80s (process was unresponsive for 144 seconds before 
sampling)

Steps:   19 (100ms sampling interval)

Hardware model:  iMac9,1
Active cpus: 2

Fan speed:   1350 rpm

--
Timeline format: stacks are sorted chronologically
Use -i and -heavy to re-report with count sorting
--

Heaviest stack for the main thread of the target process:
  19  start + 1 (libdyld.dylib + 13769) [0x7fff9501b5c9]
  19  main + 819 (R + 6547) [0x10a477993]
  19  -[REngine runREPL] + 138 (R + 75898) [0x10a48887a]
  19  run_REngineRmainloop + 295 (R + 123703) [0x10a494337]
  19  ??? (FB7F246D-65AE-35E3-87A5-12D703F71C54 + 897903) [0x10a66236f]
  19  Re_ReadConsole + 185 (R + 65753) [0x10a4860d9]
  19  -[RController handleReadConsole:] + 186 (R + 26922) [0x10a47c92a]
  19  -[RController doProcessEvents:] + 221 (R + 50381) [0x10a4824cd]
  19  -[NSApplication sendEvent:] + 4035 (AppKit + 1619867) 
[0x7fff92afa79b]
  19  -[NSApplication _handleKeyEquivalent:] + 920 (AppKit + 2132165) 
[0x7fff92b778c5]
  19  -[NSMenu performKeyEquivalent:] + 359 (AppKit + 2147119) 
[0x7fff92b7b32f]
  19  _os_activity_initiate + 75 (libsystem_trace.dylib + 3287) 
[0x7fff961e3cd7]
  19  -[NSCarbonMenuImpl performActionWithHighlightingForItemAtIndex:] 
+ 114 (AppKit + 2151159) [0x7fff92b7c2f7]
  19  -[NSMenuItem _corePerformAction] + 382 (AppKit + 2151898) 
[0x7fff92b7c5da]
  19  -[NSApplication sendAction:to:from:] + 410 (AppKit + 2045079) 
[0x7fff92b62497]
  19  _os_activity_initiate + 75 (libsystem_trace.dylib + 3287) 
[0x7fff961e3cd7]

  19  -[RController openDocument:] + 194 (R + 47954) [0x10a481b52]
  19  -[NSSavePanel runModal] + 282 (AppKit + 681) [0x7fff92f42fcd]
  19  -[NSApplication runModalForWindow:] + 119 (AppKit + 3305862) 
[0x7fff92c96186]
  19  -[NSApplication _realDoModalLoop:peek:] + 666 (AppKit + 3312599) 
[0x7fff92c97bd7]
  19  -[NSApplication nextEventMatchingMask:untilDate:inMode:dequeue:] 
+ 194 (AppKit + 147072) [0x7fff92992e80]

  19  _DPSNextEvent + 964 (AppKit + 149201) [0x7fff929936d1]
  19  _BlockUntilNextEventMatchingListInModeWithFilter + 71 (HIToolbox 
+ 188411) [0x7fff97952ffb]

  19  ReceiveNextEventCommon + 179 (HIToolbox + 188606) [0x7fff979530be]
  19  RunCurrentEventLoopInMode + 235 (HIToolbox + 189503) [0x7fff9795343f]
  19  CFRunLoopRunSpecific + 296 (CoreFoundation + 464952) [0x7fff8e9ca838]
  19  __CFRunLoopRun + 872 (CoreFoundation + 466408) [0x7fff8e9cade8]
  19  __CFRunLoopDoObservers + 368 (CoreFoundation + 523488) 
[0x7fff8e9d8ce0]
  19  __CFRUNLOOP_IS_CALLING_OUT_TO_AN_OBSERVER_CALLBACK_FUNCTION__ + 
23 (CoreFoundation + 523655) [0x7fff8e9d8d87]
  19  __38-[NSApplication setWindowsNeedUpdate:]_block_invoke2508 + 76 
(AppKit + 3556895) [0x7fff92cd361f]
  19  -[NSApplication updateWindows] + 86 (AppKit + 160649) 
[0x7fff92996389]
  19  +[NSTextInputContext currentInputContext] + 140 (AppKit + 162532) 
[0x7fff92996ae4]
  19  -[FI_TListView inputContext] + 29 (FinderKit + 1312876) 
[0x7fff8b09786c]
  19  +[FI_TFloatingInputWindowController singleton] + 80 (FinderKit + 
664266) [0x7fff8aff92ca]
  19  -[FI_TFloatingInputWindow init] + 668 (FinderKit + 665781) 
[0x7fff8aff98b5]
  19  -[NSWindow _setFrameCommon:display:stashSize:] + 2801 (AppKit + 
1132460) [0x7fff92a837ac]
  19  -[NSNotificationCenter postNotificationName:object:userInfo:] + 
66 (Foundation + 11937) [0x7fff8f920ea1]

  19  _CFXNotificationPost + 3140 (CoreFoundation + 65972) [0x7fff8e9691b4]
  19  __CFNOTIFICATIONCENTER_IS_CALLING_OUT_TO_AN_OBSERVER__ + 12 
(CoreFoundation + 1174716) [0x7fff8ea77cbc]
  19  -[RDocumentWinCtrl setStatusLineText:] + 430 (R + 208030) 
[0x10a4a8c9e]
  19  -[NSRunLoop(NSRunLoop) runMode:beforeDate:] + 278 (Foundation + 
436921) [0x7fff8f988ab9]

  19  CFRunLoopRunSpecific + 296 

Re: [R-SIG-Mac] OpenFile hang; fixed not solved

2014-12-21 Thread Carl Witthoft

Pursuant to my last post:

I tracked down and deleted all the following support files, all of which 
are in  ~/Library/Preferences


org.R-project.R copy.plist
org.R-project.R.LSSharedFileList.plist
org.R-project.R.plist
org.R-project.R.savedState

R now works correctly.  I don't know which of these files was corrupted, 
so if anyone has some suggestions as to the forensic studies :-) I could 
do, I'd appreciate it.


In any case, I'm functional again.

Carl


--

Sent from a parallel universe almost, but not entirely,
nothing at all like this one.

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Re: [R-SIG-Mac] OpenFile Dialog hangs

2014-12-21 Thread Sakai Tena via R-SIG-Mac




 On Dec 21, 2014, at 1:21 PM, Carl Witthoft c...@witthoft.com wrote:
 
 This just started out of the blue:  If I select, say, Open Recent and pick 
 a file from the list, the file opens just fine.
 
 But if I select Open,  then the dialog box opens, but the file list never 
 gets filled in, I get the spinning beach ball, and never recover.
 
 I took the precaution of turning off DefaultFolder; same problem.
 
 I can execute SaveAs without any problem.
 
 I am running Yosemite 10.10.1, R 3.1.2, and as I said up until 2 hours ago 
 all was just fine.I even rebooted the machine and reinstalled R; no 
 change.
 
 The entire hang file (from /Library/Logs/DiagnosticReports) is huge so 
 here's the top portion. PLease let me know if there is some specific section 
 that could help diagnose this problem . -- or if someone would like me to 
 email the zipped file.
 
 thanks
 Carl
 
 
 
 
 Date/Time:   2014-12-21 13:07:11 -0500
 OS Version:  10.10.1 (Build 14B25)
 Architecture:x86_64
 Report Version:  21
 
 Command: R
 Path:/Applications/R.app/Contents/MacOS/R
 Version: R 3.1.2 GUI 1.65 Mavericks build (6833)
 Parent:  launchd [1]
 PID: 1010
 
 Event:   hang
 Duration:1.80s (process was unresponsive for 144 seconds before 
 sampling)
 Steps:   19 (100ms sampling interval)
 
 Hardware model:  iMac9,1
 Active cpus: 2
 
 Fan speed:   1350 rpm
 
 --
 Timeline format: stacks are sorted chronologically
 Use -i and -heavy to re-report with count sorting
 --
 
 Heaviest stack for the main thread of the target process:
  19  start + 1 (libdyld.dylib + 13769) [0x7fff9501b5c9]
  19  main + 819 (R + 6547) [0x10a477993]
  19  -[REngine runREPL] + 138 (R + 75898) [0x10a48887a]
  19  run_REngineRmainloop + 295 (R + 123703) [0x10a494337]
  19  ??? (FB7F246D-65AE-35E3-87A5-12D703F71C54 + 897903) [0x10a66236f]
  19  Re_ReadConsole + 185 (R + 65753) [0x10a4860d9]
  19  -[RController handleReadConsole:] + 186 (R + 26922) [0x10a47c92a]
  19  -[RController doProcessEvents:] + 221 (R + 50381) [0x10a4824cd]
  19  -[NSApplication sendEvent:] + 4035 (AppKit + 1619867) [0x7fff92afa79b]
  19  -[NSApplication _handleKeyEquivalent:] + 920 (AppKit + 2132165) 
 [0x7fff92b778c5]
  19  -[NSMenu performKeyEquivalent:] + 359 (AppKit + 2147119) [0x7fff92b7b32f]
  19  _os_activity_initiate + 75 (libsystem_trace.dylib + 3287) 
 [0x7fff961e3cd7]
  19  -[NSCarbonMenuImpl performActionWithHighlightingForItemAtIndex:] + 114 
 (AppKit + 2151159) [0x7fff92b7c2f7]
  19  -[NSMenuItem _corePerformAction] + 382 (AppKit + 2151898) 
 [0x7fff92b7c5da]
  19  -[NSApplication sendAction:to:from:] + 410 (AppKit + 2045079) 
 [0x7fff92b62497]
  19  _os_activity_initiate + 75 (libsystem_trace.dylib + 3287) 
 [0x7fff961e3cd7]
  19  -[RController openDocument:] + 194 (R + 47954) [0x10a481b52]
  19  -[NSSavePanel runModal] + 282 (AppKit + 681) [0x7fff92f42fcd]
  19  -[NSApplication runModalForWindow:] + 119 (AppKit + 3305862) 
 [0x7fff92c96186]
  19  -[NSApplication _realDoModalLoop:peek:] + 666 (AppKit + 3312599) 
 [0x7fff92c97bd7]
  19  -[NSApplication nextEventMatchingMask:untilDate:inMode:dequeue:] + 194 
 (AppKit + 147072) [0x7fff92992e80]
  19  _DPSNextEvent + 964 (AppKit + 149201) [0x7fff929936d1]
  19  _BlockUntilNextEventMatchingListInModeWithFilter + 71 (HIToolbox + 
 188411) [0x7fff97952ffb]
  19  ReceiveNextEventCommon + 179 (HIToolbox + 188606) [0x7fff979530be]
  19  RunCurrentEventLoopInMode + 235 (HIToolbox + 189503) [0x7fff9795343f]
  19  CFRunLoopRunSpecific + 296 (CoreFoundation + 464952) [0x7fff8e9ca838]
  19  __CFRunLoopRun + 872 (CoreFoundation + 466408) [0x7fff8e9cade8]
  19  __CFRunLoopDoObservers + 368 (CoreFoundation + 523488) [0x7fff8e9d8ce0]
  19  __CFRUNLOOP_IS_CALLING_OUT_TO_AN_OBSERVER_CALLBACK_FUNCTION__ + 23 
 (CoreFoundation + 523655) [0x7fff8e9d8d87]
  19  __38-[NSApplication setWindowsNeedUpdate:]_block_invoke2508 + 76 (AppKit 
 + 3556895) [0x7fff92cd361f]
  19  -[NSApplication updateWindows] + 86 (AppKit + 160649) [0x7fff92996389]
  19  +[NSTextInputContext currentInputContext] + 140 (AppKit + 162532) 
 [0x7fff92996ae4]
  19  -[FI_TListView inputContext] + 29 (FinderKit + 1312876) [0x7fff8b09786c]
  19  +[FI_TFloatingInputWindowController singleton] + 80 (FinderKit + 664266) 
 [0x7fff8aff92ca]
  19  -[FI_TFloatingInputWindow init] + 668 (FinderKit + 665781) 
 [0x7fff8aff98b5]
  19  -[NSWindow _setFrameCommon:display:stashSize:] + 2801 (AppKit + 1132460) 
 [0x7fff92a837ac]
  19  -[NSNotificationCenter postNotificationName:object:userInfo:] + 66 
 (Foundation + 11937) [0x7fff8f920ea1]
  19  _CFXNotificationPost + 3140 (CoreFoundation + 65972) [0x7fff8e9691b4]
  19  __CFNOTIFICATIONCENTER_IS_CALLING_OUT_TO_AN_OBSERVER__ + 12 
 (CoreFoundation + 1174716) [0x7fff8ea77cbc]
  19  -[RDocumentWinCtrl setStatusLineText:] + 430 (R + 208030) [0x10a4a8c9e]