Re: [R-SIG-Mac] R 3.6.3 for MacOS

2020-03-05 Thread Simon Urbanek
Lori,

as posted here earlier[1], Apple has tightened notarization requirements this 
year making it impossible for current R releases to be notarized until R 4.0.0 
and thus the last Apple-notarized release is R 3.6.2.

If you are on a macOS version that doesn't require notarization, then I have 
put a binary that is not notarized in
https://mac.R-project.org/bin/macosx/el-capitan/base/R-3.6.3.nn.pkg
SHA1(R-3.6.3.nn.pkg)= c462c9b1f9b45d778f05b8d9aa25a9123b3557c4

I am currently investigating if we can enable the required restrictions on 
binaries and what implications for the functionality of R that will have and 
will keep you posted. 

Cheers,
Simon


[1] - https://stat.ethz.ch/pipermail/r-sig-mac/2019-October/013100.html


> On 6/03/2020, at 6:39 AM, Shepherd, Lori  
> wrote:
> 
> Is there any update on when R 3.6.3 will be available for download from  
> https://cloud.r-project.org/bin/macosx/ ?
> It seems like there was a release of R 3.6.3 for linux and windows on 
> February 29th that is available but nothing yet for Mac.
> 
> 
> 
> Lori Shepherd
> 
> Bioconductor Core Team
> 
> Roswell Park Comprehensive Cancer Center
> 
> Department of Biostatistics & Bioinformatics
> 
> Elm & Carlton Streets
> 
> Buffalo, New York 14263
> 
> 
> This email message may contain legally privileged and/or confidential 
> information.  If you are not the intended recipient(s), or the employee or 
> agent responsible for the delivery of this message to the intended 
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> distribution, or use of this email message is prohibited.  If you have 
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>   [[alternative HTML version deleted]]
> 
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Re: [R-SIG-Mac] R 3.6.3 for MacOS

2020-03-05 Thread Shepherd, Lori
Yes.  We are aware of the developer binaries but were looking for an update on 
the official R 3.6.3 release for mac os.


Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263


From: Patrick Schratz 
Sent: Thursday, March 5, 2020 12:52 PM
To: r-sig-mac@r-project.org ; Shepherd, Lori 

Subject: Re: [R-SIG-Mac] R 3.6.3 for MacOS

You can use the installer/binaries from the R developer page in the meantime: 
https://mac.r-project.org/
Am 5. M�rz 2020, 18:39 +0100 schrieb Shepherd, Lori 
:
Is there any update on when R 3.6.3 will be available for download from 
https://cloud.r-project.org/bin/macosx/ ?
It seems like there was a release of R 3.6.3 for linux and windows on February 
29th that is available but nothing yet for Mac.



Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263


This email message may contain legally privileged and/or confidential 
information. If you are not the intended recipient(s), or the employee or agent 
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are hereby notified that any disclosure, copying, distribution, or use of this 
email message is prohibited. If you have received this message in error, please 
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computer. Thank you.
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Re: [R-SIG-Mac] R 3.6.3 for MacOS

2020-03-05 Thread Patrick Schratz
You can use the installer/binaries from the R developer page in the meantime: 
https://mac.r-project.org/
Am 5. März 2020, 18:39 +0100 schrieb Shepherd, Lori 
:
> Is there any update on when R 3.6.3 will be available for download from 
> https://cloud.r-project.org/bin/macosx/ ?
> It seems like there was a release of R 3.6.3 for linux and windows on 
> February 29th that is available but nothing yet for Mac.
>
>
>
> Lori Shepherd
>
> Bioconductor Core Team
>
> Roswell Park Comprehensive Cancer Center
>
> Department of Biostatistics & Bioinformatics
>
> Elm & Carlton Streets
>
> Buffalo, New York 14263
>
>
> This email message may contain legally privileged and/or confidential 
> information. If you are not the intended recipient(s), or the employee or 
> agent responsible for the delivery of this message to the intended 
> recipient(s), you are hereby notified that any disclosure, copying, 
> distribution, or use of this email message is prohibited. If you have 
> received this message in error, please notify the sender immediately by 
> e-mail and delete this email message from your computer. Thank you.
> [[alternative HTML version deleted]]
>
> ___
> R-SIG-Mac mailing list
> R-SIG-Mac@r-project.org
> https://stat.ethz.ch/mailman/listinfo/r-sig-mac

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[R-SIG-Mac] R 3.6.3 for MacOS

2020-03-05 Thread Shepherd, Lori
Is there any update on when R 3.6.3 will be available for download from  
https://cloud.r-project.org/bin/macosx/ ?
It seems like there was a release of R 3.6.3 for linux and windows on February 
29th that is available but nothing yet for Mac.



Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263


This email message may contain legally privileged and/or confidential 
information.  If you are not the intended recipient(s), or the employee or 
agent responsible for the delivery of this message to the intended 
recipient(s), you are hereby notified that any disclosure, copying, 
distribution, or use of this email message is prohibited.  If you have received 
this message in error, please notify the sender immediately by e-mail and 
delete this email message from your computer. Thank you.
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Re: [R-SIG-Mac] colors from RGui in RStudio

2020-03-05 Thread peter dalgaard
Neither does any of the rest of us, I expect... 

My guess is that first you need to 

- figure out how to edit RStudio themes. Some hints here

https://support.rstudio.com/hc/en-us/articles/115011846747-Using-RStudio-Themes

It is not completely transparent how to proceed (e.g., where are the existing 
themes stored??),
but it looks like the standard themes are accessible if you take the hint and 
enter the online tmThemes editor.

- figure out which elements in RGui correspond to which elements in RStudio

- figure out how to translate the colors. I would expect that the 
colorWithDeviceRed are easy conversions to
hex code (multiply by 255, round, and use sprintf("%X", ...), for instance), 
after which you can just type them in. 
E.g.,

colorWithDeviceRed:0.025 green:0.085 blue:0.600 alpha:1.0]

should become #061699

Dunno about colorWithCalibrated...


-pd

> On 5 Mar 2020, at 08:36 , Ivan Calandra  wrote:
> 
> Hi Simon,
> 
> I do not know how I should use that...?
> Any more hint?
> 
> Thanks!
> Ivan
> 
> --
> Dr. Ivan Calandra
> TraCEr, laboratory for Traceology and Controlled Experiments
> MONREPOS Archaeological Research Centre and
> Museum for Human Behavioural Evolution
> Schloss Monrepos
> 56567 Neuwied, Germany
> +49 (0) 2631 9772-243
> https://www.researchgate.net/profile/Ivan_Calandra
> 
> On 04/03/2020 23:15, Simon Urbanek wrote:
>> Mac-GUI$ grep -i colorWith *.m | grep -v //
>> FoldingSignTextAttachmentCell.m: [[col colorWithAlphaComponent:0.6f] 
>> setFill];
>> NoodleLineNumberView.m:  normalBackgroundColor = [[NSColor 
>> colorWithCalibratedWhite: 0.95 alpha: 1.0] retain];
>> NoodleLineNumberView.m:  foldedBackgroundColor = [[NSColor 
>> colorWithCalibratedWhite: 0.85 alpha: 1.0] retain];
>> NoodleLineNumberView.m:  return [NSColor 
>> colorWithCalibratedWhite:0.42 alpha:1.0];
>> RController.m:   [NSColor redColor], [NSColor grayColor], 
>> [NSColor purpleColor], [NSColor colorWithCalibratedRed:0.71f green:0.835f 
>> blue:1.0f alpha:1.0f], nil];
>> RController.m:   [attr setObject:[Preferences 
>> unarchivedObjectForKey:selectionColorKey withDefault:[NSColor 
>> colorWithCalibratedRed:0.71f green:0.835f blue:1.0f alpha:1.0f]] 
>> forKey:NSBackgroundColorAttributeName];
>> RScriptEditorTextView.m: else shColorNormal=[NSColor 
>> colorWithDeviceRed:0.025 green:0.085 blue:0.600 alpha:1.0];
>> RScriptEditorTextView.m: else shColorString=[NSColor 
>> colorWithDeviceRed:0.690 green:0.075 blue:0.000 alpha:1.0];
>> RScriptEditorTextView.m: else shColorNumber=[NSColor 
>> colorWithDeviceRed:0.020 green:0.320 blue:0.095 alpha:1.0];
>> RScriptEditorTextView.m: else shColorKeyword=[NSColor 
>> colorWithDeviceRed:0.765 green:0.535 blue:0.035 alpha:1.0];
>> RScriptEditorTextView.m: else shColorComment=[NSColor 
>> colorWithDeviceRed:0.312 green:0.309 blue:0.309 alpha:1.0];
>> RScriptEditorTextView.m: else shColorIdentifier=[NSColor 
>> colorWithDeviceRed:0.0 green:0.0 blue:0.0 alpha:1.0];
>> RScriptEditorTextView.m: if (!c) c=[NSColor colorWithDeviceRed:0.71f 
>> green:0.835f blue:1.0f alpha:1.0f];
>> RScriptEditorTextView.m: else shColorBackground=[NSColor 
>> colorWithDeviceRed:1.0 green:1.0 blue:1.0 alpha:1.0];
>> RScriptEditorTextView.m: else shColorCurrentLine=[NSColor 
>> colorWithDeviceRed:0.9 green:0.9 blue:0.9 alpha:0.8];
>> RTextView.m: frameColor = [Preferences 
>> unarchivedObjectForKey:selectionColorKey withDefault:[NSColor 
>> colorWithCalibratedRed:0.71f green:0.835f blue:1.0f alpha:1.0f]];
>> RTextView.m: frameColor = [Preferences 
>> unarchivedObjectForKey:editorSelectionBackgroundColorKey 
>> withDefault:[NSColor colorWithCalibratedRed:0.71f green:0.835f blue:1.0f 
>> alpha:1.0f]];
>> RTextView.m: bgColor = [frameColor colorWithAlphaComponent:0.4];
>> 
>> 
>> 
>>> On 4/03/2020, at 11:49 PM, Duncan Murdoch  wrote:
>>> 
>>> On 04/03/2020 3:08 a.m., Ivan Calandra wrote:
 Dear Mac useRs,
 When I was still working on Mac, I used to love the RGui, partly because
 of the color codes. Now that I work on Windows, I use R through RStudio
 but cannot find a color theme that gives the same colors as the Mac
 RGui. I am not very familiar with CSS styles so I don't think I can
 create one myself.
 But I thought the Mac CSS style might be available somewhere, and that I
 could use it in RStudio.
>>> The Mac R.app sources are available from 
>>> https://cran.r-project.org/bin/macosx/Mac-GUI-1.70.tar.gz.  However, I 
>>> don't understand Cocoa apps enough to know where to look for the default 
>>> colors.
>>> 
>>> Duncan Murdoch
>>> 
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